Preview

ageml-0.2.0
- .github
  - workflows
    - lint_test_coverage.yml
      
      926 Bytes
- .gitignore
  
  3.2 kB
- .pre-commit-config.yaml
  
  419 Bytes
- Dockerfile
  
  323 Bytes
- Dockerfile_latest
  
  457 Bytes
- LICENSE
  
  10.2 kB
- NOTICE
  
  201 Bytes
- README.md
  
  7.6 kB
- bin
  - scripts
    - .gitkeep
      
      0 Bytes
    - debug_classify.py
      
      95 Bytes
    - debug_clinical.py
      
      93 Bytes
    - debug_factors.py
      
      96 Bytes
    - debug_model_age.py
      
      86 Bytes
    - generate_synthetic_data.py
      
      201 Bytes
- docs
  - CONTRIBUTING.md
    
    5.5 kB
  - TUTORIAL.md
    
    15.7 kB
  - available_models.md
    
    1.7 kB
  - input_file_specification.md
    
    3.6 kB
- noxfile.py
  
  740 Bytes
- poetry.lock
  
  165.1 kB
- pyproject.toml
  
  2.5 kB
- resources
  - .gitkeep
    
    0 Bytes
  - figs
    - pipeline.png
      
      640.9 kB
    - tutorial
      - clinical_classify
        
        cn
        
        roc_curve_g1_vs_g2_all.png
        
        36.3 kB
        
        roc_curve_g1_vs_g2_system_a.png
        
        38.2 kB
        
        roc_curve_g1_vs_g2_system_b.png
        
        38.3 kB
        
        each
        
        roc_curve_g1_vs_g2_all.png
        
        37.3 kB
        
        roc_curve_g1_vs_g2_system_a.png
        
        38.9 kB
        
        roc_curve_g1_vs_g2_system_b.png
        
        38.7 kB
      - clinical_groups
        
        age_distribution_clinical_groups.png
        
        21.5 kB
        
        clinical_groups_box_plot_system_a.png
        
        42.2 kB
      - factor_correlation
        
        factors_vs_deltas_g1.png
        
        57.0 kB
      - model_age
        
        age_bias_correction_0_system_A.png
        
        65.6 kB
        
        age_distribution_controls.png
        
        20.1 kB
        
        chronological_vs_pred_age_0_system_A.png
        
        52.0 kB
        
        features_vs_age_controls_system_A.png
        
        147.4 kB
- setup.cfg
  
  1.1 kB
- src
  - ageml
    - __init__.py
      
      213 Bytes
    - __main__.py
      
      151 Bytes
    - commands.py
      
      13.7 kB
    - datasets
      - .gitkeep
        
        0 Bytes
      - __init__.py
        
        261 Bytes
      - generate_synthetic_data.py
        
        561 Bytes
      - synthetic_data.py
        
        10.5 kB
      - toy_clinical.csv
        
        20.9 kB
      - toy_covar.csv
        
        24.4 kB
      - toy_factors.csv
        
        62.8 kB
      - toy_features.csv
        
        248.2 kB
      - toy_systems.txt
        
        56 Bytes
    - messages.py
      
      7.0 kB
    - modelling.py
      
      24.0 kB
    - processing.py
      
      2.4 kB
    - ui.py
      
      73.9 kB
    - utils.py
      
      3.1 kB
    - visualizer.py
      
      12.2 kB
- tests
  - __init__.py
    
    0 Bytes
  - test_ageml
    - __init__.py
      
      0 Bytes
    - test_commands.py
      
      7.3 kB
    - test_datasets.py
      
      1.1 kB
    - test_modelling.py
      
      3.7 kB
    - test_processing.py
      
      2.4 kB
    - test_ui.py
      
      62.5 kB
    - test_utils.py
      
      2.4 kB
    - test_visualizer.py
      
      4.8 kB

ageml-0.2.0.zip