SPAAM-Community
Published October 8, 2024 | Version v24.09.0
Software Open

SPAAM-community/AncientMetagenomeDir: v24.09.0: Medieval Town of Toruń

Creators

  • 1. HKI Jena, MPI-EVA Leipzig
  • 2. Max Planck Institute for Evolutionary Anthropology
  • 3. Max Planck institute for Evolutionary Anthropology
  • 4. Stockholm University
  • 5. LIIGH
  • 6. Utrecht University
  • 7. University of Otago
  • 8. Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie - HKI
  • 9. Leibniz Institute for Natural Product Research and Infection Biology, Jena
  • 10. University of Texas at Austin
  • 11. Max Planck Institute for the Science of Human History
  • 12. TU Delft
  • 13. Uppsala University

Description

Release v24.09.0 includes 4 new publications, representing 109 new ancient host-associated metagenome samples, 12 new ancient microbial genomes, and 11 new ancient environmental samples. This brings the repository to a total of 196 publications, 1540 ancient host-associated metagenome samples, 718 ancient microbial genomes, and 713 ancient environmental samples

Furthermore, this release adds 109 new ancient host-associated metagenome libraries, 6 new ancient microbial genome libraries, and 10 new ancient environmental libraries. This brings the repository to a total of 2670 ancient host-associated metagenome libraries, 3112 ancient microbial genomes libraries, and 822 ancient environmental libraries.

Added

Ancient Metagenome: Host Associated

  • Austin 2024 10.1038/s41598-024-64818-7 (added by @alexhbnr and @jfy133)
  • Bozzi 2024 10.1038/s41598-023-40246-x (added by @DavideBozzi and @alexhbnr)

Ancient Single Genome: Host Associated

  • White 2021 10.3390/biology10121324 (added by @DianaSpurite, @jfy133, and @alexhbnr)

Ancient Metagenome: Environmental

  • Zampirolo 2024 10.1016/j.cub.2024.08.047 (added by @GiuliaZ538)

Changed

  • Fix archive sample accession codes for Liu 2024 10.1126/sciadv.adn8490 (@alexhbnr)
  • Update the data_publication_doi of Lebrasseur 2024 10.1093/ve/vead087 (@alexhbnr)

Medieval Town of Toruń

Torun owes its origins to the Teutonic Order, which built a castle there in the mid-13th century as a base for the conquest and evangelization of Prussia. It soon developed a commercial role as part of the Hanseatic League. In the Old and New Town, the many imposing public and private buildings from the 14th and 15th centuries (among them the house of Copernicus) are striking evidence of Torun's importance.

Description is available under license CC-BY-SA IGO 3.0

Files

SPAAM-community/AncientMetagenomeDir-v24.09.0.zip

Files (23.8 MB)

Additional details

Related works

Is supplement to
Software: https://github.com/SPAAM-community/AncientMetagenomeDir/tree/v24.09.0 (URL)