Published September 20, 2024 | Version 1.0.0
Dataset Open

Data and code related to "Difficult control is related to instability in biologically inspired Boolean networks"

  • 1. Arizona State University

Description

This repository contains data and code related to the publication "Difficult control is related to instability in biologically inspired Boolean networks" by Bryan C. Daniels and Enrico Borriello.

The python code in the `isolated_fixed_points_code` directory can be used to recreate all results in the paper.  See the README.md file in the `isolated_fixed_points_code` directory for more information about how to run the code.

The files `240916_cell_collective_ck_and_isolated_fp_data.csv`, `240916_iowa_database_ck_and_isolated_fp_data.csv`, and `240916_random_ck_and_isolated_fp_data.csv` contain data about the networks analyzed in the paper, including the number of attractors and mean control kernel size of each network.

Files

240916_cell_collective_ck_and_isolated_fp_data.csv

Files (30.6 MB)

Name Size Download all
md5:e9eaae5c01357a35cd4705699ca528a6
3.0 kB Preview Download
md5:818951f5e274cf24a81acfa56d8ead98
2.3 kB Preview Download
md5:336a4a86421f23a9144aa8655f3db140
21.2 kB Preview Download
md5:cac7155686b80aad627d0c730454cee7
30.6 MB Preview Download

Additional details

Related works

Is supplement to
Preprint: arXiv:2402.18757 (arXiv)

Software

Programming language
Python, Jupyter Notebook