FastQCFastQC Report
Tue 14 Jun 2022
SRR14995044.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR14995044.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences540742
Sequences flagged as poor quality0
Sequence length1-15873
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATTGTGTTTGTTAGTCGCTATGGCTGTCTCTAAAGTTTACGCTAGATC19390.35858135672834734No Hit
AGATTGTGTTTGTTAGTCGCTATGGCTGTCTAAAGTTTACGCTAGATCCG9540.17642424668326115No Hit
CCAGCTAGATCCGAAAGATTGGCTAAGTTGAACCAATTGTTGAGAATCGA8300.15349279323596096No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)