Published August 23, 2024
| Version v1
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AutoPeptideML_SI
Creators
-
1.
University College Dublin
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2.
IBM Research - Ireland
-
3.
National University of Quilmes
- 4. University of KwaZulu-Natal - Westville Campus
Description
Introduction
This directory contains supplementary information to the paper: "AutoPeptideML: A study on how to build more trustworthy peptide bioactivity predictors".
Contents
1. AutoPeptideML
Version 1.0.0 of AutoPeptideML stored here for archival purposes.
2. Models
This directory contains the models generated in one of the runs of AutoPeptideML with the NegSearch+HP datasets. The output also contains both the splits used for training the model with the independent train/test subsets and the 10-folds used for cross-validation.
3. Figures
A notebook `get_propeties.ipynb` with the code used for calculating the physico-chemical properties of the peptides is also included.
Files
Files
(498.7 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:e97be44c25a1237680e17be7cdbdfd6a
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498.7 MB | Download |
Additional details
Software
- Repository URL
- https://github.com/IBM/AutoPeptideML