Contig	11B-T1-3 Read Count	11B-T1-6 Read Count	11B-T1-9 Read Count	8-T1-3 Read Count	8-T1-6 Read Count	8-T1-9 Read Count	Ex45-T1-3 Read Count	Ex45-T1-6 Read Count	Ex45-T1-9 Read Count	HP-T1-3 Read Count	HP-T1-6 Read Count	HP-T1-9 Read Count	RC-T1-3 Read Count	RC-T1-6 Read Count	RC-T1-9 Read Count	RP-T1-3 Read Count	RP-T1-6 Read Count	RP-T1-9 Read Count	SC-T1-3 Read Count	SC-T1-6 Read Count	SC-T1-9 Read Count	UAB-T1-3 Read Count	UAB-T1-6 Read Count	UAB-T1-9 Read Count
HP-T1-6_contig.fa_viral_105	0	0	0	0	0	0	0	0	0	0	116	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_106	35	13	5	8	11	15	10	8	5	37	90	50	13	11	2	7	42	31	9	8	12	12	20	18
HP-T1-6_contig.fa_viral_107	95	152	150	153	116	204	107	126	133	191	256	88	50	83	64	232	55	94	133	149	160	120	151	102
HP-T1-6_contig.fa_viral_108	2	1	0	0	0	1	0	0	1	59	137	94	0	0	0	9	33	21	0	0	0	0	10	6
HP-T1-6_contig.fa_viral_109	0	0	0	0	0	0	0	0	1	0	123	24	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_110	0	0	0	0	0	0	1	1	0	0	113	0	0	0	0	0	0	0	4	2	2	0	8	0
HP-T1-6_contig.fa_viral_111	0	3	0	0	0	20	2	4	21	8	68	11	0	0	0	20	0	5	9	2	5	1	4	1
HP-T1-6_contig.fa_viral_112	0	0	1	0	0	2	0	1	0	0	107	1	0	0	1	0	1	0	1	0	0	1	1	2
HP-T1-6_contig.fa_viral_113	0	0	0	0	0	0	0	0	2	31	98	19	0	0	0	11	1	1	0	0	3	0	0	0
HP-T1-6_contig.fa_viral_115	0	0	0	0	0	0	0	0	0	1	244	671	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_116	0	0	0	0	0	0	0	0	0	0	99	6	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_117	0	0	0	0	0	0	0	0	18	57	126	8	0	0	0	102	0	7	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_118	0	0	0	0	0	0	0	0	0	0	164	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_119	91	54	12	44	10	31	18	15	7	82	185	268	10	23	18	177	508	246	34	12	7	13	97	62
HP-T1-6_contig.fa_viral_120	0	0	0	0	0	0	0	0	0	0	88	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_121	0	0	0	0	0	0	0	0	0	0	97	0	0	0	0	1	0	1	0	0	0	0	0	1
HP-T1-6_contig.fa_viral_122	0	2	3	2	0	2	3	13	11	95	107	119	0	0	0	377	14	44	5	3	9	4	3	1
HP-T1-6_contig.fa_viral_123	0	0	0	0	0	0	0	1	0	0	622	3	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_124	0	0	0	0	0	0	0	0	0	0	147	1	0	1	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_125	0	0	0	0	0	0	0	0	0	0	105	1	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_126	3	5	4	2	3	11	3	2	12	118	150	30	0	0	0	231	20	30	2	5	4	5	8	5
HP-T1-6_contig.fa_viral_127	0	0	0	0	0	0	0	0	0	0	77	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_128	1	0	0	0	0	0	0	0	2	0	94	0	0	0	0	0	0	0	0	0	0	0	3	0
HP-T1-6_contig.fa_viral_129	0	0	0	0	0	0	1	0	0	10	92	35	0	0	0	1	0	0	0	1	0	0	0	0
HP-T1-6_contig.fa_viral_130	0	0	0	0	0	0	0	0	0	0	103	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_131	0	0	0	0	0	0	0	0	0	8	75	29	0	0	0	0	0	0	0	0	1	0	0	0
HP-T1-6_contig.fa_viral_132	30	42	25	22	16	30	13	17	32	49	113	70	18	13	13	66	71	70	23	26	15	17	48	27
HP-T1-6_contig.fa_viral_133	1	0	0	0	0	0	0	0	1	270	72	37	0	0	0	177	12	31	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_134	0	0	0	0	0	0	0	0	0	71	101	6	0	0	0	59	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_135	0	0	0	0	0	0	0	0	0	0	80	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_136	0	0	0	0	0	0	0	0	4	111	72	77	0	0	0	280	17	17	0	1	10	0	1	0
HP-T1-6_contig.fa_viral_137	0	0	0	0	0	0	0	0	0	2	1126	8	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_138	0	0	0	0	0	0	0	0	0	0	123	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_139	1	0	0	0	0	1	0	1	1	0	156	509	0	0	0	1	0	0	0	0	0	1	0	0
HP-T1-6_contig.fa_viral_140	0	0	0	0	0	0	0	0	0	0	118	32	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_141	0	0	0	0	0	0	0	0	0	0	87	76	0	0	0	0	0	2	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_142	1	0	0	0	0	0	1	1	0	4	131	93	0	0	0	2	0	8	0	1	1	1	0	0
HP-T1-6_contig.fa_viral_143	0	0	0	0	0	0	0	0	0	0	204	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_144	0	0	0	0	0	0	0	0	0	0	95	94	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_145	184	313	259	315	211	386	201	217	212	304	395	222	150	105	107	400	134	151	269	236	207	252	358	196
HP-T1-6_contig.fa_viral_146	0	1	0	0	0	0	0	3	0	0	175	3	0	0	0	1	0	0	5	2	0	0	0	2
HP-T1-6_contig.fa_viral_147	0	0	0	0	0	0	0	0	0	0	340	179	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_148	0	0	0	0	0	0	0	0	0	0	209	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_149	109	145	109	94	59	85	64	88	47	87	146	98	168	128	76	197	254	137	135	69	33	64	172	118
HP-T1-6_contig.fa_viral_150	0	0	0	0	0	0	0	0	0	10	139	42	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_151	0	0	0	0	0	0	0	1	0	0	846	4	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_152	1	0	0	0	0	0	0	0	0	1	153	0	0	0	0	1	1	0	1	0	0	2	0	0
HP-T1-6_contig.fa_viral_153	0	2	1	2	0	6	1	0	15	2	53	2	0	0	0	4	1	10	4	10	1	3	9	0
HP-T1-6_contig.fa_viral_154	0	0	0	0	0	0	0	0	0	0	186	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_155	0	0	0	0	0	0	0	1	0	5	233	530	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_156	10	4	1	6	6	5	3	4	9	21	100	53	2	4	2	18	21	14	10	5	8	1	6	3
HP-T1-6_contig.fa_viral_157	1	2	1	0	4	4	1	1	2	1	111	2	0	0	0	4	2	0	4	1	0	0	2	3
HP-T1-6_contig.fa_viral_158	0	0	0	0	0	0	0	0	0	0	103	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_159	0	0	0	0	0	0	0	0	0	0	218	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_160	0	1	1	0	0	0	0	0	0	88	113	0	0	0	0	1	0	0	1	0	1	0	0	0
HP-T1-6_contig.fa_viral_161	0	2	4	4	6	9	3	11	75	23	83	0	0	0	0	11	0	0	1	12	8	10	2	2
HP-T1-6_contig.fa_viral_162	160	243	149	167	145	314	125	172	216	307	431	441	110	108	134	589	157	152	243	200	224	200	261	176
HP-T1-6_contig.fa_viral_163	0	0	0	0	0	0	0	0	0	0	723	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_164	26	24	29	32	18	32	43	28	27	16	82	148	16	15	12	46	28	22	35	29	31	30	72	30
HP-T1-6_contig.fa_viral_165	0	0	0	0	0	0	0	1	19	74	150	8	0	0	0	155	2	17	0	2	12	2	1	0
HP-T1-6_contig.fa_viral_166	29	41	46	74	35	77	63	65	103	189	168	176	27	46	18	623	68	87	78	95	144	53	95	38
HP-T1-6_contig.fa_viral_167	0	1	2	1	5	6	2	1	1	1	64	6	2	1	2	3	3	3	5	2	0	2	8	4
HP-T1-6_contig.fa_viral_168	0	0	0	0	0	0	0	0	0	0	149	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_169	0	0	0	0	0	1	0	0	0	0	82	40	0	0	0	0	0	2	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_170	0	0	0	0	0	0	0	0	0	0	189	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_171	0	1	1	0	1	0	1	0	0	2	216	44	0	0	1	1	1	1	0	2	1	0	3	2
HP-T1-6_contig.fa_viral_172	0	0	0	0	0	0	0	0	0	0	112	3	0	0	0	1	0	2	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_173	82	73	41	76	25	68	52	29	40	69	125	151	32	42	22	153	206	128	68	35	46	39	134	76
HP-T1-6_contig.fa_viral_174	0	0	0	0	0	0	0	0	0	0	346	6	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_175	0	0	0	0	0	0	0	0	0	0	310	0	0	0	0	0	0	0	0	0	0	0	0	0
SC-T1-6_contig.fa_viral_4	1	1	1	9	6	28	4	12	7	5	2	1	1	0	0	0	1	0	9	99	25	16	33	30
SC-T1-6_contig.fa_viral_5	10	44	75	29	15	87	81	80	54	14	10	6	5	14	2	13	3	4	158	173	132	33	61	39
SC-T1-6_contig.fa_viral_6	6	18	30	9	0	11	29	45	7	0	4	2	2	0	0	0	2	1	15	71	43	8	30	9
SC-T1-6_contig.fa_viral_7	0	0	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	66	66	105	0	0	2
SC-T1-6_contig.fa_viral_8	3	24	50	16	9	34	22	22	0	0	0	0	8	4	1	1	0	0	52	186	25	16	13	9
SC-T1-6_contig.fa_viral_9	1	1	0	0	1	0	6	3	0	0	1	0	0	0	0	0	0	0	0	124	50	1	0	2
SC-T1-6_contig.fa_viral_10	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	59	0	0	0	0
SC-T1-6_contig.fa_viral_11	0	0	1	1	0	1	0	3	0	0	2	0	0	0	0	0	0	0	2	67	0	1	0	1
SC-T1-6_contig.fa_viral_12	22	42	49	41	6	66	61	85	41	5	7	17	5	1	2	9	3	1	139	340	134	40	90	45
SC-T1-6_contig.fa_viral_13	1	9	3	21	4	28	23	18	45	36	17	14	0	0	0	50	15	16	20	70	78	21	17	4
SC-T1-6_contig.fa_viral_14	40	57	40	21	3	69	28	56	8	5	4	12	6	7	7	10	10	9	77	191	41	20	43	34
SC-T1-6_contig.fa_viral_15	3	26	8	75	2	26	215	150	70	5	3	7	0	0	0	8	0	6	58	142	273	146	160	46
SC-T1-6_contig.fa_viral_16	11	18	12	18	10	38	32	37	63	13	19	19	2	3	1	30	8	11	4	127	60	54	25	24
SC-T1-6_contig.fa_viral_17	0	1	0	1	0	1	0	3	0	0	0	0	0	2	0	0	0	0	9	76	3	0	2	2
SC-T1-6_contig.fa_viral_19	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	91	4	0	0	0
SC-T1-6_contig.fa_viral_20	2	1	3	0	1	1	16	16	19	0	8	6	0	0	1	0	0	2	5	89	45	14	11	6
SC-T1-6_contig.fa_viral_21	17	75	113	37	10	27	42	55	0	0	0	0	1	0	0	0	0	0	22	56	7	65	86	62
SC-T1-6_contig.fa_viral_22	7	19	27	10	3	22	38	98	13	5	3	16	2	1	1	14	2	8	70	148	98	28	23	9
SC-T1-6_contig.fa_viral_23	0	1	0	0	0	2	16	5	7	0	0	0	0	0	0	0	0	0	6	122	80	1	0	0
SC-T1-6_contig.fa_viral_24	0	1	31	3	0	2	1	3	2	0	5	0	0	0	0	0	0	0	34	185	4	1	1	1
SC-T1-6_contig.fa_viral_25	5	10	6	10	11	41	12	17	14	6	2	1	2	6	5	4	3	2	13	263	13	8	21	14
SC-T1-6_contig.fa_viral_26	5	22	15	11	12	19	16	7	1	0	0	0	65	40	46	3	0	0	105	395	26	15	14	9
SC-T1-6_contig.fa_viral_27	0	0	6	2	5	11	24	17	2	2	2	1	9	8	10	0	2	1	95	164	65	7	3	6
SC-T1-6_contig.fa_viral_28	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	321	0	0	0	0
SC-T1-6_contig.fa_viral_29	4	5	2	4	0	2	3	7	4	2	0	0	0	0	0	11	4	4	76	78	124	5	3	1
SC-T1-6_contig.fa_viral_30	2	30	35	9	13	76	16	14	9	2	0	0	2	1	2	4	0	1	14	177	10	7	18	21
SC-T1-6_contig.fa_viral_31	55	117	79	100	85	456	112	163	160	50	80	54	46	26	37	96	59	74	147	7610	132	85	260	162
SC-T1-6_contig.fa_viral_32	25	111	226	70	20	70	116	202	31	14	9	15	22	7	4	34	10	25	292	437	160	54	120	65
SC-T1-6_contig.fa_viral_34	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	656	0	0	0	0
SC-T1-6_contig.fa_viral_35	0	0	0	3	1	5	3	7	12	4	3	5	0	0	0	11	2	8	7	87	101	1	1	1
RP-T1-6_contig.fa_provirus_23	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	16	49	15	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_1	3	3	1	0	0	1	1	1	1	0	1	3	0	1	0	99	208	86	0	1	0	0	3	0
RP-T1-6_contig.fa_viral_2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	99	21	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_3	2	0	0	0	0	0	0	0	0	6	28	34	0	0	0	44	200	130	1	0	0	0	3	1
RP-T1-6_contig.fa_viral_5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	223	13	5	0	0	0	0	0
RP-T1-6_contig.fa_viral_6	22	17	14	24	6	25	18	12	17	17	38	69	12	8	16	45	158	70	28	13	10	13	56	23
RP-T1-6_contig.fa_viral_7	0	1	0	0	0	0	0	0	0	18	1	0	0	0	0	66	57	14	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_9	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	21	71	38	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_10	6	4	5	1	3	3	1	3	1	5	2	11	4	0	1	29	123	44	9	2	4	3	7	2
RP-T1-6_contig.fa_viral_11	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	16	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	232	79	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_13	32	21	14	18	14	17	9	8	7	35	53	90	17	20	12	62	153	49	22	7	8	7	48	7
RP-T1-6_contig.fa_viral_14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	178	19	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_15	16	4	0	2	0	4	5	0	5	53	16	43	0	0	0	39	180	91	21	0	5	1	2	3
RP-T1-6_contig.fa_viral_16	0	0	0	3	0	1	0	0	1	0	1	0	0	0	0	12	188	165	0	1	0	0	0	0
RP-T1-6_contig.fa_viral_17	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	223	44	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	91	9	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_19	14	14	6	5	1	8	12	8	13	9	22	18	0	0	0	129	93	34	22	13	10	12	10	5
RP-T1-6_contig.fa_viral_20	62	98	63	88	32	41	45	34	29	45	87	171	42	68	29	88	233	90	78	30	32	40	107	54
RP-T1-6_contig.fa_viral_21	20	13	10	18	5	19	15	6	12	19	79	124	6	8	11	69	220	77	29	12	7	9	53	28
RP-T1-6_contig.fa_viral_22	68	51	11	29	19	26	22	16	4	17	48	69	6	20	6	51	221	116	18	6	8	12	76	43
RP-T1-6_contig.fa_viral_23	3	0	0	0	1	0	0	0	0	0	1	0	0	0	0	368	147	48	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_24	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	294	58	46	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_25	1	0	0	0	0	0	1	0	0	10	12	78	0	0	0	17	130	23	4	0	0	0	1	0
RP-T1-6_contig.fa_viral_26	37	35	37	44	10	23	62	51	32	34	8	30	1	0	0	112	161	82	42	27	16	24	82	23
RP-T1-6_contig.fa_viral_27	12	4	5	11	3	4	11	4	1	8	5	22	1	2	0	46	137	101	15	2	2	2	20	7
RP-T1-6_contig.fa_viral_28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	78	17	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	198	25	5	0	0	0	0	0
RP-T1-6_contig.fa_viral_31	0	1	0	0	0	1	0	0	0	3	3	1	0	0	0	16	82	38	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_32	0	0	0	0	0	0	0	0	0	38	68	25	0	0	0	95	128	53	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	349	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_34	54	53	29	36	16	28	27	26	12	36	20	48	41	35	28	83	203	150	38	19	19	37	95	68
RP-T1-6_contig.fa_viral_35	11	17	12	11	3	9	16	13	4	7	8	18	2	2	0	45	92	42	6	9	5	8	31	6
RP-T1-6_contig.fa_viral_36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	202	10	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	115	8	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_38	1	1	0	0	0	0	0	0	1	2	3	22	3	0	0	18	135	32	0	0	0	0	3	1
RP-T1-6_contig.fa_viral_39	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	106	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_40	0	0	1	1	0	1	0	0	0	0	1	2	0	0	0	8	208	127	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_41	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	74	120	35	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_42	63	36	21	28	10	25	19	12	8	23	45	104	5	12	5	66	174	75	25	12	11	18	55	26
RP-T1-6_contig.fa_viral_43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	96	3	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_44	13	1	2	11	4	11	6	2	5	35	13	19	0	1	0	44	122	54	15	3	1	2	13	6
RP-T1-6_contig.fa_viral_45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	246	64	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_46	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	61	105	57	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_47	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	11	79	11	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_48	16	3	1	3	1	6	7	3	12	23	12	23	0	1	1	29	116	43	13	3	2	0	14	4
RP-T1-6_contig.fa_viral_49	8	6	8	7	7	13	1	11	9	2	3	2	1	2	1	67	133	88	3	1	3	4	13	8
RP-T1-6_contig.fa_viral_50	105	85	54	52	40	61	50	50	45	85	104	154	104	78	122	170	241	128	83	63	38	36	138	60
RP-T1-6_contig.fa_viral_51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	118	205	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_52	14	6	7	7	4	9	8	12	7	18	6	15	4	3	3	14	246	38	22	7	2	5	24	12
RP-T1-6_contig.fa_viral_53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	79	30	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_54	49	54	30	61	27	37	56	40	32	73	83	157	32	23	14	159	352	162	76	48	22	42	105	47
RP-T1-6_contig.fa_viral_55	0	1	2	0	4	2	0	0	2	0	1	0	5	3	3	2	154	7	14	0	2	0	1	1
RP-T1-6_contig.fa_viral_56	12	4	6	2	1	4	0	2	2	1	3	19	0	3	1	33	207	124	8	0	1	1	6	3
RP-T1-6_contig.fa_viral_57	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	20	72	4	0	0	0	0	0	0
UAB-T1-6_contig.fa_viral_36	44	112	3	52	1	6	65	58	2	2	1	0	1	0	4	3	3	2	6	1	2	31	135	110
UAB-T1-6_contig.fa_viral_37	9	12	2	14	3	17	12	8	3	6	3	8	8	4	2	4	13	12	12	4	2	7	200	80
UAB-T1-6_contig.fa_viral_38	1	8	1	6	2	1	0	4	1	0	0	0	0	3	0	0	0	0	0	2	0	9	438	18
UAB-T1-6_contig.fa_viral_39	0	0	0	0	0	0	4	3	0	0	1	0	0	0	0	0	0	0	95	2	0	0	181	0
UAB-T1-6_contig.fa_viral_40	49	41	32	44	13	30	23	24	4	15	28	62	27	18	13	46	91	49	29	17	16	27	148	56
UAB-T1-6_contig.fa_viral_41	46	87	14	91	5	50	48	27	6	31	23	23	2	4	1	27	35	21	20	15	5	45	335	229
UAB-T1-6_contig.fa_viral_42	25	18	14	22	1	11	34	38	14	12	12	11	0	2	0	60	134	59	16	18	9	16	151	39
UAB-T1-6_contig.fa_viral_43	17	24	18	30	8	16	13	26	7	7	4	7	3	4	3	3	18	11	8	9	5	6	189	72
UAB-T1-6_contig.fa_viral_44	28	42	5	47	7	10	31	22	4	6	7	4	2	8	3	16	11	8	6	4	3	57	192	94
UAB-T1-6_contig.fa_viral_45	1	5	2	4	1	7	2	0	0	5	5	14	1	0	0	6	13	9	8	5	1	3	187	141
UAB-T1-6_contig.fa_viral_46	4	8	1	1	1	2	2	4	0	2	1	4	5	6	8	7	7	2	9	0	0	1	414	7
UAB-T1-6_contig.fa_viral_47	24	36	0	13	0	3	13	11	0	1	0	0	0	0	0	0	0	0	9	1	2	27	141	114
UAB-T1-6_contig.fa_viral_48	55	45	9	48	11	31	34	20	18	24	27	33	6	10	0	26	50	33	22	8	8	19	248	145
UAB-T1-6_contig.fa_viral_49	26	9	3	15	0	0	11	6	0	1	3	2	0	0	0	5	7	6	2	2	0	1	89	30
UAB-T1-6_contig.fa_viral_50	3	8	1	8	2	0	0	2	2	0	2	3	0	1	0	0	1	0	2	0	0	2	202	94
UAB-T1-6_contig.fa_viral_51	7	5	5	7	8	11	2	1	2	5	5	4	10	6	8	5	8	1	7	2	2	5	184	3
UAB-T1-6_contig.fa_viral_52	29	53	49	44	7	67	45	49	6	1	3	1	4	11	0	8	3	8	41	49	14	24	201	126
UAB-T1-6_contig.fa_viral_53	6	1	0	3	0	0	4	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	73	20
UAB-T1-6_contig.fa_viral_54	13	13	16	32	5	10	26	19	1	0	0	0	6	2	0	0	0	0	5	10	5	12	153	75
UAB-T1-6_contig.fa_viral_55	41	34	8	22	6	7	18	11	7	17	22	34	4	2	1	33	79	49	13	8	6	27	137	129
UAB-T1-6_contig.fa_viral_56	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	195	0
UAB-T1-6_contig.fa_viral_57	35	53	49	36	11	15	50	61	3	10	8	5	1	3	3	7	28	19	55	69	18	112	141	105
UAB-T1-6_contig.fa_viral_58	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1051	9
UAB-T1-6_contig.fa_viral_60	70	177	51	39	3	1	15	22	0	0	0	0	1	3	0	0	0	0	7	2	1	116	122	129
UAB-T1-6_contig.fa_viral_61	5	21	2	58	9	20	163	108	43	13	5	8	0	0	0	25	1	8	34	107	240	133	114	36
UAB-T1-6_contig.fa_viral_62	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	449	2
UAB-T1-6_contig.fa_viral_63	16	30	51	28	12	17	38	50	2	3	3	8	10	9	3	13	23	4	55	65	10	56	97	47
UAB-T1-6_contig.fa_viral_64	13	4	1	11	2	7	4	0	0	0	0	1	0	0	0	0	0	1	3	4	0	3	101	43
UAB-T1-6_contig.fa_viral_65	29	133	116	53	6	134	168	184	3	6	0	3	6	4	3	2	7	5	102	297	52	65	124	65
UAB-T1-6_contig.fa_viral_66	159	119	83	119	63	100	88	65	66	87	117	178	95	54	50	165	310	174	132	69	55	64	391	159
UAB-T1-6_contig.fa_viral_67	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	98	0
UAB-T1-6_contig.fa_viral_68	0	0	0	2	0	0	4	2	9	0	37	0	0	0	0	0	0	0	55	8	21	0	262	0
UAB-T1-6_contig.fa_viral_69	6	12	4	20	7	55	28	31	17	2	11	2	0	1	0	4	4	3	22	26	21	22	96	40
UAB-T1-6_contig.fa_viral_70	66	38	36	64	16	155	26	32	13	19	10	10	4	2	6	27	29	5	70	42	22	30	140	56
UAB-T1-6_contig.fa_viral_71	146	104	79	62	54	101	62	62	73	80	84	62	168	107	138	81	102	69	80	69	62	52	251	108
UAB-T1-6_contig.fa_viral_72	130	116	30	90	35	73	54	44	19	45	72	143	26	43	31	104	215	117	61	30	34	68	350	193
UAB-T1-6_contig.fa_viral_73	13	44	35	17	1	9	36	46	0	0	0	0	0	1	0	0	0	0	17	27	0	80	123	106
UAB-T1-6_contig.fa_viral_74	190	84	11	86	28	72	66	69	65	72	72	53	26	37	32	93	96	80	99	37	40	41	239	130
UAB-T1-6_contig.fa_viral_75	75	47	23	35	16	34	37	43	33	29	38	34	51	30	21	45	70	35	48	27	16	25	261	46
UAB-T1-6_contig.fa_viral_76	1	10	4	5	1	0	6	17	1	0	0	0	27	9	3	0	0	0	2	0	4	1	152	11
UAB-T1-6_contig.fa_viral_77	101	218	250	161	45	210	239	260	67	19	24	18	45	28	7	31	16	29	285	365	194	112	337	168
UAB-T1-6_contig.fa_viral_78	27	29	3	17	1	6	24	12	1	0	0	0	0	0	0	1	0	0	8	3	2	7	99	52
UAB-T1-6_contig.fa_viral_79	19	5	0	5	0	4	4	8	0	0	0	0	0	0	0	0	0	0	3	2	0	2	74	20
UAB-T1-6_contig.fa_viral_80	35	26	2	28	6	36	19	13	9	6	4	14	1	1	1	6	9	4	7	16	5	14	247	132
RP-T1-3_contig.fa_viral_809	0	1	1	0	0	1	1	4	2	9	26	29	0	0	0	120	30	10	3	1	1	2	2	1
RP-T1-3_contig.fa_viral_810	1	6	18	7	3	10	9	14	9	9	0	2	2	1	0	121	0	27	6	21	4	4	8	5
RP-T1-3_contig.fa_viral_811	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	204	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_812	1	2	1	0	0	0	0	1	0	0	2	0	0	1	0	161	0	8	0	0	0	0	1	2
RP-T1-3_contig.fa_viral_813	7	19	4	33	5	24	106	64	71	74	26	19	0	0	0	387	8	139	14	54	120	70	76	26
RP-T1-3_contig.fa_viral_814	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	81	0	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_815	1	1	5	0	3	2	7	5	0	2	6	6	0	2	0	190	5	5	2	4	6	1	3	4
RP-T1-3_contig.fa_viral_816	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	74	5	13	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_817	12	39	21	19	21	21	22	27	22	34	40	25	9	4	6	103	7	24	37	56	61	32	28	15
RP-T1-3_contig.fa_viral_818	2	2	1	3	1	2	6	11	6	29	21	36	0	0	0	85	4	17	7	8	8	7	12	7
RP-T1-3_contig.fa_viral_819	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	79	13	11	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_820	3	5	4	3	3	8	4	3	14	36	5	1	4	2	1	464	23	33	7	0	4	6	5	7
RP-T1-3_contig.fa_viral_822	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	422	195	54	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_823	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	68	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_824	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	164	34	38	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_825	0	0	0	0	0	0	0	0	4	66	5	22	0	0	0	165	6	63	0	2	1	0	0	0
RP-T1-3_contig.fa_viral_826	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	136	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_828	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	84	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_829	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	93	8	15	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_830	2	0	0	0	2	3	0	0	0	5	5	0	3	3	3	298	9	1	1	2	2	0	2	0
RP-T1-3_contig.fa_viral_831	1	6	8	3	4	16	5	10	10	3	3	0	3	0	0	314	3	44	9	10	2	4	12	10
RP-T1-3_contig.fa_viral_832	0	0	0	0	0	0	1	0	5	11	19	9	0	0	0	95	0	11	0	3	3	0	0	0
RP-T1-3_contig.fa_viral_833	2	2	2	2	0	2	1	0	14	42	14	3	0	0	0	136	11	94	0	3	2	2	3	0
RP-T1-3_contig.fa_viral_834	0	0	0	0	0	1	1	0	0	8	0	1	0	0	0	122	1	31	2	2	5	2	1	0
RP-T1-3_contig.fa_viral_835	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_836	0	0	0	0	0	0	0	0	0	9	8	8	0	0	0	382	118	33	0	3	4	1	0	0
RP-T1-3_contig.fa_viral_837	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	152	78	19	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_838	10	51	28	30	35	142	71	81	108	17	36	9	4	4	3	4240	59	520	26	34	36	56	108	68
RP-T1-3_contig.fa_viral_839	26	78	62	85	17	78	119	131	198	239	135	158	2	0	2	701	92	159	128	225	315	122	118	76
RP-T1-3_contig.fa_viral_840	0	0	0	0	0	0	0	0	0	3	4	0	0	0	0	117	3	19	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_841	0	0	0	0	0	1	1	2	5	3	1	5	0	0	0	238	1	10	2	12	8	1	1	2
RP-T1-3_contig.fa_viral_842	1	2	2	7	2	7	3	3	32	112	18	8	0	0	0	285	46	266	2	0	2	6	3	0
RP-T1-3_contig.fa_viral_843	0	0	0	0	0	0	1	2	10	25	11	12	0	0	0	165	0	21	1	2	2	1	1	1
RP-T1-3_contig.fa_viral_844	12	7	5	21	5	4	26	30	12	80	89	78	0	0	0	288	5	40	52	55	92	15	15	10
RP-T1-3_contig.fa_viral_845	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	748	330	255	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_846	0	2	0	1	0	1	0	1	0	3	9	18	1	0	1	598	69	78	1	2	1	0	0	0
RP-T1-3_contig.fa_viral_847	41	33	22	42	20	30	37	30	31	35	42	69	22	19	9	146	129	86	46	31	21	28	75	26
RP-T1-3_contig.fa_viral_848	1	1	1	3	0	1	4	3	2	6	9	4	0	0	0	66	6	16	6	9	12	2	4	2
RP-T1-3_contig.fa_viral_849	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	144	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_850	1	5	0	1	0	3	0	0	4	3	5	4	2	0	2	70	23	61	2	1	1	1	2	1
RP-T1-3_contig.fa_viral_851	7	7	5	3	0	0	0	0	1	6	11	2	0	0	0	127	1	4	1	1	0	0	4	3
RP-T1-3_contig.fa_viral_852	1	1	0	1	0	0	1	0	0	24	4	4	0	0	0	82	4	47	1	0	2	5	1	0
RP-T1-3_contig.fa_viral_853	0	0	0	0	0	0	0	0	13	27	4	7	0	0	0	62	23	70	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_854	0	0	0	0	0	0	0	0	0	15	3	3	0	0	0	67	29	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_855	0	0	0	0	0	0	0	0	0	2	3	16	0	0	0	91	5	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_856	0	0	1	0	1	0	0	0	0	70	13	32	0	0	0	200	1	10	0	0	4	0	0	0
RP-T1-3_contig.fa_viral_857	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	250	434	202	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_858	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	263	1	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_859	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	140	0	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_860	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	139	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_111	0	0	1	0	0	1	0	1	1	190	4	1	0	0	0	1	4	5	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_112	28	40	24	21	22	47	38	44	15	109	29	7	12	9	7	21	24	18	29	13	13	31	67	36
HP-T1-3_contig.fa_viral_113	1	1	0	2	0	1	1	2	387	659	103	34	0	0	0	2414	10	461	0	1	0	5	0	2
HP-T1-3_contig.fa_viral_114	2	11	3	19	2	14	16	9	120	148	17	35	0	0	0	174	52	96	10	8	17	13	10	6
HP-T1-3_contig.fa_viral_115	64	22	5	39	4	18	16	9	20	60	14	17	4	2	3	18	66	31	14	6	9	15	51	27
HP-T1-3_contig.fa_viral_116	0	1	0	1	0	0	1	1	2	119	114	78	0	0	0	462	20	32	2	4	5	0	2	0
HP-T1-3_contig.fa_viral_117	0	0	0	0	0	0	0	0	0	275	0	0	0	0	0	0	0	0	1	0	0	0	0	0
HP-T1-3_contig.fa_viral_118	0	0	0	0	0	0	0	0	0	62	0	0	0	0	0	46	0	4	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_119	2	1	2	7	2	2	3	6	81	80	16	11	1	1	2	30	0	13	8	1	7	2	3	1
HP-T1-3_contig.fa_viral_120	1	10	25	6	9	26	7	15	82	176	48	10	0	0	0	610	5	137	8	21	28	5	8	6
HP-T1-3_contig.fa_viral_121	7	3	2	2	0	4	3	6	7	79	35	35	0	0	0	36	3	4	9	8	25	7	3	2
HP-T1-3_contig.fa_viral_122	0	0	3	1	0	2	1	5	1	80	113	152	0	0	0	344	10	25	2	1	2	0	1	0
HP-T1-3_contig.fa_viral_123	0	0	0	0	0	0	0	0	0	230	1	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_124	0	4	0	2	0	0	5	6	74	112	17	3	0	0	0	24	2	12	6	6	12	6	6	1
HP-T1-3_contig.fa_viral_125	0	0	0	17	0	0	4	2	49	75	0	0	1	0	2	10	3	3	0	0	1	2	4	2
HP-T1-3_contig.fa_viral_126	4	3	2	3	0	3	3	3	37	79	6	5	0	0	0	15	0	7	2	2	6	4	3	0
HP-T1-3_contig.fa_viral_128	0	0	0	1	0	1	1	3	0	85	0	0	0	0	6	2	0	0	0	0	0	1	0	0
HP-T1-6_contig.fa_provirus_1	0	0	0	4	1	0	1	3	1	3	202	27	0	1	1	1	0	0	0	1	2	0	1	2
HP-T1-6_contig.fa_provirus_2	0	0	0	0	0	0	0	0	0	69	103	13	0	0	0	61	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_provirus_3	0	0	0	0	0	0	0	0	0	0	296	0	0	0	0	0	0	0	0	0	0	0	0	1
HP-T1-6_contig.fa_provirus_5	0	0	1	0	0	4	5	2	3	1	19	4	0	0	0	9	0	1	9	1	5	1	2	2
HP-T1-6_contig.fa_provirus_6	4	1	1	2	0	1	1	2	1	1	97	4	1	4	3	9	4	1	4	1	2	3	11	2
HP-T1-6_contig.fa_provirus_7	0	0	0	0	0	0	0	0	0	0	180	4	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_1	0	0	0	0	0	0	0	0	0	89	151	7	0	0	0	99	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_2	0	0	1	0	0	0	0	0	0	0	219	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_4	1595	1275	759	984	646	1006	693	844	851	1672	2738	4595	797	577	646	3147	2936	1862	1263	1016	976	749	2164	1106
HP-T1-6_contig.fa_viral_5	0	0	0	0	0	0	0	0	0	0	91	9	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_7	0	0	0	0	0	0	0	0	1	0	4582	11	0	0	0	0	0	0	15	6	2	0	0	2
HP-T1-6_contig.fa_viral_8	0	0	0	0	0	0	0	0	0	0	201	1	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_9	0	0	0	0	0	0	0	0	0	0	86	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_10	2	3	1	3	6	9	4	16	6	5	244	7	0	0	0	13	5	1	7	5	3	4	4	2
HP-T1-6_contig.fa_viral_11	0	0	0	0	0	0	0	0	0	0	91	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_12	0	0	0	0	0	0	0	0	0	0	323	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_14	0	0	0	0	0	0	0	0	0	0	143	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_15	0	0	0	0	0	0	0	0	0	0	159	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_16	56	61	17	36	15	26	31	19	11	53	100	71	8	18	6	27	118	67	22	12	13	36	76	57
HP-T1-6_contig.fa_viral_17	4	9	13	5	5	13	4	10	9	10	162	29	9	2	5	29	42	24	13	18	10	6	11	12
HP-T1-6_contig.fa_viral_18	0	0	0	0	0	0	0	0	0	0	131	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_19	0	0	0	0	0	2	0	0	12	116	174	8	0	0	0	128	0	5	0	1	1	0	0	0
HP-T1-6_contig.fa_viral_20	0	0	0	0	0	0	0	0	0	0	130	116	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_21	0	0	0	0	0	0	0	0	0	0	173	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_22	0	0	1	0	0	0	0	0	0	0	127	77	0	0	0	1	1	0	0	0	0	1	0	0
HP-T1-6_contig.fa_viral_23	0	0	0	0	0	0	0	0	0	0	140	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_24	0	0	0	0	0	0	0	0	0	0	255	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_25	3	13	15	11	3	26	8	11	11	6	85	0	0	0	0	33	1	9	11	24	12	6	25	11
HP-T1-6_contig.fa_viral_26	0	0	0	0	0	0	0	0	0	0	110	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_27	0	0	0	0	0	0	0	0	0	0	112	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_28	0	0	0	0	0	0	0	0	0	0	107	19	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_29	0	0	0	0	0	0	0	1	0	7	89	69	0	0	0	9	1	1	2	1	2	0	0	2
HP-T1-6_contig.fa_viral_30	3	1	2	7	0	1	3	1	0	16	58	3	0	0	0	0	1	1	0	1	1	0	10	8
SC-T1-9_contig.fa_viral_119	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	33	104	0	0	0
SC-T1-9_contig.fa_viral_120	1	3	0	2	2	2	7	26	14	1	0	0	0	0	0	7	0	1	3	165	259	17	14	4
SC-T1-9_contig.fa_viral_121	2	10	14	10	9	54	10	22	32	4	5	0	0	3	0	2	0	2	13	63	116	13	25	23
SC-T1-9_contig.fa_viral_122	0	0	1	0	2	2	3	6	1	0	1	0	0	0	0	0	0	0	2	25	78	3	2	1
SC-T1-9_contig.fa_viral_123	0	0	1	1	2	0	0	2	2	0	0	0	0	0	0	0	0	0	1	16	81	2	2	1
SC-T1-9_contig.fa_viral_124	1	3	1	3	0	6	18	17	8	5	5	18	0	0	0	7	0	0	5	68	166	6	7	1
SC-T1-3_contig.fa_viral_125	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	533	0	0	0	0	0
SC-T1-3_contig.fa_viral_126	0	2	28	2	12	16	4	18	1	0	0	0	25	12	2	0	0	0	229	10	6	16	8	5
SC-T1-3_contig.fa_viral_127	1	2	2	2	1	3	5	10	1	2	0	0	0	1	1	1	0	0	100	74	133	5	7	2
SC-T1-3_contig.fa_viral_128	1	9	16	14	2	3	0	8	0	0	0	0	0	0	0	0	0	0	72	1	0	4	2	6
SC-T1-3_contig.fa_viral_129	5	19	124	15	94	101	30	66	3	3	6	0	30	21	7	3	0	0	558	58	47	64	25	23
SC-T1-3_contig.fa_viral_130	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	271	0	0	0	0	0
SC-T1-3_contig.fa_viral_131	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	1	0	153	0	0	0	0	0
SC-T1-3_contig.fa_viral_132	4	27	131	6	16	22	14	42	16	3	0	0	23	6	2	0	0	0	155	24	21	14	21	11
SC-T1-3_contig.fa_viral_133	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	109	7	0	0	0	0
SC-T1-3_contig.fa_viral_134	52	57	98	48	81	93	54	151	31	35	31	21	14	18	35	68	55	31	757	55	32	106	85	75
SC-T1-3_contig.fa_viral_135	1	3	4	9	2	11	12	10	2	5	0	0	0	0	0	8	5	2	103	90	169	10	11	6
SC-T1-3_contig.fa_viral_136	0	1	1	8	0	1	19	22	3	0	6	1	0	0	0	2	0	0	70	14	10	5	9	9
SC-T1-3_contig.fa_viral_137	42	67	94	60	27	71	123	144	36	20	18	25	15	9	0	22	31	22	175	129	122	63	156	122
SC-T1-3_contig.fa_viral_138	481	390	273	286	192	387	236	239	242	264	360	283	397	312	365	412	534	256	461	233	166	169	711	408
SC-T1-3_contig.fa_viral_139	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	140	0	0	0	0	0
SC-T1-3_contig.fa_viral_140	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	111	0	0	0	0	0
SC-T1-3_contig.fa_viral_141	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	301	0	0	0	0	0
SC-T1-3_contig.fa_viral_142	6	7	4	18	3	6	21	17	28	8	3	7	0	0	0	28	5	13	75	41	42	20	24	12
SC-T1-3_contig.fa_viral_143	1	7	18	9	35	24	0	1	0	0	0	0	0	0	0	0	0	0	214	0	0	1	2	5
SC-T1-3_contig.fa_viral_144	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	130	4	0	2	0	1
SC-T1-3_contig.fa_viral_145	4	2	0	1	1	1	3	2	0	2	1	1	11	2	4	2	1	1	95	4	0	0	7	0
SC-T1-3_contig.fa_viral_147	0	0	2	1	1	3	1	2	2	1	7	1	2	2	4	2	4	4	66	7	2	2	2	3
SC-T1-3_contig.fa_viral_148	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	152	0	22	0	4	0
SC-T1-3_contig.fa_viral_149	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	154	2	0	2	0	0
SC-T1-3_contig.fa_viral_150	17	73	54	27	31	163	42	80	5	0	1	2	8	18	8	1	3	1	68	194	29	24	92	68
SC-T1-3_contig.fa_viral_151	3	2	2	1	1	1	16	11	2	15	1	0	0	0	0	5	4	1	94	37	40	8	12	10
SC-T1-3_contig.fa_viral_152	0	2	0	0	0	4	1	0	1	0	0	0	0	0	0	0	0	0	95	0	0	0	0	1
SC-T1-3_contig.fa_viral_153	17	23	30	25	4	32	97	141	20	5	1	5	0	1	0	8	8	8	205	146	202	33	49	32
SC-T1-3_contig.fa_viral_154	19	17	21	42	6	19	63	37	36	34	17	13	0	0	0	63	7	23	102	53	48	41	38	13
SC-T1-3_contig.fa_viral_155	1	5	0	1	0	3	0	1	1	0	0	0	0	0	0	0	0	0	70	1	0	1	0	3
SC-T1-3_contig.fa_viral_156	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	116	0	1	0	0	1
SC-T1-3_contig.fa_viral_157	0	4	6	3	2	0	16	24	3	1	0	1	3	1	1	0	0	0	36	16	23	11	5	1
SC-T1-3_contig.fa_viral_158	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	236	3	0	1	0	2
SC-T1-3_contig.fa_viral_159	1	0	0	0	0	2	2	5	0	2	0	0	0	0	0	12	0	2	113	117	144	4	6	1
SC-T1-3_contig.fa_viral_160	0	0	0	0	1	0	0	3	0	0	0	0	0	0	1	0	0	0	150	4	0	2	0	0
SC-T1-3_contig.fa_viral_161	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	0	0	0	0	0
SC-T1-3_contig.fa_viral_162	0	2	1	0	1	5	0	2	7	0	0	0	0	0	0	1	0	0	108	0	1	2	3	1
SC-T1-3_contig.fa_viral_163	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	109	2	0	0	0	0
SC-T1-3_contig.fa_viral_164	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	819	0	0	0	0	0
SC-T1-3_contig.fa_viral_165	1	1	1	1	0	1	0	0	0	1	2	0	4	5	5	1	0	0	282	3	1	1	0	1
SC-T1-3_contig.fa_viral_166	0	4	0	8	0	1	10	26	4	0	1	0	0	0	0	2	0	1	90	67	54	7	7	9
SC-T1-3_contig.fa_viral_167	6	12	22	21	12	56	95	95	7	0	1	1	7	4	3	2	3	0	170	289	74	32	38	28
SC-T1-3_contig.fa_viral_168	4	9	12	3	0	3	27	60	0	0	0	0	1	1	0	0	0	0	94	159	120	18	8	4
SC-T1-3_contig.fa_viral_169	8	15	16	9	1	9	14	19	9	0	0	2	2	2	1	0	2	3	52	27	14	14	16	16
SC-T1-3_contig.fa_viral_170	6	8	5	7	3	13	6	6	7	9	5	3	0	3	1	8	24	12	1308	2	4	2	10	9
SC-T1-3_contig.fa_viral_171	3	10	34	3	6	6	15	11	0	0	1	0	0	2	1	0	0	0	252	21	11	16	7	5
SC-T1-3_contig.fa_viral_172	0	1	30	0	8	26	1	6	0	0	0	0	1	0	3	0	1	1	163	19	4	7	12	5
SC-T1-3_contig.fa_viral_173	0	5	1	2	0	3	11	30	5	1	1	0	0	0	0	0	2	2	139	86	63	5	4	7
SC-T1-3_contig.fa_viral_175	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	196	4	0	0	0	4
SC-T1-3_contig.fa_viral_176	0	1	1	4	1	4	5	5	9	5	2	1	0	0	0	8	1	7	77	61	107	6	4	7
SC-T1-3_contig.fa_viral_177	9	9	10	13	2	13	18	19	14	18	57	17	1	5	0	20	23	8	105	24	21	12	33	27
SC-T1-3_contig.fa_viral_178	0	0	0	0	0	0	0	2	0	0	5	1	0	0	0	0	0	0	137	3	4	0	6	0
SC-T1-3_contig.fa_viral_179	32	74	91	48	16	77	112	132	10	4	4	8	5	3	1	10	1	3	152	117	34	47	116	99
SC-T1-3_contig.fa_viral_180	6	54	94	32	27	79	28	72	11	8	4	3	43	70	28	31	3	6	157	566	176	27	52	35
SC-T1-3_contig.fa_viral_181	1	33	87	6	6	21	22	54	0	0	0	0	0	0	0	0	0	0	137	54	24	16	12	18
SC-T1-3_contig.fa_viral_182	3	17	24	1	8	12	12	25	1	2	0	0	2	0	0	0	0	0	180	5	5	11	11	9
SC-T1-3_contig.fa_viral_183	4	28	49	24	13	20	60	74	4	4	2	1	5	1	4	8	12	12	110	75	39	59	90	73
SC-T1-3_contig.fa_viral_184	2	7	2	10	1	2	22	21	9	7	5	1	0	0	0	16	0	3	85	44	51	17	29	6
SC-T1-3_contig.fa_viral_185	2	4	5	5	0	1	7	23	1	0	0	0	0	0	0	0	0	1	59	78	98	18	9	5
SC-T1-3_contig.fa_viral_186	0	0	9	0	5	1	0	11	0	0	1	0	1	0	0	0	0	0	132	9	5	3	5	0
SC-T1-3_contig.fa_viral_187	0	1	1	1	7	3	1	3	0	2	2	0	0	3	6	1	1	0	190	7	1	0	0	0
SC-T1-3_contig.fa_viral_188	0	5	6	1	1	1	3	8	1	0	0	0	1	0	0	0	0	2	104	13	4	2	2	4
SC-T1-3_contig.fa_viral_189	0	5	29	3	4	20	6	45	0	0	0	0	0	0	0	0	1	0	106	14	0	8	14	8
SC-T1-3_contig.fa_viral_190	1	3	0	3	0	2	10	3	0	6	2	0	0	0	0	2	1	0	64	21	20	8	5	2
SC-T1-3_contig.fa_viral_191	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	109	0	0	0	0	0
SC-T1-3_contig.fa_viral_192	5	70	219	20	11	74	19	80	0	0	0	0	0	0	0	0	0	0	112	60	13	54	38	21
SC-T1-3_contig.fa_viral_193	1	8	9	6	2	28	13	16	23	2	30	2	0	0	0	22	0	8	164	36	17	14	15	26
SC-T1-3_contig.fa_viral_194	2	4	1	6	0	0	16	12	6	8	3	1	0	0	0	3	0	1	78	11	29	4	11	2
SC-T1-3_contig.fa_viral_195	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	153	0	0	1	0	0
SC-T1-3_contig.fa_viral_196	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	105	0	0	0	0	0
SC-T1-3_contig.fa_viral_197	13	105	206	66	12	43	50	152	13	4	2	7	24	21	12	15	2	6	130	109	58	50	81	63
SC-T1-3_contig.fa_viral_198	33	74	55	45	29	63	40	46	24	25	38	28	28	20	20	32	9	15	156	32	33	40	55	42
SC-T1-3_contig.fa_viral_199	18	72	46	60	71	304	89	86	169	42	19	23	23	8	5	104	66	24	633	163	55	73	222	127
SC-T1-3_contig.fa_viral_200	6	64	230	7	15	64	40	119	3	1	0	0	0	0	0	1	0	0	292	92	47	60	42	32
SC-T1-3_contig.fa_viral_201	0	0	1	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	80	0	0	1	0	0
SC-T1-3_contig.fa_viral_202	0	0	1	2	0	0	8	4	0	0	0	0	0	0	0	0	0	0	362	6	0	4	2	6
SC-T1-3_contig.fa_viral_203	10	21	16	20	23	16	10	14	2	8	17	8	19	17	7	13	12	5	94	18	4	12	20	19
RP-T1-3_contig.fa_viral_161	0	0	0	0	0	0	0	1	13	4	5	17	0	0	0	117	2	10	0	3	6	0	0	0
RP-T1-3_contig.fa_viral_162	38	15	5	13	5	17	8	16	32	81	52	36	6	2	2	226	88	63	19	27	49	18	9	14
RP-T1-3_contig.fa_viral_163	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	212	128	31	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_164	0	0	0	1	0	0	0	0	1	9	3	3	0	0	0	133	5	34	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_165	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	137	71	43	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_166	0	0	0	0	0	0	1	0	4	20	0	0	0	0	0	77	4	20	6	3	0	2	0	0
RP-T1-3_contig.fa_viral_167	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	132	2	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_168	3	1	0	2	0	4	2	0	3	4	3	4	0	0	1	283	82	33	0	1	7	2	3	2
RP-T1-3_contig.fa_viral_169	1	0	1	2	0	2	1	0	1	33	8	7	0	0	0	84	85	35	3	0	2	0	1	0
RP-T1-3_contig.fa_viral_170	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	105	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_171	0	1	0	0	0	0	0	0	2	5	2	0	0	0	0	140	3	19	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_172	0	0	0	0	0	0	1	0	1	10	2	0	0	1	0	138	1	0	1	0	0	0	2	1
RP-T1-3_contig.fa_viral_173	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	247	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_175	5	3	1	1	1	3	1	3	4	9	13	11	2	1	1	142	47	31	4	1	1	1	12	4
RP-T1-3_contig.fa_viral_176	2	4	0	1	0	4	4	3	3	8	9	14	0	0	0	66	0	8	2	8	9	4	2	3
RP-T1-3_contig.fa_viral_177	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	3	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_178	0	0	1	0	0	0	0	1	1	0	1	1	0	2	3	106	0	0	2	4	2	0	1	0
RP-T1-3_contig.fa_viral_179	0	7	4	5	0	3	24	13	19	94	8	12	0	0	0	441	4	108	9	16	35	19	12	8
RP-T1-3_contig.fa_viral_180	0	0	0	1	0	2	0	0	0	3	6	1	0	0	0	94	51	18	0	0	0	0	0	2
RP-T1-3_contig.fa_viral_181	22	0	0	0	1	0	1	0	3	12	6	8	0	1	0	78	15	3	3	1	0	0	3	4
RP-T1-3_contig.fa_viral_182	0	0	0	1	0	0	0	0	0	83	113	5	0	0	0	83	0	0	0	2	2	0	0	0
RP-T1-3_contig.fa_viral_183	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	107	23	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_184	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	69	0	4	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_7	0	0	0	0	0	0	0	0	0	3	716	2872	0	0	0	1	2	0	0	0	1	1	0	0
HP-T1-9_contig.fa_viral_9	0	0	0	0	0	0	0	0	0	23	0	618	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_10	12	5	1	2	1	9	11	3	0	17	25	66	2	5	8	7	48	26	2	0	1	3	16	10
HP-T1-9_contig.fa_viral_11	0	0	0	0	0	0	0	0	0	0	1	125	0	0	1	1	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_12	2	7	7	8	4	7	6	3	3	2	16	72	11	5	11	4	19	13	4	2	2	6	11	10
HP-T1-9_contig.fa_viral_13	1	0	1	1	0	0	0	1	0	4	10	217	0	0	0	91	0	7	6	0	1	0	2	0
HP-T1-9_contig.fa_viral_14	1	1	0	0	0	1	0	0	0	31	29	209	0	0	0	48	108	47	1	0	0	0	1	0
HP-T1-9_contig.fa_viral_15	2	0	0	0	1	0	0	0	0	9	4	54	0	0	0	10	12	13	0	0	0	0	1	1
HP-T1-9_contig.fa_viral_16	0	0	0	0	0	0	0	0	0	0	7	683	0	0	1	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_17	0	0	0	0	0	0	0	0	0	0	0	267	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_18	0	0	0	0	0	0	0	0	0	4	0	111	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_19	126	65	33	55	32	66	46	33	41	73	263	149	98	59	81	74	109	55	65	41	31	31	142	74
HP-T1-9_contig.fa_viral_20	0	0	0	0	0	0	0	0	0	0	86	340	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_21	0	0	0	0	0	0	0	0	0	6	6	49	0	0	0	12	53	12	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_22	0	0	0	0	0	0	0	0	0	0	0	157	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_23	0	0	0	0	0	0	0	0	0	9	47	114	0	0	0	36	25	6	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_24	0	0	1	0	0	0	0	0	0	0	0	78	0	0	0	1	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_25	2	0	0	0	0	0	0	0	0	1	6	112	0	0	0	3	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_26	25	26	11	16	24	26	12	12	19	34	1040	3059	13	15	13	68	15	21	20	14	12	21	28	18
HP-T1-9_contig.fa_viral_27	1	0	0	0	0	0	0	0	0	14	4	2209	0	0	0	0	24	3	1	0	0	1	0	0
HP-T1-9_contig.fa_viral_28	0	0	0	0	0	0	0	0	0	0	32	181	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_29	0	0	0	0	0	0	0	0	0	0	0	179	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_30	13	11	3	7	4	4	5	2	11	26	42	92	14	4	6	10	6	11	6	4	2	9	15	4
HP-T1-9_contig.fa_viral_31	1	0	0	0	0	0	0	0	0	2	2	65	0	0	0	14	32	19	1	0	0	0	0	0
HP-T1-9_contig.fa_viral_32	0	0	0	1	0	1	0	0	1	0	0	262	0	0	0	0	2	1	0	0	0	1	0	0
HP-T1-9_contig.fa_viral_33	0	0	0	0	0	0	0	0	0	0	0	77	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_34	0	0	0	0	0	0	0	0	0	2	29	103	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_35	0	0	0	0	0	0	0	0	0	0	7	169	0	0	0	4	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_36	0	0	1	1	0	0	0	1	3	6	34	72	0	0	0	4	1	3	3	2	1	0	0	0
HP-T1-9_contig.fa_viral_37	0	0	0	0	0	0	0	0	0	3	130	561	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_38	0	0	0	0	0	0	0	0	0	0	0	105	0	0	0	0	1	0	0	0	0	0	0	1
HP-T1-9_contig.fa_viral_39	31	48	19	33	24	30	21	16	19	66	38	160	27	20	11	41	182	108	26	13	11	25	64	42
HP-T1-9_contig.fa_viral_40	0	0	0	0	0	0	0	0	0	0	0	171	0	0	2	0	2	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_41	0	1	0	1	0	0	1	3	1	6	87	487	0	0	0	5	0	2	3	3	1	3	1	1
HP-T1-9_contig.fa_viral_42	0	0	1	0	0	0	0	0	0	0	0	292	0	0	0	1	0	1	0	1	0	0	0	0
HP-T1-9_contig.fa_viral_43	0	0	0	0	0	1	0	0	0	9	28	95	0	0	0	13	12	10	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_44	0	0	0	0	0	1	0	0	0	58	245	309	1	0	0	1	1	2	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_45	0	0	0	0	0	0	0	0	0	2	0	176	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_46	23	5	1	1	0	6	1	0	2	206	613	830	0	5	2	605	1641	744	0	2	2	1	12	11
HP-T1-9_contig.fa_viral_47	0	0	0	0	0	0	0	0	0	3	40	89	0	0	0	2	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_48	0	0	1	0	0	1	0	0	0	4	0	613	0	0	0	6	2	2	3	0	0	1	0	0
HP-T1-9_contig.fa_viral_49	0	0	0	1	0	0	0	2	1	25	50	106	0	0	0	77	6	5	2	2	3	2	2	0
HP-T1-9_contig.fa_viral_50	0	0	0	0	0	0	0	0	0	0	24	97	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_51	6	12	7	5	3	11	5	10	2	6	14	102	3	3	2	57	64	22	8	6	1	4	29	14
HP-T1-9_contig.fa_viral_52	0	0	0	0	0	0	0	0	0	0	62	257	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_53	0	0	0	0	0	0	0	0	0	0	0	85	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_54	6	5	3	12	2	8	4	6	12	8	167	876	0	1	1	7	6	6	4	7	5	4	15	4
HP-T1-9_contig.fa_viral_55	0	0	0	0	0	0	0	0	1	9	95	155	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_56	22	55	33	30	24	35	29	38	30	78	77	124	8	10	4	228	66	53	31	55	85	34	62	40
HP-T1-9_contig.fa_viral_58	17	11	6	9	0	8	18	17	13	132	261	412	0	1	0	150	318	111	45	14	31	5	60	17
HP-T1-9_contig.fa_viral_59	0	0	0	0	0	0	0	0	0	11	24	80	0	0	0	6	9	6	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_60	2	2	1	3	0	2	5	3	1	15	13	101	1	0	0	84	13	16	4	1	1	3	13	10
HP-T1-9_contig.fa_viral_61	7	5	4	6	1	4	4	3	2	13	20	80	1	0	0	51	150	111	3	6	6	0	16	2
HP-T1-9_contig.fa_viral_62	0	0	0	0	1	0	0	0	0	3	62	170	0	0	0	14	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_63	0	0	0	0	0	0	0	0	0	0	0	129	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_64	0	0	0	0	0	0	0	0	0	0	26	142	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_65	0	0	0	0	0	0	0	0	0	5	56	132	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_66	0	0	0	0	0	1	0	0	0	2	10	74	0	0	0	5	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_67	0	0	0	0	0	0	0	0	0	0	0	127	0	0	0	0	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_461	15	22	54	36	10	44	40	41	38	25	27	36	7	5	1	271	43	50	53	47	48	23	62	44
RP-T1-3_contig.fa_viral_462	371	453	349	395	299	504	247	341	314	581	533	463	382	242	287	1297	369	396	550	357	410	333	641	381
RP-T1-3_contig.fa_viral_463	18	13	8	9	7	17	33	17	22	31	47	47	4	3	2	185	329	111	48	15	9	11	74	31
RP-T1-3_contig.fa_viral_464	0	0	0	0	0	0	0	1	0	2	3	13	0	0	0	61	2	16	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_465	2	4	2	2	2	3	3	3	8	1	6	1	0	1	0	215	1	38	1	3	3	3	9	1
RP-T1-3_contig.fa_viral_466	29	23	14	14	19	21	10	18	31	91	105	35	11	10	23	233	25	59	16	25	14	15	38	29
RP-T1-3_contig.fa_viral_467	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	254	3	16	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_468	0	1	1	0	0	2	0	0	1	30	83	69	0	0	0	165	9	17	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_469	21	22	9	8	12	3	9	6	7	17	30	84	0	2	0	718	28	14	16	4	9	16	21	16
RP-T1-3_contig.fa_viral_470	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	119	2	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_471	37	36	20	31	10	19	34	22	21	37	24	73	12	3	1	145	293	184	30	13	15	20	94	28
RP-T1-3_contig.fa_viral_472	0	0	0	1	0	0	0	2	3	14	8	0	2	0	1	157	20	14	0	0	0	0	0	2
RP-T1-3_contig.fa_viral_473	0	1	0	1	0	0	0	1	0	0	0	6	0	0	0	142	26	33	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_474	29	34	17	47	27	35	28	24	41	48	45	15	12	17	45	264	15	51	19	23	14	18	35	27
RP-T1-3_contig.fa_viral_475	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	649	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_476	4	8	4	0	0	5	7	1	5	2	11	8	0	0	0	304	66	21	3	6	4	6	5	0
RP-T1-3_contig.fa_viral_477	0	0	0	0	0	0	0	0	1	54	4	9	0	0	0	238	26	54	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_478	0	0	0	0	0	1	0	1	1	0	1	2	0	0	0	190	44	46	0	2	3	2	0	2
RP-T1-3_contig.fa_viral_479	12	8	6	20	5	6	24	15	15	39	22	41	1	0	0	170	388	217	18	4	4	7	43	13
RP-T1-3_contig.fa_viral_480	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	462	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_481	0	0	0	0	0	0	0	0	0	4	1	2	0	0	0	429	0	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_482	0	0	0	0	0	0	0	0	0	5	3	6	0	0	0	59	5	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_483	0	0	0	0	0	0	0	0	3	9	2	0	0	0	0	190	0	25	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_484	103	42	20	28	19	36	26	18	12	43	47	89	14	35	4	126	204	88	26	18	14	22	115	55
RP-T1-3_contig.fa_viral_485	1	1	0	1	3	0	2	0	1	12	0	0	0	0	0	189	32	3	4	2	2	2	1	0
RP-T1-3_contig.fa_viral_486	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_487	15	8	10	8	6	13	5	6	8	14	36	18	5	5	5	278	171	49	5	10	8	2	18	6
RP-T1-3_contig.fa_viral_488	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	1	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_489	7	0	0	0	0	0	0	0	12	0	4	2	0	0	0	266	6	1	12	0	0	0	0	0
RP-T1-3_contig.fa_viral_490	4	5	5	7	2	13	2	8	15	20	7	8	0	0	1	175	3	28	11	8	9	3	8	8
RP-T1-3_contig.fa_viral_491	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	69	9	5	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_492	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	90	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_493	9	6	12	6	3	15	4	4	12	6	20	13	5	3	1	82	18	14	0	6	4	3	15	6
RP-T1-3_contig.fa_viral_494	0	2	0	4	0	2	0	0	4	15	6	7	0	0	0	133	6	5	1	4	6	1	5	1
RP-T1-3_contig.fa_viral_495	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	87	40	9	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_496	0	2	1	1	0	0	5	8	5	14	4	5	0	0	0	85	1	25	3	9	9	5	12	3
RP-T1-3_contig.fa_viral_497	1	1	0	4	0	1	0	1	2	7	2	7	0	1	2	93	7	8	6	2	1	3	3	6
RP-T1-3_contig.fa_viral_498	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	55	0	11	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_499	0	0	0	0	0	0	1	1	2	1	3	4	0	0	0	237	25	21	1	0	0	1	0	0
RP-T1-3_contig.fa_viral_500	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	60	0	7	2	0	1	1	0	0
RP-T1-3_contig.fa_viral_501	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	39	2	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_224	0	0	0	0	0	0	0	0	0	0	28	68	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_225	0	0	0	0	0	0	0	0	0	1	6	90	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_226	0	0	0	0	0	0	0	0	0	4	0	157	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_227	2	4	3	4	1	3	6	6	8	136	54	223	0	0	0	432	30	43	8	6	9	3	1	5
HP-T1-9_contig.fa_viral_228	7	13	7	13	11	12	4	5	14	23	28	117	7	2	0	24	4	2	9	5	9	15	9	4
HP-T1-9_contig.fa_viral_229	68	48	39	51	42	55	37	48	50	107	137	194	31	31	62	223	116	110	62	69	65	44	89	56
HP-T1-9_contig.fa_viral_230	0	0	0	0	0	0	0	0	0	0	42	287	0	0	0	0	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_231	1	4	6	6	6	5	5	1	3	41	25	89	5	14	11	22	10	2	5	0	1	6	9	5
HP-T1-9_contig.fa_viral_232	0	0	0	0	0	0	0	0	0	0	0	122	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_233	0	0	0	0	0	0	0	0	0	6	0	484	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_234	0	0	0	0	0	0	0	0	0	0	0	1027	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_235	0	0	0	0	0	0	0	0	0	0	0	180	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_236	0	0	0	0	0	0	0	0	0	0	0	313	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_237	0	0	0	0	0	0	0	0	0	0	0	80	0	0	0	0	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_238	0	0	0	0	0	0	0	0	0	22	3	176	0	0	0	8	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_239	0	0	0	0	0	0	0	0	0	0	0	517	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_240	11	20	14	18	2	18	21	17	19	44	49	208	0	4	1	60	106	59	19	10	7	15	66	18
HP-T1-9_contig.fa_viral_241	0	0	0	0	0	0	0	0	0	0	0	252	0	0	0	1	2	1	2	1	0	0	0	0
HP-T1-9_contig.fa_viral_242	0	0	0	0	0	0	0	0	0	0	0	234	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_243	0	0	0	0	0	0	0	0	0	0	0	129	0	0	0	2	2	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_245	0	0	0	0	0	0	0	0	0	16	0	153	0	0	0	2	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_246	0	0	0	2	0	0	0	0	3	3	21	91	0	0	0	6	2	0	0	0	0	1	1	0
HP-T1-9_contig.fa_viral_247	5	2	0	0	2	1	3	4	6	55	71	115	0	0	1	127	10	5	4	10	7	3	3	2
HP-T1-9_contig.fa_viral_248	0	0	0	0	0	0	0	0	0	2	0	312	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_249	0	0	0	0	0	0	0	0	0	0	0	294	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_250	1	4	2	4	0	0	4	2	2	9	67	170	3	0	0	8	2	3	1	5	10	1	4	1
HP-T1-9_contig.fa_viral_251	0	0	1	0	0	2	0	0	0	0	6	59	0	0	0	13	24	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_252	0	0	0	0	0	0	0	0	0	12	8	1662	0	0	0	0	9	3	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_253	0	0	0	0	0	0	0	0	0	1	0	291	0	0	0	0	1	1	0	0	0	1	0	0
HP-T1-9_contig.fa_viral_254	1	1	0	1	1	0	0	0	1	0	0	327	0	0	1	0	0	0	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_255	2	0	1	0	0	1	1	0	0	21	38	361	1	0	0	10	10	4	3	1	1	2	2	1
HP-T1-9_contig.fa_viral_256	3	2	2	5	3	2	0	1	1	51	44	91	3	7	5	13	4	9	6	0	1	6	11	1
HP-T1-9_contig.fa_viral_257	0	0	0	0	0	0	0	0	0	0	0	105	0	0	0	0	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_258	0	1	0	0	0	1	6	6	2	4	14	68	1	1	0	8	1	1	2	0	0	0	0	1
HP-T1-9_contig.fa_viral_259	4	0	0	0	0	0	0	0	0	9	12	243	0	1	0	29	0	9	1	0	0	0	2	0
HP-T1-9_contig.fa_viral_261	28	32	14	17	6	18	12	13	15	41	51	103	2	4	7	177	47	17	25	13	11	16	31	6
HP-T1-9_contig.fa_viral_262	16	6	2	1	1	4	10	6	2	3	43	209	1	21	4	60	137	44	21	5	1	5	33	6
HP-T1-9_contig.fa_viral_263	0	0	0	0	0	0	0	0	0	2	4	487	0	0	0	1	6	2	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_264	204	181	70	164	30	122	124	98	117	125	204	370	75	47	33	286	656	320	185	99	78	79	406	233
HP-T1-9_contig.fa_viral_265	0	0	0	0	0	0	0	0	0	0	0	142	0	1	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_266	9	3	13	4	2	10	8	10	8	26	30	99	4	1	6	58	27	21	9	17	24	7	7	8
HP-T1-9_contig.fa_viral_267	0	0	0	0	0	0	0	0	0	0	38	144	0	0	0	19	2	0	0	0	0	0	0	0
UAB-T1-3_contig.fa_provirus_3	39	81	25	23	1	0	6	12	0	0	0	0	0	0	0	0	0	0	6	5	0	80	78	80
UAB-T1-3_contig.fa_viral_2	6	33	23	109	14	40	255	178	134	27	16	10	0	0	0	24	2	13	98	114	217	194	221	55
UAB-T1-3_contig.fa_viral_3	16	201	558	121	110	383	99	224	42	5	2	1	9	24	8	0	2	0	64	106	27	118	130	136
UAB-T1-3_contig.fa_viral_4	29	77	118	23	5	14	23	109	1	1	0	2	0	0	0	0	0	0	12	0	1	101	94	47
UAB-T1-3_contig.fa_viral_5	27	39	20	2	2	7	64	193	1	1	0	0	0	0	0	0	0	0	6	121	200	134	91	86
UAB-T1-3_contig.fa_viral_6	151	166	45	146	31	92	137	91	40	67	106	135	50	43	26	98	203	137	93	39	36	129	528	334
UAB-T1-3_contig.fa_viral_7	17	86	61	22	21	37	71	108	10	3	26	43	12	14	21	17	0	5	11	39	31	89	67	27
UAB-T1-3_contig.fa_viral_8	9	25	4	1	0	9	28	96	2	0	2	0	0	0	0	1	0	0	2	64	82	75	32	32
UAB-T1-3_contig.fa_viral_9	23	63	66	22	24	21	60	110	11	12	18	31	4	8	13	23	12	5	42	51	38	79	65	49
UAB-T1-3_contig.fa_viral_10	29	110	162	58	23	68	85	110	0	0	0	0	0	0	0	0	0	0	48	53	17	119	161	143
UAB-T1-3_contig.fa_viral_12	99	292	369	130	47	257	412	469	11	2	1	2	2	2	1	13	3	8	209	293	78	234	459	329
UAB-T1-3_contig.fa_viral_13	11	18	4	30	1	20	23	26	15	2	0	0	0	0	0	1	0	0	26	13	10	57	31	25
UAB-T1-3_contig.fa_viral_14	35	98	168	53	39	71	63	96	2	1	1	0	2	1	0	2	4	1	49	81	8	78	204	114
UAB-T1-3_contig.fa_viral_15	11	68	113	28	7	16	40	66	0	0	0	0	0	0	0	1	0	0	23	30	2	43	101	45
UAB-T1-3_contig.fa_viral_16	12	34	45	17	4	28	40	55	0	0	0	0	0	1	0	0	0	0	23	25	5	49	57	49
UAB-T1-3_contig.fa_viral_18	8	9	0	9	0	2	44	31	0	0	2	2	0	0	0	1	0	0	24	11	14	54	59	27
UAB-T1-3_contig.fa_viral_19	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	106	0	0
UAB-T1-3_contig.fa_viral_20	86	220	314	98	39	130	237	311	29	6	11	5	1	0	1	10	11	9	170	216	116	112	313	178
UAB-T1-3_contig.fa_viral_21	14	35	12	16	9	10	47	55	1	10	3	15	3	5	1	20	41	33	25	49	8	108	215	83
UAB-T1-3_contig.fa_viral_22	47	87	78	44	12	65	54	85	2	2	0	1	1	0	0	1	0	1	32	43	11	99	199	154
UAB-T1-3_contig.fa_viral_23	8	17	19	71	7	23	183	84	74	18	7	15	0	0	0	46	2	11	61	118	250	132	135	40
UAB-T1-3_contig.fa_viral_24	2	6	16	3	1	10	4	41	0	0	0	0	0	0	0	0	0	0	1	29	22	91	25	27
UAB-T1-3_contig.fa_viral_25	1	9	6	0	0	1	28	50	0	0	0	0	0	0	0	0	0	0	0	8	15	48	22	23
UAB-T1-3_contig.fa_viral_26	2	5	6	25	2	6	84	44	16	7	5	2	1	0	0	20	1	11	18	61	83	80	59	17
UAB-T1-3_contig.fa_viral_28	19	64	140	47	20	28	79	76	1	0	0	0	0	1	0	0	0	0	44	79	9	53	109	112
UAB-T1-3_contig.fa_viral_31	8	8	9	37	4	14	167	98	48	3	2	2	0	0	0	16	0	7	15	69	135	83	91	23
UAB-T1-3_contig.fa_viral_33	1	13	28	13	5	21	14	45	20	7	22	1	14	10	21	0	1	1	15	76	56	119	46	34
UAB-T1-3_contig.fa_viral_34	5	10	3	2	5	4	3	12	1	6	5	5	0	1	2	4	11	6	32	9	17	97	7	3
UAB-T1-3_contig.fa_viral_35	3	34	94	13	2	1	34	103	0	0	0	0	0	0	0	0	0	0	73	75	16	66	44	57
UAB-T1-3_contig.fa_viral_36	68	272	309	141	27	262	313	449	93	8	15	34	2	3	0	5	1	3	123	187	71	129	306	154
UAB-T1-3_contig.fa_viral_37	1	20	3	30	2	11	58	60	14	13	3	2	0	0	0	76	3	18	36	52	91	97	91	18
UAB-T1-3_contig.fa_viral_38	11	12	9	41	5	11	123	73	49	49	11	12	0	0	0	168	5	76	40	52	109	119	108	54
UAB-T1-3_contig.fa_viral_39	165	227	63	101	8	27	90	71	14	5	2	13	0	0	0	14	38	9	16	11	5	299	324	316
UAB-T1-3_contig.fa_viral_40	26	80	85	24	4	56	122	204	22	9	6	7	2	1	5	3	3	3	100	145	117	64	76	54
UAB-T1-3_contig.fa_viral_41	1	8	10	31	3	11	75	84	40	13	9	12	0	0	0	18	2	8	22	72	87	109	72	36
UAB-T1-3_contig.fa_viral_43	3355	3489	2185	2535	1539	2870	1775	2248	2303	3529	4332	3600	1709	1190	1573	7054	5239	3527	3361	2931	2700	2017	4796	2712
UAB-T1-3_contig.fa_viral_45	24	98	87	63	38	62	37	92	27	37	47	19	43	24	48	51	12	14	108	129	138	196	109	73
UAB-T1-3_contig.fa_viral_46	2	6	8	2	1	1	8	24	1	3	2	2	0	0	0	10	0	1	5	5	5	90	43	24
UAB-T1-3_contig.fa_viral_48	98	94	43	46	3	41	117	147	37	32	15	18	1	1	1	17	32	22	154	111	83	81	153	55
UAB-T1-3_contig.fa_viral_49	14	40	38	115	101	26	19	10	14	7	2	0	1	0	1	3	1	4	3	2	0	64	34	2
UAB-T1-3_contig.fa_viral_50	4	10	4	68	4	11	170	128	41	5	3	0	0	0	0	11	1	5	59	83	168	113	95	28
UAB-T1-3_contig.fa_viral_51	15	27	11	89	8	46	295	159	68	32	14	8	0	0	0	171	1	50	90	235	452	199	182	45
UAB-T1-3_contig.fa_viral_53	8	18	16	2	3	10	59	148	4	1	1	7	1	0	0	2	0	1	10	113	173	97	108	65
UAB-T1-6_contig.fa_provirus_1	18	9	9	14	7	8	9	1	6	9	11	20	1	2	0	18	24	27	6	6	4	8	44	26
UAB-T1-6_contig.fa_provirus_2	6	1	1	5	0	2	8	2	1	3	4	7	0	0	0	7	15	3	5	2	1	1	49	7
UAB-T1-6_contig.fa_provirus_3	137	27	4	56	11	37	56	25	27	17	7	11	1	0	1	13	39	21	40	8	11	19	111	92
UAB-T1-6_contig.fa_provirus_4	21	1	2	12	3	2	50	22	0	4	0	1	0	0	0	5	7	2	96	37	21	4	74	13
UAB-T1-6_contig.fa_provirus_5	25	40	2	22	1	6	33	13	0	0	0	0	0	0	0	0	2	0	2	1	0	20	119	76
UAB-T1-6_contig.fa_provirus_6	2	15	1	9	3	4	6	4	0	0	0	1	42	36	4	0	0	0	1	1	3	1	118	18
UAB-T1-6_contig.fa_provirus_7	96	23	4	58	8	30	47	24	14	7	3	6	0	0	0	2	1	1	12	8	8	29	124	74
UAB-T1-6_contig.fa_provirus_8	7	9	9	9	1	2	18	14	11	8	7	9	0	0	0	13	16	12	5	3	8	10	260	21
UAB-T1-6_contig.fa_provirus_9	8	5	2	13	1	8	0	0	1	1	0	10	0	0	0	5	2	0	2	0	2	2	231	116
UAB-T1-6_contig.fa_provirus_10	3	1	0	1	1	0	0	1	0	0	0	0	5	4	2	0	2	0	0	0	0	2	221	1
UAB-T1-6_contig.fa_viral_1	23	88	121	35	9	33	61	70	11	0	2	2	4	3	7	2	3	8	49	54	15	33	95	45
UAB-T1-6_contig.fa_viral_2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	352	0
UAB-T1-6_contig.fa_viral_3	13	6	4	5	8	10	1	5	4	1	2	2	155	77	61	3	18	4	11	2	2	4	750	24
UAB-T1-6_contig.fa_viral_4	16	18	12	7	3	16	10	12	8	3	4	7	19	10	2	2	9	4	0	5	4	9	136	10
UAB-T1-6_contig.fa_viral_5	0	0	0	0	0	0	2	0	0	0	3	5	0	0	0	0	0	0	0	0	0	0	91	3
RP-T1-3_contig.fa_viral_442	0	0	0	0	0	0	0	0	0	92	7	0	0	0	0	118	0	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_443	0	1	4	0	0	0	1	2	2	14	4	26	0	0	1	156	9	4	9	4	4	3	0	0
RP-T1-3_contig.fa_viral_444	0	1	0	1	0	0	0	0	1	16	5	3	0	0	0	55	4	28	0	1	3	2	0	0
RP-T1-3_contig.fa_viral_445	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	164	26	30	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_446	5	4	2	1	2	9	1	5	7	16	9	7	10	9	2	163	12	4	4	5	3	4	8	7
RP-T1-3_contig.fa_viral_447	0	0	0	0	1	0	0	0	1	4	1	2	0	0	0	100	14	20	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_448	13	11	10	6	5	17	10	14	19	22	25	11	0	0	0	110	75	29	12	16	14	5	20	8
RP-T1-3_contig.fa_viral_449	2	0	1	1	0	0	1	1	2	2	0	0	1	0	2	209	9	34	1	0	1	0	1	0
RP-T1-3_contig.fa_viral_450	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	288	0	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_451	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	85	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_452	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	88	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_453	0	3	4	8	3	22	12	14	32	8	19	2	0	0	0	246	2	15	2	13	27	5	12	13
RP-T1-3_contig.fa_viral_454	0	0	0	0	0	0	0	0	0	0	9	1	0	0	0	96	45	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_455	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	237	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_456	0	1	0	1	1	1	0	1	0	7	55	6	1	0	1	207	4	0	4	0	3	1	2	1
RP-T1-3_contig.fa_viral_457	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	228	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_458	5	7	4	2	2	2	0	1	0	11	10	0	0	0	0	153	7	2	2	0	0	0	1	1
RP-T1-3_contig.fa_viral_459	0	0	0	0	0	0	0	0	0	4	0	3	0	0	0	116	112	45	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_460	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	409	0	0	0	0	0	0	0	0
SC-T1-9_contig.fa_viral_125	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	70	132	1	0	0
SC-T1-9_contig.fa_viral_126	0	1	0	1	1	1	5	14	6	0	1	3	0	0	0	0	0	1	5	152	146	10	9	6
SC-T1-9_contig.fa_viral_127	0	1	0	1	0	0	7	0	5	0	2	6	0	0	0	14	0	0	6	113	158	1	0	0
SC-T1-9_contig.fa_viral_128	22	89	151	44	23	40	76	142	25	10	9	7	11	8	7	27	4	18	99	149	82	47	77	46
SC-T1-9_contig.fa_viral_129	0	1	0	1	0	0	56	14	6	1	5	1	0	0	0	15	0	1	9	76	137	10	3	2
SC-T1-9_contig.fa_viral_131	0	0	0	1	5	3	13	2	0	1	0	0	0	2	0	0	0	0	1	16	245	1	0	0
SC-T1-9_contig.fa_viral_132	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	41	66	0	0	0
SC-T1-9_contig.fa_viral_134	0	0	0	0	0	1	2	1	1	2	3	3	0	0	0	8	2	3	2	35	80	0	1	0
SC-T1-9_contig.fa_viral_135	1	0	2	1	1	0	3	4	5	1	6	1	0	0	0	2	1	0	1	51	121	10	0	4
SC-T1-9_contig.fa_viral_136	8	27	44	11	6	26	106	230	4	1	0	0	0	0	0	0	1	0	206	411	227	38	48	34
SC-T1-9_contig.fa_viral_137	1	3	4	0	0	0	3	15	2	1	0	0	0	0	0	1	0	0	2	30	65	13	6	6
SC-T1-9_contig.fa_viral_138	0	2	3	1	0	1	9	3	2	1	2	0	0	0	0	2	0	1	5	26	59	3	2	2
SC-T1-9_contig.fa_viral_139	0	0	0	0	0	0	0	0	1	0	0	6	0	0	0	0	0	0	0	38	87	1	0	0
SC-T1-9_contig.fa_viral_140	0	4	3	4	0	3	6	6	1	1	1	1	0	0	0	1	0	1	5	55	70	7	3	4
SC-T1-9_contig.fa_viral_141	1	1	0	1	1	1	1	0	0	7	0	1	0	0	0	0	0	0	4	51	139	0	0	4
SC-T1-9_contig.fa_viral_142	2	7	10	5	3	13	8	17	9	7	3	1	0	0	0	15	1	7	72	90	93	12	13	2
SC-T1-9_contig.fa_viral_143	0	2	0	0	0	6	7	6	0	0	1	0	0	0	0	2	0	1	76	83	147	2	3	3
SC-T1-9_contig.fa_viral_144	29	23	17	34	13	25	22	24	23	21	32	55	5	8	3	49	90	47	33	22	38	15	67	42
SC-T1-9_contig.fa_viral_145	0	2	2	2	0	1	3	1	5	4	0	7	0	0	0	2	0	2	5	67	104	2	1	0
SC-T1-9_contig.fa_viral_146	11	18	15	30	3	25	32	47	40	47	29	54	0	0	0	216	52	31	143	178	379	34	40	14
SC-T1-9_contig.fa_viral_147	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	169	0	0	0
SC-T1-9_contig.fa_viral_148	4	10	21	30	4	36	75	41	122	69	259	100	11	6	2	42	14	43	22	116	246	16	98	17
SC-T1-9_contig.fa_viral_149	13	9	10	43	6	14	193	137	48	11	2	8	0	0	0	35	5	12	72	107	223	136	133	41
SC-T1-9_contig.fa_viral_150	0	1	4	4	1	2	78	28	33	22	11	9	0	0	0	79	0	26	13	102	194	17	8	2
SC-T1-9_contig.fa_viral_151	9	24	22	22	32	143	31	45	38	26	21	3	1	11	5	35	3	6	34	82	117	43	64	52
SC-T1-9_contig.fa_viral_152	1	9	3	9	4	11	23	15	39	36	51	18	0	0	0	93	0	20	1	215	347	17	6	3
SC-T1-9_contig.fa_viral_153	1	0	0	5	1	4	7	3	12	13	8	7	1	0	0	17	5	5	6	70	193	5	4	5
SC-T1-9_contig.fa_viral_154	1	4	2	6	2	3	22	18	10	5	5	11	0	0	0	7	0	5	17	107	186	3	12	4
SC-T1-9_contig.fa_viral_155	3	3	2	8	1	14	9	6	20	4	9	6	0	0	0	13	1	8	13	44	92	9	8	2
SC-T1-9_contig.fa_viral_156	0	2	0	2	0	1	5	4	4	3	1	9	0	0	0	2	0	3	9	38	62	4	1	0
SC-T1-9_contig.fa_viral_157	0	0	0	0	0	0	2	2	3	4	4	5	0	0	0	6	1	0	2	104	240	1	0	0
SC-T1-9_contig.fa_viral_158	0	0	0	1	0	0	3	2	0	2	2	0	0	0	0	0	0	1	9	42	98	0	2	1
SC-T1-9_contig.fa_viral_159	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	96	0	0	0
SC-T1-9_contig.fa_viral_160	1	1	1	0	0	0	5	17	0	0	0	0	0	0	0	0	0	0	2	45	70	11	11	10
SC-T1-9_contig.fa_viral_161	0	0	0	0	2	0	8	5	9	7	4	6	0	0	0	9	1	7	5	76	118	1	12	1
SC-T1-9_contig.fa_viral_162	2	5	7	25	2	8	84	48	16	8	2	0	0	0	0	16	1	4	24	59	157	61	43	22
SC-T1-9_contig.fa_viral_163	5	6	8	7	2	6	6	25	8	1	1	3	0	0	1	9	2	12	65	499	1213	13	16	19
SC-T1-9_contig.fa_viral_164	0	0	2	2	0	0	7	9	0	1	1	2	0	1	0	1	0	3	14	57	76	2	4	0
SC-T1-9_contig.fa_viral_165	3	7	1	11	3	19	35	39	40	57	79	31	0	0	0	96	0	11	17	191	257	29	15	1
SC-T1-9_contig.fa_viral_166	4	12	6	21	3	22	20	17	35	33	28	36	0	0	0	92	18	31	102	124	192	16	18	7
SC-T1-9_contig.fa_viral_167	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	34	156	0	0	0
SC-T1-9_contig.fa_viral_168	2	6	3	11	2	3	11	14	8	6	2	2	0	0	0	7	3	5	71	125	369	9	8	5
SC-T1-9_contig.fa_viral_169	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	338	0	0	0
SC-T1-9_contig.fa_viral_170	0	23	24	12	6	17	8	22	0	2	0	0	1	1	4	1	0	0	48	86	65	7	12	18
SC-T1-9_contig.fa_viral_171	10	89	193	31	7	42	97	202	57	7	9	1	8	4	5	7	3	8	186	332	113	53	53	38
SC-T1-9_contig.fa_viral_172	4	9	3	1	1	1	4	22	0	0	0	0	0	0	0	0	0	0	0	35	71	18	17	11
SC-T1-9_contig.fa_viral_174	16	25	13	5	0	6	43	146	10	7	2	1	0	0	0	12	2	8	12	83	145	70	71	47
SC-T1-9_contig.fa_viral_175	0	16	7	2	7	6	11	31	33	1	6	0	0	0	0	2	1	1	18	90	102	50	34	19
SC-T1-9_contig.fa_viral_176	0	2	3	1	2	5	0	5	1	1	0	0	0	0	0	0	0	0	3	37	128	2	5	2
SC-T1-9_contig.fa_viral_177	4	22	12	30	8	15	33	43	22	33	8	18	0	0	0	41	7	18	59	81	151	25	23	10
SC-T1-9_contig.fa_viral_178	1	5	1	0	1	0	22	24	15	11	10	6	0	0	0	41	12	15	13	120	246	10	4	0
SC-T1-9_contig.fa_viral_179	4	4	4	2	7	28	7	4	21	3	7	1	0	1	0	6	0	4	6	65	122	5	19	10
SC-T1-9_contig.fa_viral_181	28	24	28	10	6	23	59	37	12	3	7	6	13	6	8	16	14	12	80	83	71	7	40	23
SC-T1-9_contig.fa_viral_182	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	82	0	0	0
SC-T1-9_contig.fa_viral_183	0	3	1	6	0	0	32	23	1	0	0	0	0	0	0	0	0	0	14	58	82	23	30	5
SC-T1-9_contig.fa_viral_184	2	2	5	1	0	4	14	13	12	18	2	6	0	0	1	1	2	4	9	137	120	16	17	10
SC-T1-9_contig.fa_viral_185	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	6879	0	0	0
SC-T1-9_contig.fa_viral_187	1	2	2	0	1	0	0	2	6	4	0	1	0	0	0	3	0	1	24	30	62	3	5	1
SC-T1-9_contig.fa_viral_188	6	10	6	4	6	10	23	15	6	1	4	0	15	9	6	2	4	5	17	46	54	17	5	5
SC-T1-9_contig.fa_viral_189	0	1	1	0	1	0	4	2	0	3	2	3	0	0	3	6	0	2	4	72	161	2	0	0
SC-T1-9_contig.fa_viral_190	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	182	0	0	0
SC-T1-9_contig.fa_viral_191	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	13	80	0	0	0
SC-T1-9_contig.fa_viral_192	0	1	5	0	1	2	2	5	0	0	0	0	3	1	0	0	0	0	133	511	118	1	0	5
SC-T1-9_contig.fa_viral_193	3	7	2	2	7	1	9	11	26	3	15	35	1	1	3	5	2	2	11	132	145	25	24	4
SC-T1-9_contig.fa_viral_194	0	0	1	3	1	0	1	5	1	0	3	1	0	0	0	1	0	0	1	45	87	1	1	0
SC-T1-9_contig.fa_viral_195	9	12	2	36	5	12	127	77	39	8	4	4	0	0	0	36	0	6	39	80	160	83	85	51
SC-T1-9_contig.fa_viral_196	1	0	0	0	0	3	5	7	1	5	6	16	0	0	0	4	5	0	10	65	103	0	2	0
SC-T1-9_contig.fa_viral_197	60	173	174	55	16	74	277	425	26	7	4	7	11	4	6	10	13	10	312	723	526	67	107	56
SC-T1-9_contig.fa_viral_198	1	0	0	2	0	0	16	3	5	1	3	8	0	0	0	6	0	2	11	70	200	0	0	2
SC-T1-9_contig.fa_viral_199	65	181	320	95	29	103	195	180	40	10	7	5	15	10	18	44	7	11	192	256	158	107	226	159
SC-T1-9_contig.fa_viral_200	0	0	0	3	1	2	8	9	8	5	11	9	0	0	0	40	0	7	3	199	355	6	2	2
SC-T1-9_contig.fa_viral_201	4	7	4	24	6	24	17	15	45	42	12	29	0	0	0	80	22	33	59	72	226	35	21	8
SC-T1-9_contig.fa_viral_202	0	1	2	0	0	1	4	10	8	3	2	10	0	0	0	16	0	3	2	37	70	7	2	0
SC-T1-9_contig.fa_viral_203	2	0	2	0	0	4	33	27	2	0	1	3	0	1	0	0	1	0	43	106	110	4	6	2
SC-T1-9_contig.fa_viral_204	3	4	6	10	0	13	1	12	5	9	10	12	0	0	0	15	0	5	9	19	64	13	15	7
SC-T1-9_contig.fa_viral_205	1	2	1	4	6	9	9	17	7	0	5	1	0	0	0	1	0	0	5	22	115	2	8	5
SC-T1-9_contig.fa_viral_206	11	14	16	20	5	14	39	43	35	37	31	24	0	0	3	75	9	28	50	70	125	22	30	16
SC-T1-9_contig.fa_viral_207	3	31	58	29	15	43	10	29	4	0	0	0	107	35	5	0	0	1	168	886	86	16	35	26
SC-T1-9_contig.fa_viral_208	8	10	4	14	1	12	10	10	38	19	5	7	0	0	0	53	7	14	56	67	235	8	7	9
SC-T1-9_contig.fa_viral_210	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	53	99	0	0	0
SC-T1-9_contig.fa_viral_211	4	8	10	1	3	14	58	21	16	0	0	0	0	0	0	0	0	0	8	507	261	10	2	1
RC-T1-3_contig.fa_viral_64	3	20	16	14	11	25	9	6	2	0	2	0	74	24	8	0	0	1	3	2	12	4	56	15
RC-T1-3_contig.fa_viral_65	9	15	16	11	8	10	3	6	5	11	19	10	96	42	29	6	5	2	15	8	4	7	8	7
RC-T1-3_contig.fa_viral_66	0	0	0	0	0	0	0	0	0	0	0	0	125	0	2	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_67	0	0	0	0	0	0	0	0	0	0	0	0	166	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_68	0	0	0	0	0	0	0	0	0	0	0	0	63	16	7	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_69	8	18	83	20	65	60	26	22	20	44	16	12	167	153	109	11	8	9	73	55	95	21	27	26
RC-T1-3_contig.fa_viral_70	0	1	0	0	0	0	0	0	0	0	0	0	106	8	9	0	0	1	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_71	4	6	22	1	7	8	3	5	5	3	4	5	141	27	25	2	7	4	7	13	4	5	14	12
RC-T1-3_contig.fa_viral_72	0	1	2	1	2	0	0	0	1	1	0	0	105	63	2	0	0	0	0	1	0	0	2	0
RC-T1-3_contig.fa_viral_73	0	0	0	0	0	0	0	0	0	0	0	0	97	19	9	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_74	0	0	0	0	0	0	0	0	0	0	0	0	276	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_75	1	0	0	0	0	0	0	1	0	0	0	0	91	53	14	0	0	0	5	0	0	0	0	0
RC-T1-3_contig.fa_viral_76	0	0	0	0	0	0	0	0	0	0	0	0	70	23	5	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_77	0	0	0	0	0	0	0	0	0	0	0	0	41	4	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_78	0	0	0	0	1	0	0	0	0	1	2	0	131	1	4	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_79	3	6	34	12	6	15	3	7	5	1	0	2	196	26	26	6	4	3	3	7	3	6	10	6
RC-T1-3_contig.fa_viral_80	2	2	1	1	1	3	2	2	2	4	3	0	100	71	47	5	5	4	28	1	2	0	3	6
RC-T1-3_contig.fa_viral_81	0	1	3	1	1	1	0	0	0	1	1	1	144	3	2	2	1	0	0	1	1	0	0	1
RC-T1-3_contig.fa_viral_82	0	0	0	0	0	0	0	0	0	0	0	1	93	38	13	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_83	38	58	63	56	79	66	37	26	24	20	15	7	153	170	48	14	7	19	75	20	16	39	61	42
RC-T1-3_contig.fa_viral_84	0	0	0	0	0	0	0	0	0	0	0	0	270	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_85	0	0	0	0	0	0	0	0	0	0	0	0	399	0	0	2	0	2	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_86	0	0	0	0	0	0	0	0	0	0	0	0	288	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_87	2	0	3	0	2	1	0	0	1	0	0	0	73	23	17	0	0	0	0	0	0	0	1	0
RC-T1-3_contig.fa_viral_88	0	0	0	0	0	0	0	0	0	0	0	0	258	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_89	0	0	0	0	1	0	0	0	0	0	0	0	563	0	1	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_90	1	3	12	0	1	2	2	0	1	1	0	0	64	17	8	0	0	0	1	0	2	0	2	4
RC-T1-3_contig.fa_viral_91	2	6	28	3	45	36	4	5	6	1	0	0	91	46	22	0	0	0	32	8	8	1	2	2
RC-T1-3_contig.fa_viral_92	0	7	31	15	4	11	0	0	0	0	0	0	239	93	11	0	0	0	0	1	0	3	4	7
RC-T1-3_contig.fa_viral_93	9	13	6	5	11	6	6	4	5	1	3	8	227	122	57	7	3	0	11	3	0	5	8	2
RC-T1-3_contig.fa_viral_94	0	1	0	0	0	0	0	1	0	0	0	0	265	33	19	0	0	0	0	0	0	1	0	0
RC-T1-3_contig.fa_viral_95	0	0	0	0	0	0	0	0	0	0	0	0	115	0	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_provirus_1	0	0	4	1	0	0	0	0	0	0	0	0	80	64	33	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_provirus_2	0	0	0	0	0	0	1	1	0	0	0	0	58	38	23	0	0	0	10	0	0	0	0	0
RC-T1-6_contig.fa_viral_1	4	4	1	2	0	3	7	5	3	5	5	13	1	103	4	4	18	10	4	4	1	1	15	10
RC-T1-6_contig.fa_viral_2	0	0	0	0	0	0	0	0	0	0	0	0	2	430	2	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_3	1	0	0	0	3	2	2	0	0	0	1	0	0	100	0	0	1	0	1	0	0	0	0	0
RC-T1-6_contig.fa_viral_4	34	6	5	2	7	7	3	2	5	3	13	33	175	102	46	20	45	32	8	0	6	3	19	4
RC-T1-6_contig.fa_viral_5	57	46	19	54	17	32	24	21	12	28	55	84	28	84	11	50	142	69	60	20	15	18	128	64
RC-T1-6_contig.fa_viral_6	0	0	0	0	0	0	0	0	0	0	0	0	2	195	2	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_8	0	0	0	0	0	0	0	0	0	0	0	0	0	152	4	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_9	0	0	0	0	0	0	0	0	0	0	0	0	34	107	32	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_10	0	0	0	0	0	0	0	0	0	0	0	0	22	104	25	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_11	4	17	45	10	131	89	12	15	10	3	4	3	161	135	85	3	0	2	105	28	45	11	20	9
RC-T1-6_contig.fa_viral_12	17	19	11	13	6	16	6	9	14	47	10	26	5	72	7	25	44	29	15	11	9	14	19	14
RC-T1-6_contig.fa_viral_13	0	2	0	0	0	1	0	0	0	0	0	0	178	80	11	0	0	0	7	0	0	0	0	0
RC-T1-6_contig.fa_viral_14	3	12	6	7	5	25	8	5	7	0	1	0	63	297	6	0	0	2	8	10	5	6	6	6
RC-T1-6_contig.fa_viral_15	1	1	3	0	1	1	0	0	2	0	0	0	39	392	234	3	15	0	1	0	0	2	0	0
RC-T1-6_contig.fa_viral_16	152	169	48	44	86	64	42	30	33	23	86	25	396	521	233	124	67	24	60	32	20	42	767	110
RC-T1-6_contig.fa_viral_17	0	0	0	0	0	0	0	0	0	0	0	0	0	221	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_18	0	0	0	0	0	0	0	0	0	0	0	0	0	300	4	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_19	0	0	0	0	0	0	0	0	0	0	0	0	2	226	2	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_20	0	1	0	0	0	0	0	0	0	0	0	0	15	197	99	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_21	0	0	0	0	0	0	0	0	0	0	0	0	0	547	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_22	4	10	31	3	21	23	11	21	18	3	1	0	320	207	105	15	7	6	39	16	22	6	14	10
RC-T1-6_contig.fa_viral_23	0	1	0	0	0	0	0	0	0	0	0	0	30	118	38	0	0	0	7	0	0	0	0	0
RC-T1-6_contig.fa_viral_24	0	0	0	0	0	0	0	0	0	0	0	0	0	91	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_25	0	0	0	0	0	0	0	0	0	0	0	0	38	64	63	0	0	0	1	0	0	0	0	0
RC-T1-6_contig.fa_viral_26	0	5	15	0	4	13	11	6	5	0	0	1	9	167	26	1	1	2	2	3	0	3	9	3
RC-T1-6_contig.fa_viral_27	0	0	0	0	0	0	0	0	0	0	1	0	58	362	60	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_28	0	0	0	0	0	0	0	0	0	0	0	0	0	199	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_29	0	0	0	0	0	0	0	0	0	0	0	0	0	260	0	0	1	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_30	0	0	0	0	0	0	0	0	0	0	0	0	0	119	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_31	2	3	14	4	3	9	6	10	2	0	0	0	18	175	66	0	0	0	4	5	0	5	10	9
RC-T1-6_contig.fa_viral_33	0	0	0	0	0	0	0	0	0	0	0	0	0	142	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_34	0	0	0	0	0	2	0	0	0	0	2	0	208	171	37	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_35	0	1	6	0	1	2	3	1	0	0	0	3	189	180	64	0	0	0	8	1	0	1	2	0
RC-T1-6_contig.fa_viral_36	0	0	0	0	0	0	0	0	0	0	0	0	109	103	50	0	0	0	21	0	0	0	0	0
RC-T1-6_contig.fa_viral_37	0	1	0	2	3	1	1	0	0	0	0	0	50	2368	2	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_38	0	0	3	0	13	7	0	0	0	0	0	0	112	94	55	0	2	0	0	1	3	0	0	0
RC-T1-6_contig.fa_viral_39	2	2	2	0	0	4	0	0	0	1	2	7	10	72	6	2	0	0	0	0	0	0	1	2
RC-T1-6_contig.fa_viral_40	0	0	0	0	0	0	0	0	0	0	0	0	0	256	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_41	5	3	4	2	2	5	2	0	3	0	0	0	164	95	22	0	0	0	3	1	0	5	6	3
RC-T1-6_contig.fa_viral_42	0	0	0	0	0	0	0	0	0	0	0	0	0	127	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_43	0	0	0	0	0	0	0	0	0	0	0	0	0	130	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_44	138	125	62	103	36	86	52	57	54	104	89	198	218	200	85	141	262	146	153	51	48	74	253	87
RC-T1-6_contig.fa_viral_45	0	0	0	0	0	0	0	0	0	0	0	0	6	110	34	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_46	0	0	0	0	0	0	0	0	0	0	0	0	0	140	1	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_47	77	69	49	47	34	64	36	55	40	51	73	79	35	109	61	91	79	65	64	41	42	50	98	47
RC-T1-6_contig.fa_viral_48	0	0	0	0	0	0	0	0	0	0	0	0	24	222	27	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_49	0	0	0	0	0	0	0	0	0	0	0	0	0	142	0	0	0	0	0	0	0	0	0	0
RC-T1-6_contig.fa_viral_50	0	8	5	3	1	2	2	5	2	1	2	3	38	202	40	11	0	0	8	9	7	11	5	1
RC-T1-6_contig.fa_viral_51	2	3	8	2	2	4	2	6	4	2	1	0	8	49	7	0	2	0	6	2	0	1	8	8
RC-T1-6_contig.fa_viral_52	17	92	133	62	47	103	53	87	48	13	4	7	117	66	39	19	7	6	65	144	60	49	87	54
RC-T1-6_contig.fa_viral_53	1	0	0	0	0	0	0	0	0	0	0	0	19	71	11	0	0	0	7	0	0	0	0	0
RC-T1-6_contig.fa_viral_54	1	5	7	2	5	6	2	4	7	0	4	1	10	251	40	1	0	2	3	4	9	7	19	9
RC-T1-9_contig.fa_provirus_1	0	1	3	0	0	3	0	0	0	0	0	0	20	3	171	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_provirus_2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_provirus_3	15	53	47	34	67	61	20	27	14	12	13	6	11	48	168	4	6	9	23	15	11	34	52	21
RC-T1-9_contig.fa_provirus_4	4	1	0	2	2	11	0	0	1	0	0	0	31	51	49	0	1	2	0	0	0	1	2	0
RC-T1-9_contig.fa_viral_1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	318	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_47	0	0	0	0	0	0	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_48	24	78	29	80	21	33	236	143	95	58	18	29	7	9	12	130	13	58	76	88	185	186	172	76
Ex45-T1-3_contig.fa_viral_49	4	14	1	56	0	18	178	88	93	41	12	17	0	0	0	176	3	52	86	110	186	73	63	20
Ex45-T1-3_contig.fa_viral_50	19	6	1	5	2	0	64	14	1	2	1	11	0	0	0	17	53	17	68	30	17	8	73	17
Ex45-T1-3_contig.fa_viral_51	9	24	7	48	8	40	218	91	78	36	10	13	0	0	0	58	5	23	57	133	228	139	152	41
Ex45-T1-3_contig.fa_viral_52	0	1	2	1	18	7	221	1	1	0	0	0	5	3	1	0	0	2	2	11	33	3	2	0
Ex45-T1-3_contig.fa_viral_53	18	40	19	67	9	29	184	107	65	46	8	12	0	0	0	125	5	46	67	79	186	145	158	40
Ex45-T1-3_contig.fa_viral_54	5	24	9	66	12	22	247	132	92	32	23	24	0	0	0	82	4	32	53	150	217	121	145	48
Ex45-T1-3_contig.fa_viral_55	24	139	218	39	16	115	109	157	7	1	0	1	21	6	2	1	2	0	164	310	78	86	115	77
HP-T1-9_contig.fa_viral_151	1	0	0	0	0	0	1	0	1	38	24	87	0	0	0	28	9	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_152	0	0	0	0	0	0	0	0	0	3	21	76	0	0	0	5	7	10	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_153	0	0	1	3	2	1	3	1	7	27	161	141	0	0	0	57	2	28	9	3	8	5	4	8
HP-T1-9_contig.fa_viral_154	0	0	0	0	0	0	0	0	0	1	0	271	0	0	0	1	0	0	1	0	0	0	0	0
HP-T1-9_contig.fa_viral_155	38	21	9	32	11	10	21	9	3	34	116	191	13	12	9	103	279	109	45	13	12	18	66	43
HP-T1-9_contig.fa_viral_156	0	0	0	0	0	0	0	0	0	0	0	61	0	0	0	2	0	2	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_157	51	112	76	127	29	100	237	266	273	361	208	252	2	1	2	904	81	202	179	339	509	245	239	120
HP-T1-9_contig.fa_viral_158	0	0	0	0	0	0	0	0	0	4	29	80	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_160	0	0	3	1	0	2	0	0	0	0	2	84	0	1	1	1	11	3	0	5	2	0	5	6
HP-T1-9_contig.fa_viral_161	0	0	0	0	0	0	0	0	0	24	13	96	0	0	0	90	14	20	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_162	52	29	15	23	12	18	24	18	9	131	291	1189	9	11	3	60	128	109	22	16	9	19	47	45
HP-T1-9_contig.fa_viral_163	0	0	0	0	0	0	0	0	0	0	20	77	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_164	0	0	0	0	0	0	0	0	0	0	0	123	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_165	0	0	0	0	0	0	0	0	0	0	16	68	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_166	0	0	2	0	0	1	1	0	0	1	736	2281	0	0	0	1	0	0	1	3	3	0	0	2
HP-T1-9_contig.fa_viral_167	0	0	2	0	0	0	0	0	3	4	839	2124	0	0	0	4	0	0	3	7	2	1	2	0
8-T1-6_contig.fa_viral_12	1	15	73	25	163	141	8	11	18	3	2	0	0	1	0	1	0	0	1	3	4	7	9	8
8-T1-6_contig.fa_viral_13	18	95	278	143	158	313	65	122	33	1	3	3	17	21	0	17	8	11	95	91	50	56	84	80
8-T1-6_contig.fa_viral_14	2	16	99	20	168	162	0	9	0	0	0	0	0	0	0	0	0	0	1	0	0	1	3	9
8-T1-6_contig.fa_viral_15	0	0	0	0	121	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-6_contig.fa_viral_16	10	12	25	6	102	24	14	24	10	7	6	4	7	13	9	7	5	2	76	16	21	17	17	15
8-T1-6_contig.fa_viral_17	0	6	17	10	70	20	0	0	0	0	0	0	0	1	0	0	0	0	2	5	0	2	1	4
8-T1-6_contig.fa_viral_18	0	18	66	6	145	107	1	20	0	0	0	0	0	0	0	0	0	0	7	2	1	11	4	10
8-T1-6_contig.fa_viral_19	6	1	4	3	81	4	2	3	5	10	14	37	3	1	1	12	3	3	6	3	5	3	8	12
8-T1-6_contig.fa_viral_20	0	9	75	14	124	102	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2
8-T1-6_contig.fa_viral_21	0	0	0	0	418	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
8-T1-9_contig.fa_provirus_1	0	0	0	0	0	64	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	4	0
8-T1-9_contig.fa_viral_1	0	6	20	15	85	68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	7
8-T1-9_contig.fa_viral_2	0	0	2	2	2	70	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_3	100	105	114	78	22	130	166	148	37	8	8	12	13	9	0	25	19	14	138	155	122	67	239	143
8-T1-9_contig.fa_viral_4	1	5	6	28	47	140	20	26	5	0	7	1	0	0	0	0	1	0	6	43	10	6	19	13
8-T1-9_contig.fa_viral_5	0	4	39	4	231	164	4	9	4	0	0	0	40	16	4	0	2	0	16	4	2	7	2	2
8-T1-9_contig.fa_viral_6	0	0	0	0	0	72	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	4	1
8-T1-9_contig.fa_viral_7	0	7	56	7	126	121	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4
8-T1-9_contig.fa_viral_9	0	0	0	0	0	178	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_10	0	0	0	0	0	99	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_11	2	7	3	41	13	73	17	8	54	2	2	1	0	0	0	9	3	4	1	0	3	9	10	7
8-T1-9_contig.fa_viral_12	0	0	0	0	0	432	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_13	0	2	2	10	24	63	5	8	0	0	0	0	0	0	0	0	0	0	2	10	7	5	8	7
8-T1-9_contig.fa_viral_14	1	5	10	14	34	106	12	18	1	0	0	0	0	0	0	0	0	0	2	48	14	16	35	23
8-T1-9_contig.fa_viral_15	4	58	93	32	43	120	23	50	26	11	0	0	15	14	3	9	1	4	27	34	18	32	47	31
8-T1-9_contig.fa_viral_16	1	1	1	2	1	206	4	7	1	1	0	0	0	0	0	0	0	0	3	0	5	2	6	3
8-T1-9_contig.fa_viral_17	2	5	23	15	100	98	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	7	1	6
8-T1-9_contig.fa_viral_18	0	0	0	0	0	66	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_19	0	1	0	6	3	232	5	3	17	3	0	1	2	0	0	0	1	0	1	5	9	8	9	13
8-T1-9_contig.fa_viral_20	0	1	2	20	44	90	0	2	2	1	0	0	0	0	0	0	0	0	0	11	1	8	11	7
8-T1-9_contig.fa_viral_21	0	4	8	16	33	89	10	17	11	1	0	1	0	7	0	0	0	0	7	15	12	2	13	16
8-T1-9_contig.fa_viral_22	3	10	9	9	5	102	10	16	4	8	4	2	3	1	3	6	2	2	27	17	7	3	21	23
8-T1-9_contig.fa_viral_23	0	0	0	0	0	2408	0	0	0	2	1	0	0	0	0	1	1	0	1	0	0	0	1	0
8-T1-9_contig.fa_viral_24	3	1	3	41	19	84	25	5	19	1	0	0	0	0	0	2	0	2	0	2	4	20	9	3
8-T1-9_contig.fa_viral_25	3	9	3	64	17	96	47	10	134	6	2	2	0	0	0	8	1	9	2	2	5	37	30	10
8-T1-9_contig.fa_viral_26	0	1	1	0	1	147	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0
8-T1-9_contig.fa_viral_27	0	0	0	0	0	149	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_28	0	0	0	0	0	184	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_29	0	0	0	0	0	68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_30	0	0	0	0	0	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_31	0	0	4	0	0	86	0	0	5	0	0	0	0	0	0	0	0	0	2	1	0	0	1	0
8-T1-9_contig.fa_viral_32	0	0	0	0	1	117	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
8-T1-9_contig.fa_viral_33	3	5	5	1	2	184	2	12	2	7	6	1	1	2	2	5	0	0	0	2	4	3	5	2
8-T1-9_contig.fa_viral_34	0	0	0	0	0	192	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_35	17	86	146	61	85	256	58	84	50	17	3	2	19	11	8	12	0	3	41	58	17	48	73	55
8-T1-9_contig.fa_viral_36	0	4	8	37	39	126	4	4	3	0	0	0	0	0	0	0	0	0	0	11	1	7	22	6
8-T1-9_contig.fa_viral_37	0	0	0	1	0	538	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0
8-T1-9_contig.fa_viral_38	0	4	9	13	9	144	16	42	8	3	5	0	0	0	0	1	0	2	7	52	15	9	21	9
8-T1-9_contig.fa_viral_39	0	0	0	0	0	71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_40	0	0	0	0	0	61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-9_contig.fa_viral_41	12	17	30	20	12	70	10	5	7	3	15	8	5	3	1	6	1	13	16	8	3	12	5	7
8-T1-9_contig.fa_viral_42	0	0	0	0	0	213	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_1	3	13	9	44	2	10	114	91	39	32	16	10	0	0	0	49	1	16	26	52	101	63	45	25
Ex45-T1-3_contig.fa_viral_3	0	0	0	0	0	0	100	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_4	26	72	72	15	6	19	302	394	20	6	3	4	1	1	3	25	5	14	421	874	537	95	42	35
Ex45-T1-3_contig.fa_viral_5	38	55	49	51	38	61	372	74	34	44	20	19	31	21	47	57	39	33	103	37	30	40	72	53
Ex45-T1-3_contig.fa_viral_8	34	112	144	55	11	130	131	170	59	2	2	3	0	1	0	0	0	0	71	81	43	87	117	63
Ex45-T1-3_contig.fa_viral_9	20	89	140	57	14	53	95	99	0	0	0	0	0	0	0	0	0	0	55	62	11	92	135	97
Ex45-T1-3_contig.fa_viral_11	0	0	0	2	0	0	95	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_13	19	38	46	14	5	40	227	166	30	4	6	3	2	5	2	6	10	5	93	111	98	32	68	25
Ex45-T1-3_contig.fa_viral_14	0	0	0	0	0	0	89	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_15	48	43	58	32	5	45	98	82	32	4	6	7	0	1	0	12	9	9	76	77	68	37	96	43
Ex45-T1-3_contig.fa_viral_17	20	110	178	38	23	59	99	83	2	0	0	0	0	0	0	0	0	0	39	85	6	59	142	117
Ex45-T1-3_contig.fa_viral_19	11	26	19	71	7	20	209	132	52	13	5	6	0	0	0	28	3	10	63	132	262	139	146	44
Ex45-T1-3_contig.fa_viral_20	3	54	126	19	7	26	81	82	2	0	0	0	27	19	10	1	0	3	61	29	9	40	50	53
Ex45-T1-3_contig.fa_viral_21	8	75	90	25	16	40	67	53	3	0	0	0	0	0	0	0	0	0	14	30	6	23	73	83
Ex45-T1-3_contig.fa_viral_22	0	0	13	2	3	15	78	54	3	0	0	0	0	0	0	0	0	1	6	112	66	20	5	4
Ex45-T1-3_contig.fa_viral_23	90	90	72	73	12	22	131	103	38	34	39	66	1	1	1	96	187	101	76	74	35	65	214	66
Ex45-T1-3_contig.fa_viral_24	349	275	200	273	83	194	464	251	170	198	217	399	84	59	27	395	845	483	306	176	120	215	839	331
Ex45-T1-3_contig.fa_viral_25	54	93	86	134	40	132	92	96	32	12	3	6	1	5	0	27	47	30	20	34	34	72	129	67
Ex45-T1-3_contig.fa_viral_26	7	19	9	38	5	12	153	94	36	43	13	15	0	0	1	82	39	27	59	86	142	83	72	27
Ex45-T1-3_contig.fa_viral_27	9	62	77	20	6	32	62	35	1	1	1	0	1	0	0	2	3	1	27	35	4	37	72	56
Ex45-T1-3_contig.fa_viral_28	1	3	6	2	1	1	83	96	17	0	0	0	0	1	0	0	0	0	8	37	57	12	13	2
Ex45-T1-3_contig.fa_viral_30	2	6	2	33	2	20	141	89	51	4	2	2	0	0	0	2	1	2	47	70	132	75	81	31
Ex45-T1-3_contig.fa_viral_31	63	83	49	75	36	120	172	71	102	63	90	58	40	25	43	167	83	52	76	89	71	60	120	91
Ex45-T1-3_contig.fa_viral_32	2	1	9	2	2	2	98	18	5	3	1	0	1	1	1	0	0	0	0	2	1	1	3	1
Ex45-T1-3_contig.fa_viral_33	1	1	2	6	6	8	78	24	23	9	5	11	0	0	0	17	3	12	11	57	117	5	9	1
Ex45-T1-3_contig.fa_viral_34	0	0	1	0	0	0	151	11	9	1	1	0	0	0	0	0	0	0	0	1	1	3	5	5
Ex45-T1-3_contig.fa_viral_35	0	1	2	8	2	1	107	31	5	0	6	2	0	0	0	5	0	1	14	119	232	21	12	0
Ex45-T1-3_contig.fa_viral_36	6	8	9	33	3	14	116	62	37	18	7	8	0	0	0	61	0	21	35	56	101	60	62	14
Ex45-T1-3_contig.fa_viral_37	0	0	2	0	1	1	93	4	0	0	0	0	0	0	0	0	1	0	0	1	3	0	0	0
Ex45-T1-3_contig.fa_viral_38	39	93	13	58	3	8	98	45	0	1	0	0	2	4	0	2	0	1	15	5	2	38	188	119
Ex45-T1-3_contig.fa_viral_39	38	76	54	89	22	58	94	92	72	59	27	53	8	6	13	97	59	37	74	54	65	75	102	59
Ex45-T1-3_contig.fa_viral_40	0	6	9	7	3	0	149	13	4	0	0	0	4	1	11	0	0	0	0	1	0	2	6	5
RP-T1-3_contig.fa_viral_40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	271	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	279	46	19	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_42	1	0	0	0	5	0	0	2	0	1	1	1	0	1	1	74	2	6	0	0	0	0	1	1
RP-T1-3_contig.fa_viral_43	0	0	0	0	0	0	0	0	0	3	17	0	0	0	0	92	11	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_44	61	60	80	40	21	41	77	80	36	28	52	42	29	22	14	260	165	93	68	84	47	31	115	65
RP-T1-3_contig.fa_viral_45	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	331	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_46	0	0	0	0	0	0	0	0	50	177	24	1	0	0	0	820	0	141	0	2	4	1	0	0
RP-T1-3_contig.fa_viral_47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	309	139	29	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_48	0	0	0	0	0	0	0	0	1	4	3	3	0	0	0	247	54	34	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_49	12	13	1	39	2	16	83	79	78	120	36	39	0	0	0	441	11	105	30	68	106	75	76	41
RP-T1-3_contig.fa_viral_50	0	1	0	0	0	2	0	0	0	47	38	252	0	0	1	159	2	3	0	0	2	0	0	0
RP-T1-3_contig.fa_viral_51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	12	13	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	160	23	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_54	1	1	0	1	0	2	0	4	6	47	91	5	0	0	0	81	0	2	1	4	2	2	0	1
RP-T1-3_contig.fa_viral_55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	106	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_57	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	228	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_58	0	0	0	1	1	1	0	1	1	46	22	30	0	0	0	226	4	36	7	1	7	1	0	1
RP-T1-3_contig.fa_viral_59	9	12	10	7	2	8	12	19	4	6	12	25	1	1	0	412	106	96	7	8	5	15	71	54
RP-T1-3_contig.fa_viral_60	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	141	0	22	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_68	64	68	33	76	25	81	55	58	42	89	123	245	20	13	8	134	301	153	94	54	32	31	144	84
HP-T1-9_contig.fa_viral_69	0	5	4	0	0	1	6	3	3	41	38	91	0	0	0	243	33	29	4	7	8	1	2	0
HP-T1-9_contig.fa_viral_71	61	51	13	31	6	26	11	12	10	33	31	104	17	12	10	55	129	72	25	8	10	10	69	38
HP-T1-9_contig.fa_viral_72	5	15	27	15	16	33	11	12	21	12	16	160	5	8	2	43	10	14	7	13	14	8	17	4
HP-T1-9_contig.fa_viral_73	3417	2386	1305	1516	1006	1963	1244	1337	1477	1971	2354	2489	1629	1029	1552	3888	3208	1879	1979	1505	1320	1311	3596	1952
HP-T1-9_contig.fa_viral_74	0	0	0	0	0	0	0	0	0	0	0	284	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_75	0	0	0	0	0	1	0	0	0	0	0	74	1	0	0	1	1	1	0	2	1	0	0	1
HP-T1-9_contig.fa_viral_76	0	0	0	0	0	0	0	0	0	0	0	268	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_77	0	0	2	1	1	1	1	1	1	0	1	98	0	0	0	0	0	0	1	2	4	0	0	0
HP-T1-9_contig.fa_viral_78	0	0	0	0	0	0	0	0	0	1	881	3624	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_79	0	0	0	0	0	0	0	0	0	0	0	93	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_80	0	0	0	4	2	3	2	0	3	8	10	60	0	0	7	20	1	3	1	1	0	1	2	3
HP-T1-9_contig.fa_viral_81	3	0	0	1	0	1	1	0	0	2	35	134	0	0	0	0	2	0	1	0	0	2	3	0
HP-T1-9_contig.fa_viral_82	0	0	0	0	0	0	0	0	0	0	0	202	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_83	25	31	22	26	10	13	9	9	11	67	89	106	23	10	10	23	8	12	18	8	9	17	25	9
HP-T1-9_contig.fa_viral_84	0	0	0	0	0	0	0	0	0	0	31	110	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_85	0	0	0	0	0	0	0	0	0	0	0	1921	0	0	0	0	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_86	0	0	0	0	0	1	2	1	2	8	2553	6795	0	1	0	5	0	0	1	6	4	2	1	1
HP-T1-9_contig.fa_viral_87	1	0	0	0	0	0	0	0	0	0	0	373	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_88	2	0	0	0	0	1	0	0	1	1	6	138	0	0	0	6	11	13	1	0	0	0	0	0
HP-T1-9_contig.fa_viral_89	0	0	0	0	0	0	1	0	0	1	485	1049	0	0	0	0	0	0	0	0	0	0	1	1
HP-T1-9_contig.fa_viral_90	0	0	0	0	0	0	0	0	0	10	7	84	0	0	0	31	12	13	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_91	0	0	0	0	0	0	0	0	0	6	0	202	0	0	0	2	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_92	0	1	2	1	0	1	0	0	5	10	59	93	0	0	0	13	0	6	5	5	6	6	0	0
HP-T1-9_contig.fa_viral_93	38	20	32	37	7	39	51	41	26	48	32	120	0	0	0	126	250	132	61	37	35	21	72	27
HP-T1-9_contig.fa_viral_94	0	0	0	0	0	0	0	0	0	0	0	111	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_95	0	0	0	0	0	0	0	0	0	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_96	0	0	0	0	0	0	0	0	0	0	0	85	0	0	0	0	2	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_97	3	0	0	1	0	0	1	0	0	21	11	100	0	0	0	5	37	12	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_98	0	0	0	0	1	0	0	0	2	37	107	119	0	0	0	5	2	4	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_99	0	6	2	8	1	13	8	11	23	8	30	202	0	0	0	32	7	12	5	5	8	9	9	7
HP-T1-9_contig.fa_viral_100	0	0	0	0	0	0	1	0	0	0	0	987	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_101	0	0	0	0	0	0	0	0	0	0	0	1255	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_103	0	0	0	0	0	0	0	0	0	0	0	492	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_104	1	3	1	1	2	5	1	2	5	5	15	201	0	0	0	1	0	0	2	3	3	0	1	4
HP-T1-9_contig.fa_viral_105	9	1	1	4	0	2	6	1	4	16	37	90	0	0	1	44	117	29	11	2	9	2	19	14
HP-T1-9_contig.fa_viral_106	0	0	2	0	1	2	0	0	0	0	5	92	0	0	0	3	0	0	0	0	0	1	0	0
HP-T1-9_contig.fa_viral_107	0	0	0	0	0	0	0	0	0	0	0	186	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_108	0	0	0	0	0	0	0	0	0	4	3	175	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_109	0	0	0	0	0	0	0	0	0	0	0	163	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_110	0	0	0	0	0	0	0	0	0	0	0	87	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_111	0	0	0	1	0	2	3	0	2	57	84	127	0	0	0	293	7	27	0	4	17	1	0	0
HP-T1-9_contig.fa_viral_112	0	0	0	0	0	0	0	0	0	2	0	1770	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_113	0	1	0	0	0	1	0	0	0	0	13	58	0	0	0	1	0	0	2	1	0	0	0	0
HP-T1-9_contig.fa_viral_114	113	147	96	160	48	192	198	197	284	356	271	369	61	63	40	914	175	276	238	306	469	184	232	152
HP-T1-9_contig.fa_viral_115	0	0	0	0	0	0	0	0	0	0	0	265	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_116	0	0	0	0	0	0	1	0	0	17	0	63	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_117	10	4	5	7	7	13	9	8	26	11	158	148	2	6	10	6	4	9	8	7	4	12	12	8
HP-T1-9_contig.fa_viral_118	3	0	0	0	0	0	0	0	2	104	95	114	0	0	0	24	66	66	0	1	1	0	1	0
HP-T1-9_contig.fa_viral_119	6	0	0	0	0	0	0	0	0	3	5	90	0	0	0	1	0	0	0	1	0	0	0	0
HP-T1-9_contig.fa_viral_120	4	8	7	8	10	6	1	3	15	15	112	173	2	5	4	11	12	8	6	6	3	7	24	10
HP-T1-9_contig.fa_viral_121	0	0	1	2	0	1	0	0	0	6	233	470	0	1	0	9	0	2	1	2	12	2	2	0
HP-T1-9_contig.fa_viral_122	0	0	0	0	0	0	0	0	0	0	46	193	0	0	0	45	4	1	0	2	0	0	0	0
HP-T1-9_contig.fa_viral_123	0	0	0	0	0	0	0	0	0	0	0	250	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_124	1	1	3	2	1	0	0	2	2	3	8	109	0	0	0	0	0	1	0	3	2	2	1	0
HP-T1-9_contig.fa_viral_125	0	0	0	0	0	0	0	0	0	0	0	115	0	0	0	0	0	0	1	0	0	0	1	1
HP-T1-9_contig.fa_viral_126	40	19	9	33	4	26	36	32	40	79	50	204	4	2	3	62	68	35	55	34	42	22	56	43
HP-T1-9_contig.fa_viral_127	4	7	0	1	0	2	8	2	5	14	28	83	0	0	0	64	149	52	10	1	1	0	15	14
HP-T1-9_contig.fa_viral_128	0	7	1	0	2	13	2	1	4	36	76	163	0	1	0	38	2	11	1	1	1	2	1	0
HP-T1-9_contig.fa_viral_129	0	0	1	0	0	0	0	0	0	2	10	86	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_130	0	0	0	0	0	0	0	0	0	23	55	130	0	0	0	34	8	19	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_131	0	0	0	0	0	0	0	0	0	5	26	81	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_132	0	0	0	0	0	0	0	0	0	8	75	180	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_133	2	2	1	0	1	0	0	2	4	43	113	512	0	0	0	2	3	1	1	0	0	0	3	1
HP-T1-9_contig.fa_viral_134	0	0	0	0	0	0	0	0	0	0	0	119	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_135	6	3	7	6	1	10	3	6	3	22	70	95	1	5	1	38	52	50	12	18	10	4	32	12
HP-T1-9_contig.fa_viral_136	289	334	234	262	156	281	176	212	200	303	381	617	179	163	139	478	480	290	371	242	222	230	542	271
HP-T1-9_contig.fa_viral_137	0	0	0	0	0	0	0	0	1	6	24	60	0	0	0	18	0	3	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_138	0	0	0	0	0	0	0	0	0	0	0	158	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_139	14	16	19	21	2	9	17	8	7	52	53	137	3	5	2	48	62	64	32	23	10	8	50	28
HP-T1-9_contig.fa_viral_140	0	5	8	4	2	4	5	1	12	14	80	92	0	0	3	21	3	13	18	27	40	4	12	10
HP-T1-9_contig.fa_viral_141	0	2	0	0	3	3	1	2	0	49	35	246	0	4	2	126	21	30	2	4	0	3	4	9
HP-T1-9_contig.fa_viral_142	0	0	0	0	0	0	0	0	0	0	16	80	0	0	0	11	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_143	0	0	0	0	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0	0	1	0	0	0
HP-T1-9_contig.fa_viral_145	89	115	91	70	15	88	107	107	21	26	59	101	12	17	2	33	26	22	99	144	92	49	324	169
HP-T1-9_contig.fa_viral_146	64	48	22	35	22	31	43	27	39	77	55	85	28	15	17	100	85	56	62	39	41	33	98	42
HP-T1-9_contig.fa_viral_147	0	0	0	0	0	0	1	0	0	18	0	175	0	0	0	2	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_148	0	0	0	0	0	0	0	0	0	0	0	201	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_149	0	0	0	0	0	0	0	0	1	0	25	263	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_150	0	0	0	0	0	0	0	0	0	0	42	163	0	0	0	0	0	0	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_169	0	0	0	0	0	0	1	3	0	12	4	23	0	0	0	33	210	219	0	0	0	1	0	1
RP-T1-9_contig.fa_viral_170	581	403	210	360	159	284	348	224	233	380	455	745	175	152	99	740	1596	858	390	193	203	262	909	409
RP-T1-9_contig.fa_viral_171	4	3	0	1	0	0	0	0	0	4	10	8	0	0	0	25	104	120	1	2	0	3	8	7
RP-T1-9_contig.fa_viral_173	3	6	3	32	1	11	107	60	63	94	37	36	0	0	0	376	12	113	28	73	149	61	59	23
RP-T1-9_contig.fa_viral_174	5	3	7	7	3	7	13	7	8	15	14	9	0	2	1	287	87	110	6	8	11	5	9	10
RP-T1-9_contig.fa_viral_175	4	1	1	6	0	0	1	0	3	8	4	20	0	0	0	37	7	336	91	3	2	2	1	3
RP-T1-9_contig.fa_viral_176	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	81	74	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_177	0	1	0	2	0	0	1	2	13	67	10	13	0	0	0	203	13	72	7	1	4	1	4	0
RP-T1-9_contig.fa_viral_179	4	0	0	0	2	1	1	1	1	2	6	4	0	0	0	39	13	146	7	0	0	0	0	1
RP-T1-9_contig.fa_viral_180	2	4	1	18	1	5	33	27	61	211	44	30	0	0	0	690	15	239	17	28	36	31	32	4
RP-T1-9_contig.fa_viral_181	0	0	0	0	0	0	0	0	10	40	9	18	0	0	0	190	21	103	0	1	3	0	0	0
RP-T1-9_contig.fa_viral_182	0	0	0	0	0	0	0	1	1	2	1	0	0	0	0	371	88	92	2	1	0	0	3	0
RP-T1-9_contig.fa_viral_183	12	14	1	15	0	2	11	9	23	19	6	31	3	6	5	114	215	119	8	6	11	6	35	13
RP-T1-9_contig.fa_viral_184	21	11	0	2	5	6	1	0	3	58	34	69	5	6	4	70	349	327	0	2	0	3	6	6
RP-T1-9_contig.fa_viral_185	14	20	9	17	11	13	12	17	7	17	22	68	5	2	3	61	149	182	16	16	18	13	93	74
RP-T1-9_contig.fa_viral_187	3	4	6	6	3	6	4	8	3	10	6	3	12	14	16	328	92	82	9	14	6	7	8	1
RP-T1-9_contig.fa_viral_188	0	2	2	2	0	3	2	1	12	31	3	0	0	0	0	96	10	90	1	2	1	2	0	0
RP-T1-9_contig.fa_viral_189	0	3	0	0	0	1	0	1	3	6	4	7	2	0	1	59	100	95	2	2	0	4	6	5
RP-T1-9_contig.fa_viral_190	12	42	32	70	13	62	69	72	153	246	67	65	1	1	1	476	73	274	64	100	145	63	71	37
RP-T1-9_contig.fa_viral_191	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	13	25	82	0	1	0	0	0	1
RP-T1-9_contig.fa_viral_192	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	7	3	73	0	0	0	0	2	0
RP-T1-9_contig.fa_viral_193	94	81	65	70	24	83	100	122	46	67	15	32	1	2	2	74	111	118	92	109	87	45	112	85
RP-T1-9_contig.fa_viral_194	6	5	3	23	8	25	18	20	155	132	20	4	0	0	0	263	37	231	26	18	46	24	22	11
RP-T1-9_contig.fa_viral_195	85	70	40	79	27	41	79	37	38	34	48	97	47	17	12	121	344	196	62	36	24	48	189	80
RP-T1-9_contig.fa_viral_196	7	0	0	0	0	0	0	1	0	0	0	0	0	0	0	26	122	93	0	0	0	4	0	0
RP-T1-9_contig.fa_viral_197	6	42	12	80	12	26	271	181	135	240	76	92	0	0	0	959	45	342	91	154	309	207	174	53
RP-T1-9_contig.fa_viral_198	15	5	0	3	5	0	6	0	1	21	37	57	0	0	1	48	80	59	17	2	3	0	31	34
RP-T1-9_contig.fa_viral_199	373	226	170	217	112	207	182	153	134	219	239	435	119	109	44	382	907	537	248	139	113	110	573	260
RP-T1-9_contig.fa_viral_201	1	0	1	0	0	1	0	2	0	3	21	30	2	0	0	22	74	59	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_202	0	0	3	1	0	0	0	0	3	38	8	3	1	2	2	724	73	145	2	0	7	0	1	1
RP-T1-9_contig.fa_viral_203	381	337	147	338	99	211	276	205	190	262	262	462	129	95	34	542	1134	640	339	141	130	200	781	316
RP-T1-9_contig.fa_viral_204	2	0	0	0	2	0	1	1	2	6	4	7	0	1	1	75	126	79	5	1	4	2	5	4
RP-T1-9_contig.fa_viral_205	0	1	1	2	1	0	0	0	68	23	10	1	0	0	0	70	6	65	0	0	3	0	1	0
RP-T1-9_contig.fa_viral_206	1	2	2	1	0	0	0	2	2	3	4	11	2	1	4	24	168	116	1	2	0	0	6	5
RP-T1-9_contig.fa_viral_207	0	0	0	0	0	0	0	0	1	5	0	0	0	0	0	309	87	90	0	1	0	0	0	0
RP-T1-9_contig.fa_viral_208	64	16	0	20	0	15	12	6	16	91	35	59	2	1	2	80	270	172	28	4	18	12	27	13
RP-T1-9_contig.fa_viral_209	0	0	2	9	2	4	34	27	21	59	8	20	0	0	0	257	15	88	4	14	44	23	17	4
RP-T1-9_contig.fa_viral_210	0	0	0	1	1	1	0	1	101	219	41	18	0	0	0	950	5	207	0	4	2	4	1	1
RP-T1-9_contig.fa_viral_211	0	3	3	14	7	28	12	4	59	50	4	2	0	0	0	38	13	85	1	6	7	20	15	5
RP-T1-9_contig.fa_viral_212	202	172	74	197	86	126	198	115	101	185	163	300	84	68	32	513	1129	541	238	134	110	110	495	188
RP-T1-9_contig.fa_viral_213	2	3	1	13	3	10	5	7	40	22	5	8	0	0	0	49	1	54	5	5	4	10	7	3
RP-T1-9_contig.fa_viral_214	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	44	147	75	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_215	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	42	69	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_216	7	6	4	8	0	4	2	6	4	13	4	19	0	0	0	282	90	92	4	4	0	6	20	7
SC-T1-3_contig.fa_provirus_1	0	4	0	1	12	3	0	2	2	6	0	0	1	1	5	4	3	0	99	1	6	9	2	2
SC-T1-3_contig.fa_provirus_2	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	256	0	0	0	0	0
SC-T1-3_contig.fa_provirus_3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	444	0	0	0	0	0
SC-T1-3_contig.fa_provirus_4	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0
SC-T1-3_contig.fa_provirus_5	4	7	10	8	15	15	6	4	5	1	2	6	2	2	0	5	11	2	130	2	5	4	5	5
SC-T1-3_contig.fa_provirus_6	0	2	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	33	2	0	0	4	0
SC-T1-3_contig.fa_provirus_7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	49	0	0	0	0	0
SC-T1-3_contig.fa_provirus_8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	1	19	4	0	0
SC-T1-3_contig.fa_provirus_9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	46	2	14	0	1	0
SC-T1-3_contig.fa_provirus_10	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	1	0	0
SC-T1-3_contig.fa_provirus_11	1	4	1	2	2	3	1	2	0	3	2	8	1	4	1	6	0	1	1017	2	4	1	0	3
SC-T1-3_contig.fa_provirus_12	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	701	0	0	0	0	0
SC-T1-3_contig.fa_provirus_13	1	0	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	95	2	0	2	1	2
SC-T1-3_contig.fa_viral_1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	0
SC-T1-3_contig.fa_viral_2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	225	0	0	0	0	0
SC-T1-3_contig.fa_viral_3	0	2	2	2	2	4	1	3	3	2	3	2	2	0	2	6	0	0	53	6	3	1	3	2
RP-T1-3_contig.fa_viral_861	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	102	11	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_862	1	1	0	1	1	2	1	1	3	1	24	0	0	0	2	79	2	1	4	4	4	3	0	1
RP-T1-3_contig.fa_viral_863	2	10	0	1	1	2	2	6	2	100	33	89	0	0	0	733	34	78	5	8	10	5	6	1
RP-T1-3_contig.fa_viral_864	6	8	2	15	0	5	4	5	12	26	63	56	1	2	0	75	18	24	8	0	1	6	26	10
RP-T1-3_contig.fa_viral_865	0	0	0	0	0	0	0	1	0	14	4	4	0	0	0	88	2	28	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_866	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	147	109	38	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_867	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	155	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_868	0	0	0	0	0	1	0	0	0	25	11	4	0	0	0	80	2	10	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_869	0	0	0	0	0	0	0	0	0	3	8	7	0	0	0	94	19	11	2	0	0	1	0	0
RP-T1-3_contig.fa_viral_870	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	103	4	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_871	0	5	0	1	2	5	2	0	14	33	2	0	0	0	0	82	8	69	0	3	9	2	1	0
RP-T1-3_contig.fa_viral_872	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	96	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_873	11	0	0	0	0	0	2	0	7	24	19	53	0	1	0	195	1414	2	10	0	0	1	0	0
RP-T1-3_contig.fa_viral_874	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	21	35	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_875	0	0	0	0	0	1	0	0	0	16	0	3	0	0	0	111	0	0	0	0	0	1	0	1
RP-T1-3_contig.fa_viral_876	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	5	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_877	2	3	0	1	3	2	1	0	11	7	5	2	1	0	0	79	6	0	2	1	0	1	1	1
RP-T1-3_contig.fa_viral_879	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	115	26	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_880	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	237	0	0	0	0	0	0	0	0
RP-T1-6_contig.fa_provirus_1	1	0	0	0	0	0	0	0	0	1	4	3	0	0	0	23	72	23	0	0	1	0	2	1
RP-T1-6_contig.fa_provirus_2	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	6	18	2	0	0	0	0	0	0
RP-T1-6_contig.fa_provirus_3	1	0	0	0	2	0	0	0	0	4	4	34	0	1	1	8	67	21	4	0	0	0	1	0
RP-T1-6_contig.fa_provirus_4	1	0	0	1	0	0	1	0	0	1	0	1	0	0	0	8	23	12	0	0	1	0	1	0
RP-T1-6_contig.fa_provirus_5	1	0	0	0	0	0	0	0	0	4	16	6	0	0	0	147	68	7	0	0	0	1	1	0
RP-T1-6_contig.fa_provirus_6	32	2	1	3	1	1	2	0	0	0	0	3	0	0	0	16	55	19	6	0	0	0	5	1
RP-T1-6_contig.fa_provirus_7	0	0	0	1	0	1	0	0	1	5	1	2	0	0	0	281	86	60	2	0	2	3	1	0
RP-T1-6_contig.fa_provirus_8	5	8	8	13	2	5	7	7	4	7	1	11	2	0	0	80	155	49	20	8	3	5	30	12
RP-T1-6_contig.fa_provirus_9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	184	65	39	0	0	0	0	0	0
RP-T1-6_contig.fa_provirus_10	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	8	25	9	0	0	1	0	0	0
RP-T1-6_contig.fa_provirus_11	1	0	1	0	0	0	0	1	0	2	0	17	0	0	0	658	295	75	0	0	0	0	0	2
RP-T1-6_contig.fa_provirus_12	0	0	0	0	0	0	0	0	0	0	0	14	0	0	0	41	243	48	1	0	0	0	0	0
RP-T1-6_contig.fa_provirus_13	2	0	1	0	0	1	0	0	0	9	2	3	0	0	0	384	148	46	0	0	1	0	0	0
RP-T1-6_contig.fa_provirus_14	11	0	0	0	0	0	0	0	1	1	39	14	0	0	0	517	342	69	1	1	1	0	0	0
RP-T1-6_contig.fa_provirus_15	0	1	0	0	1	2	1	0	0	4	2	3	0	0	0	57	69	63	0	0	1	0	3	1
RP-T1-6_contig.fa_provirus_16	15	1	1	0	1	2	1	3	4	17	2	12	0	0	2	14	27	18	7	2	4	3	3	3
RP-T1-6_contig.fa_provirus_18	0	2	0	0	0	0	0	0	0	0	1	1	2	2	0	31	61	24	3	1	2	0	0	0
RP-T1-6_contig.fa_provirus_19	0	1	0	0	2	1	0	1	0	10	15	99	0	0	0	26	121	52	2	1	1	0	3	2
RP-T1-6_contig.fa_provirus_20	2	3	1	0	0	1	0	2	1	14	60	18	3	1	0	1080	626	82	5	1	0	0	1	1
RP-T1-6_contig.fa_provirus_21	25	34	19	13	2	14	26	24	24	27	20	49	4	5	0	100	241	145	14	13	10	13	53	24
RP-T1-6_contig.fa_provirus_22	6	13	16	12	6	9	26	22	38	159	96	86	10	3	2	360	241	90	41	33	71	21	32	15
SC-T1-6_contig.fa_viral_156	39	48	34	20	15	30	51	50	28	20	6	11	7	8	6	25	26	20	36	72	39	47	73	52
SC-T1-6_contig.fa_viral_157	0	2	0	1	0	1	2	2	0	0	0	0	0	0	0	2	0	0	17	117	8	0	3	1
SC-T1-6_contig.fa_viral_158	100	95	53	96	13	44	85	74	42	30	47	70	10	6	2	79	112	76	55	61	19	38	245	76
SC-T1-6_contig.fa_viral_159	28	149	295	108	22	75	101	199	36	4	15	10	42	27	6	58	14	27	140	228	81	81	128	68
SC-T1-6_contig.fa_viral_160	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	5	91	0	0	0	0
SC-T1-6_contig.fa_viral_161	6	8	4	2	0	5	10	21	8	3	5	6	3	1	1	13	6	0	6	91	27	12	17	6
SC-T1-6_contig.fa_viral_162	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	75	1	0	1	0
SC-T1-6_contig.fa_viral_163	1	14	30	7	11	17	13	19	1	0	0	0	4	1	1	0	0	0	59	125	16	2	7	12
SC-T1-6_contig.fa_viral_164	1	2	3	0	5	6	6	6	5	0	3	0	0	0	0	15	1	3	1	94	18	3	11	3
SC-T1-6_contig.fa_viral_165	7	7	2	18	14	54	11	17	21	5	8	0	1	1	0	1	0	1	9	101	18	34	46	40
SC-T1-6_contig.fa_viral_166	2	16	15	72	12	20	189	97	42	8	7	8	0	0	0	22	0	0	65	123	184	127	108	58
SC-T1-6_contig.fa_viral_167	1	0	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	170	0	0	1	0
SC-T1-6_contig.fa_viral_168	1	17	15	17	4	21	61	29	9	0	0	0	5	3	1	1	0	2	31	121	42	16	31	34
SC-T1-6_contig.fa_viral_169	20	61	71	22	10	50	48	93	30	0	2	3	6	4	5	8	1	5	63	124	34	37	50	31
SC-T1-6_contig.fa_viral_170	1	15	12	15	4	13	12	9	4	0	0	0	1	0	0	0	1	0	5	79	56	1	10	10
SC-T1-6_contig.fa_viral_172	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	92	0	0	0	0
SC-T1-6_contig.fa_viral_173	0	0	1	1	1	2	1	8	0	0	5	0	1	0	0	2	2	1	3	102	91	5	2	2
SC-T1-6_contig.fa_viral_174	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	97	0	0	0	0
SC-T1-6_contig.fa_viral_175	2	6	4	6	0	2	13	13	7	1	0	0	2	0	0	1	1	0	34	111	35	5	6	3
SC-T1-6_contig.fa_viral_176	2	8	3	45	6	14	117	74	51	21	8	15	0	0	0	85	4	31	26	94	126	84	75	33
SC-T1-6_contig.fa_viral_177	9	30	37	13	6	16	37	45	14	3	2	2	4	1	2	25	5	3	73	150	38	16	40	25
SC-T1-6_contig.fa_viral_178	0	0	0	1	0	0	3	3	2	2	1	0	0	0	0	3	0	0	0	89	104	0	0	0
SC-T1-6_contig.fa_viral_179	5	11	9	24	3	18	26	37	40	28	16	10	0	0	0	102	12	36	131	176	215	39	21	10
SC-T1-6_contig.fa_viral_180	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	9	0	1	64	61	79	0	1	0
SC-T1-6_contig.fa_viral_181	1	2	1	3	1	0	2	2	3	1	1	0	0	0	0	1	0	0	35	66	94	5	5	1
SC-T1-6_contig.fa_viral_182	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	0	0	0	0	107	83	0	0	0
SC-T1-6_contig.fa_viral_183	1	3	7	10	14	43	10	21	12	1	1	1	3	0	0	1	0	0	6	546	13	3	17	7
SC-T1-6_contig.fa_viral_184	0	0	0	1	0	2	1	4	0	0	0	0	1	0	1	0	0	0	20	231	0	2	0	3
SC-T1-6_contig.fa_viral_185	0	0	0	1	0	1	1	1	0	0	0	0	8	10	1	2	0	2	56	245	58	0	0	1
SC-T1-6_contig.fa_viral_186	0	0	1	0	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	176	1	0	1	1
SC-T1-6_contig.fa_viral_187	0	1	5	0	0	2	17	14	7	0	0	0	0	2	0	0	0	0	0	79	54	0	0	2
SC-T1-6_contig.fa_viral_188	0	4	1	3	5	12	17	39	52	18	41	15	0	0	0	63	0	14	1	216	337	20	10	3
SC-T1-6_contig.fa_viral_189	36	77	76	21	10	50	44	45	9	0	1	4	15	18	9	26	13	11	39	149	50	36	94	53
SC-T1-6_contig.fa_viral_190	0	1	0	0	0	2	0	2	1	0	0	1	0	0	0	0	0	0	1	117	2	1	1	1
SC-T1-6_contig.fa_viral_191	38	22	31	29	15	44	25	19	17	38	38	34	39	23	26	34	30	33	41	103	26	16	57	30
SC-T1-6_contig.fa_viral_192	0	4	2	15	6	58	6	5	6	1	2	0	0	0	0	6	1	1	10	180	26	4	35	25
SC-T1-6_contig.fa_viral_193	102	125	97	74	12	83	110	134	50	14	14	12	3	1	1	24	29	35	176	211	97	51	171	87
SC-T1-6_contig.fa_viral_194	10	40	12	76	11	37	199	134	74	34	20	15	0	0	0	151	7	57	74	162	274	158	145	51
SC-T1-6_contig.fa_viral_195	23	104	150	47	40	101	71	67	14	0	0	0	9	10	4	0	0	0	56	149	54	31	121	65
SC-T1-6_contig.fa_viral_196	7	6	7	0	0	1	17	33	0	0	0	0	0	0	0	0	0	0	5	68	58	30	26	16
SC-T1-6_contig.fa_viral_197	29	24	19	35	25	37	16	22	34	33	54	18	10	10	17	95	48	31	30	103	42	27	41	27
SC-T1-6_contig.fa_viral_198	0	3	6	4	2	4	1	3	0	1	6	0	0	1	0	2	3	1	8	87	3	0	2	0
SC-T1-6_contig.fa_viral_199	17	101	159	63	21	51	73	159	63	16	7	9	5	10	5	24	4	18	102	207	95	58	94	84
SC-T1-6_contig.fa_viral_200	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	82	0	0	0	0
SC-T1-6_contig.fa_viral_201	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	10	120	0	0	0	0
SC-T1-6_contig.fa_viral_202	1	2	0	1	1	0	1	1	2	0	0	0	0	0	0	0	0	0	51	73	96	0	1	0
SC-T1-6_contig.fa_viral_203	2	4	2	20	0	6	10	15	22	17	7	21	1	0	1	45	4	15	35	75	105	13	8	4
HP-T1-9_contig.fa_viral_168	14	13	5	11	12	22	8	19	29	42	92	199	15	16	30	73	20	35	19	17	23	20	27	10
HP-T1-9_contig.fa_viral_169	0	4	4	2	0	3	4	0	0	12	94	118	0	0	0	21	1	1	12	4	4	4	2	4
HP-T1-9_contig.fa_viral_170	8	8	2	6	3	4	2	3	4	6	25	170	0	2	0	94	13	2	3	2	0	3	14	8
HP-T1-9_contig.fa_viral_171	0	0	0	0	0	0	0	0	0	0	18	108	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_172	27	44	23	41	15	29	34	39	27	54	82	87	13	10	5	38	30	34	44	25	19	26	64	26
HP-T1-9_contig.fa_viral_173	2	8	2	4	2	0	5	6	12	136	51	185	0	0	0	476	62	31	11	31	37	7	10	6
HP-T1-9_contig.fa_viral_174	0	0	0	0	0	0	0	0	0	0	0	2261	0	0	0	1	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_175	0	0	0	0	0	0	0	0	0	1	0	162	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_176	0	0	0	0	0	0	0	0	0	0	0	133	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_177	3	3	0	2	1	1	4	3	4	95	64	143	1	1	1	403	38	25	2	3	2	2	11	2
HP-T1-9_contig.fa_viral_178	1	3	0	10	0	8	0	4	10	87	33	135	0	0	0	438	45	38	3	1	2	2	0	0
HP-T1-9_contig.fa_viral_179	0	0	0	0	0	0	0	0	0	0	0	167	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_180	0	0	0	0	0	0	0	0	0	0	0	136	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_181	16	12	1	8	2	1	1	2	1	11	8	66	0	1	5	5	11	8	1	2	1	3	10	11
HP-T1-9_contig.fa_viral_182	0	0	0	0	0	0	0	0	0	0	0	579	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_183	0	0	0	0	0	0	0	0	0	0	0	321	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_184	0	0	0	1	0	1	0	8	5	13	110	189	0	0	0	41	10	6	6	3	5	4	3	2
HP-T1-9_contig.fa_viral_185	0	0	0	0	0	0	0	0	0	0	24	139	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_186	0	0	0	0	0	0	0	0	0	1	233	1320	0	0	0	0	0	0	0	0	3	0	0	0
HP-T1-9_contig.fa_viral_187	113	46	38	39	23	23	44	23	38	105	67	145	41	34	17	119	255	145	68	24	20	32	137	46
HP-T1-9_contig.fa_viral_188	0	0	0	0	0	0	0	0	0	1	0	110	0	0	0	0	0	0	1	0	0	0	0	0
HP-T1-9_contig.fa_viral_189	0	0	0	0	0	0	0	0	0	2	0	181	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_190	0	0	0	0	0	0	0	0	0	0	45	136	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_191	0	0	0	0	0	0	0	0	0	0	0	121	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_192	51	84	95	57	70	89	55	65	46	39	92	217	98	50	60	141	304	150	162	87	67	57	124	74
HP-T1-9_contig.fa_viral_194	15	11	6	10	9	6	7	9	11	11	30	137	0	8	0	191	19	8	10	6	4	3	20	14
HP-T1-9_contig.fa_viral_195	4	3	4	2	3	0	1	4	1	7	17	73	1	2	2	13	5	5	1	3	2	1	3	3
HP-T1-9_contig.fa_viral_196	0	0	0	0	0	0	0	0	0	10	0	81	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_197	1	0	1	1	2	1	0	1	3	7	86	524	0	0	0	8	0	0	1	0	0	0	0	1
HP-T1-9_contig.fa_viral_198	0	0	0	0	0	0	2	0	2	53	73	119	0	0	0	95	104	48	4	0	7	0	0	0
HP-T1-9_contig.fa_viral_199	2	3	2	3	3	1	2	0	8	19	243	415	1	1	2	67	5	16	15	15	17	5	3	1
HP-T1-9_contig.fa_viral_200	0	0	0	0	0	0	0	0	0	0	1	206	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_201	5	0	0	0	0	0	2	0	1	11	27	57	0	0	0	21	50	22	2	0	2	0	11	2
HP-T1-9_contig.fa_viral_202	0	0	0	0	0	0	2	2	3	7	96	103	0	0	0	6	0	2	2	1	4	0	2	0
HP-T1-9_contig.fa_viral_204	0	0	0	0	0	0	0	0	1	15	27	79	0	0	0	24	2	2	0	1	3	3	0	0
HP-T1-9_contig.fa_viral_205	0	0	0	0	0	0	0	0	0	0	43	115	1	0	0	0	0	0	0	2	0	0	0	0
HP-T1-9_contig.fa_viral_206	25	10	2	3	4	6	11	6	5	43	63	113	3	3	2	81	156	49	26	4	12	2	33	17
HP-T1-9_contig.fa_viral_207	0	0	0	0	0	0	0	0	0	0	1	67	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_208	2	0	0	0	0	0	0	0	2	10	19	85	0	0	0	30	2	6	0	2	2	2	0	1
HP-T1-9_contig.fa_viral_210	11	17	3	15	3	17	18	7	7	10	121	133	3	1	0	13	24	11	13	6	5	5	107	78
HP-T1-9_contig.fa_viral_211	0	0	0	0	0	0	0	0	0	0	0	199	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_212	0	0	0	0	0	0	0	0	0	0	0	92	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_213	22	34	17	30	14	23	7	17	25	66	358	990	8	8	6	82	37	30	45	38	29	24	26	24
HP-T1-9_contig.fa_viral_214	3	3	2	5	1	2	0	1	3	40	44	294	0	0	2	30	19	16	3	0	3	3	3	1
HP-T1-9_contig.fa_viral_215	0	0	1	0	0	0	0	0	0	0	0	74	0	0	0	0	0	0	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_216	11	3	0	4	1	7	4	0	13	15	49	82	0	1	1	5	17	3	0	1	0	1	1	2
HP-T1-9_contig.fa_viral_217	1	3	0	1	0	0	1	1	0	1	7	65	0	0	0	2	0	1	2	0	1	0	1	0
HP-T1-9_contig.fa_viral_218	16	28	35	31	17	41	24	18	20	49	70	135	4	12	19	35	13	9	50	23	16	23	39	21
HP-T1-9_contig.fa_viral_219	0	1	0	0	0	0	0	0	0	1	84	437	0	0	0	4	0	0	5	0	0	0	0	0
HP-T1-9_contig.fa_viral_220	0	0	1	0	0	0	0	0	0	0	22	86	0	0	0	0	0	0	1	0	0	0	0	0
HP-T1-9_contig.fa_viral_221	0	0	0	0	0	0	0	0	0	5	0	117	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_222	0	0	0	0	0	0	0	0	0	2	0	171	0	0	0	0	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_223	2	0	0	0	1	0	0	3	1	85	68	85	0	0	0	319	13	21	4	3	4	1	3	0
RP-T1-6_contig.fa_viral_75	2	3	1	6	0	6	6	2	12	35	42	32	0	0	0	196	126	35	34	12	38	5	4	2
RP-T1-6_contig.fa_viral_77	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	65	22	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_78	177	24	6	35	6	24	33	13	18	31	27	31	4	2	3	69	216	131	33	6	16	17	87	52
RP-T1-6_contig.fa_viral_79	15	8	11	15	2	9	20	20	7	27	20	37	4	1	4	133	233	100	21	19	10	5	30	10
RP-T1-6_contig.fa_viral_80	5	4	0	0	0	0	2	4	0	9	9	7	0	1	0	20	91	70	3	0	0	0	8	3
RP-T1-6_contig.fa_viral_81	55	6	1	8	2	11	8	5	10	42	12	39	1	2	0	60	194	109	12	0	13	3	23	16
RP-T1-6_contig.fa_viral_82	3	1	0	3	0	0	4	2	0	6	1	1	0	0	0	103	263	184	0	1	0	2	2	0
RP-T1-6_contig.fa_viral_83	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	31	108	33	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_84	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	157	120	63	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_85	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	318	149	37	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_86	2	1	0	1	0	0	0	0	1	0	1	2	0	1	0	6	62	27	0	0	0	2	0	0
RP-T1-6_contig.fa_viral_87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_88	4	7	4	4	3	4	7	5	3	8	6	10	2	2	4	13	174	82	6	4	6	4	15	9
RP-T1-6_contig.fa_viral_89	286	265	198	135	129	161	91	56	76	170	384	218	167	93	98	376	517	271	143	105	44	105	304	148
RP-T1-6_contig.fa_viral_90	8	1	1	1	0	4	2	1	0	1	2	9	2	2	2	16	118	61	7	5	0	2	4	2
RP-T1-6_contig.fa_viral_91	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	489	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_92	4	0	0	1	2	1	0	2	3	9	9	19	0	5	1	20	113	33	0	1	0	0	3	1
RP-T1-6_contig.fa_viral_93	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	159	47	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	191	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_95	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	84	12	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_96	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	25	110	34	6	0	0	0	1	0
RP-T1-6_contig.fa_viral_97	3	1	0	2	0	1	1	1	1	13	27	66	0	0	1	33	111	44	5	4	1	9	9	4
RP-T1-6_contig.fa_viral_98	23	12	3	17	5	6	17	13	21	42	66	102	1	2	0	100	101	70	23	20	12	12	62	17
RP-T1-6_contig.fa_viral_99	23	25	16	16	9	12	13	20	4	14	12	28	20	26	8	17	126	48	36	16	11	10	49	17
RP-T1-6_contig.fa_viral_100	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	87	4	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_101	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	160	40	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_102	19	25	13	26	2	10	59	42	16	9	13	58	0	1	0	68	148	88	28	25	13	32	85	31
RP-T1-6_contig.fa_viral_103	1	0	1	2	0	2	1	1	0	6	1	2	0	0	1	16	122	32	1	1	0	1	1	3
RP-T1-6_contig.fa_viral_104	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	4	71	48	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_105	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	127	24	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_106	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	74	31	0	0	0	1	1	0
RP-T1-6_contig.fa_viral_107	33	29	8	32	15	20	29	19	16	19	27	48	12	10	7	132	304	128	55	21	20	12	70	38
RP-T1-6_contig.fa_viral_108	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	106	9	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_109	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	192	3	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_110	39	34	18	31	25	32	15	19	16	25	43	48	40	28	38	48	115	45	32	7	13	16	75	29
RP-T1-6_contig.fa_viral_111	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	208	54	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_112	0	0	2	2	0	2	2	1	2	0	0	5	0	0	0	307	111	93	0	0	2	1	0	0
RP-T1-6_contig.fa_viral_113	1	0	0	0	0	0	2	0	0	0	0	5	0	0	0	87	107	60	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_114	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	30	121	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_116	53	78	40	41	26	68	37	44	40	59	34	17	7	8	16	313	192	74	36	48	28	43	74	74
RP-T1-6_contig.fa_viral_117	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	217	69	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_118	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	391	5	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_119	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	167	40	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_120	0	0	0	0	0	0	0	0	0	10	12	7	0	0	0	18	85	43	0	1	0	0	0	0
RP-T1-6_contig.fa_viral_121	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	112	38	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_122	4	6	5	5	2	8	2	1	0	12	32	42	4	1	1	93	120	57	8	11	13	3	14	5
RP-T1-6_contig.fa_viral_123	45	50	22	34	15	35	37	18	30	73	42	77	11	13	7	164	276	93	49	24	23	40	96	62
RP-T1-6_contig.fa_viral_124	2	0	0	1	1	0	0	0	0	2	2	13	0	0	0	42	143	29	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_125	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	88	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_126	11	6	4	15	3	8	20	17	6	7	13	23	7	2	0	132	296	116	36	19	8	8	29	7
RP-T1-6_contig.fa_viral_127	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	75	153	99	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_128	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	262	77	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_129	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	82	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_130	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	127	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_131	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	106	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_132	0	0	0	0	0	0	0	0	0	4	14	1	0	0	0	54	86	12	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_133	71	62	19	53	18	38	30	18	17	51	45	72	13	15	26	87	307	174	37	16	18	23	77	55
RP-T1-6_contig.fa_viral_134	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	356	9	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_135	53	67	49	35	4	26	121	89	31	20	13	45	0	2	0	57	124	81	68	46	34	68	170	52
RP-T1-6_contig.fa_viral_136	0	0	0	0	0	0	0	0	0	2	6	8	0	0	0	276	401	117	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_137	3	0	0	1	0	0	2	2	2	50	60	204	0	1	0	114	292	210	0	1	2	0	7	1
RP-T1-6_contig.fa_viral_138	53	33	26	19	14	15	7	8	6	12	36	27	15	14	15	53	125	58	20	10	2	15	38	20
RP-T1-6_contig.fa_viral_139	16	10	2	16	1	6	22	12	14	36	12	57	0	0	1	157	392	154	20	4	8	10	32	16
RP-T1-6_contig.fa_viral_140	34	7	4	8	7	8	6	8	23	45	84	174	2	1	0	547	363	34	45	2	12	16	16	8
RP-T1-6_contig.fa_viral_142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	147	409	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_143	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	143	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_144	5	0	0	0	0	1	1	0	0	3	2	22	0	1	1	5	51	9	5	0	4	0	7	0
RP-T1-6_contig.fa_viral_145	2	3	7	7	3	7	2	4	2	1	0	5	2	0	0	51	133	60	16	2	4	0	8	7
RP-T1-6_contig.fa_viral_146	20	11	3	8	1	5	7	2	0	10	24	40	2	1	1	31	139	72	9	6	3	6	35	17
RP-T1-6_contig.fa_viral_148	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	125	92	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_149	2	0	0	0	0	0	0	1	0	0	0	5	0	0	0	58	151	67	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_150	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	15	163	13	5	0	0	0	0	0
RP-T1-6_contig.fa_viral_152	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	54	132	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_153	4	10	3	7	2	12	7	9	12	1	4	1	1	6	0	24	77	45	2	2	4	6	33	16
RP-T1-6_contig.fa_viral_154	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	206	112	71	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_155	4	8	6	11	3	7	8	4	1	1	5	19	3	3	1	34	196	30	13	4	0	8	24	9
RP-T1-6_contig.fa_viral_156	0	1	0	1	0	0	0	1	0	0	0	1	0	0	0	5	288	89	0	0	0	1	3	0
RP-T1-6_contig.fa_viral_157	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	190	335	111	0	1	0	0	0	0
RP-T1-9_contig.fa_viral_33	3	8	2	4	0	3	1	2	3	3	2	4	0	0	1	12	126	96	2	2	2	5	22	6
RP-T1-9_contig.fa_viral_34	25	5	3	1	3	2	1	1	3	4	8	24	2	0	1	15	121	110	1	1	0	0	5	3
RP-T1-9_contig.fa_viral_35	17	27	25	41	5	26	47	59	85	136	41	33	0	0	0	236	25	182	17	47	94	61	44	23
RP-T1-9_contig.fa_viral_36	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	3	72	74	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_37	2	3	0	2	0	1	1	3	0	12	10	32	0	0	0	36	274	154	4	4	0	1	7	2
RP-T1-9_contig.fa_viral_38	1	1	2	1	0	0	0	0	0	65	23	35	0	0	0	33	83	95	2	0	1	0	0	0
RP-T1-9_contig.fa_viral_39	5	5	4	17	2	3	3	18	11	5	5	10	1	4	0	133	49	69	4	6	14	7	13	9
RP-T1-9_contig.fa_viral_40	65	53	53	31	12	52	55	86	20	16	12	7	9	6	7	139	121	72	53	62	52	43	105	56
RP-T1-9_contig.fa_viral_41	34	48	52	46	40	66	36	28	27	20	13	12	27	43	11	65	159	76	21	19	5	34	91	52
RP-T1-9_contig.fa_viral_42	93	80	55	102	20	44	109	79	98	83	56	181	25	30	12	291	656	402	101	53	44	64	249	108
RP-T1-9_contig.fa_viral_44	0	0	0	0	0	0	0	0	0	1	1	2	0	1	0	2	24	116	2	0	0	0	1	0
RP-T1-9_contig.fa_viral_46	13	8	5	11	4	3	9	16	12	17	10	30	1	0	0	70	163	98	23	9	10	8	34	16
RP-T1-9_contig.fa_viral_47	0	0	1	8	1	10	9	2	24	31	1	2	0	0	0	48	5	57	3	6	4	3	3	0
RP-T1-9_contig.fa_viral_48	1	3	2	9	0	5	25	13	42	106	17	21	0	0	0	440	26	215	7	14	29	15	15	4
RP-T1-9_contig.fa_viral_49	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	177	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_50	1	20	7	28	7	26	21	25	90	92	24	40	0	0	0	196	21	134	13	41	60	36	25	7
RP-T1-9_contig.fa_viral_51	16	15	17	24	17	28	14	22	20	38	34	33	10	14	19	137	133	94	35	28	21	21	38	14
RP-T1-9_contig.fa_viral_52	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	25	3	94	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_54	0	0	0	9	0	7	6	7	11	41	6	0	0	0	0	64	16	68	1	0	3	3	1	1
RP-T1-9_contig.fa_viral_55	0	3	1	2	1	4	5	3	45	83	32	6	0	0	0	496	1	98	8	10	16	5	3	0
RP-T1-9_contig.fa_viral_56	16	3	2	3	0	3	5	1	2	4	8	20	0	1	0	17	162	243	1	0	0	0	6	1
RP-T1-9_contig.fa_viral_57	7	2	0	1	0	0	0	1	0	2	6	4	0	1	0	2	27	150	0	0	1	1	0	0
SC-T1-3_contig.fa_viral_73	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	180	0	0	0	0	0
SC-T1-3_contig.fa_viral_74	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	108	0	0	0	0	0
SC-T1-3_contig.fa_viral_75	1	3	2	7	0	2	0	2	0	0	0	0	2	3	0	0	0	0	123	1	0	0	3	0
SC-T1-3_contig.fa_viral_76	7	1	9	4	1	4	2	3	8	2	3	16	1	2	0	3	11	5	103	2	1	5	1	4
SC-T1-3_contig.fa_viral_77	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	171	2	0	0	0	2
SC-T1-3_contig.fa_viral_78	0	0	0	0	0	0	1	14	3	0	3	0	0	0	0	0	0	0	150	7	3	0	8	0
SC-T1-3_contig.fa_viral_79	0	8	26	3	2	0	6	20	0	0	0	0	0	0	0	0	0	0	110	17	7	6	4	5
SC-T1-3_contig.fa_viral_80	10	64	59	18	3	26	50	113	26	2	5	8	1	0	0	0	0	0	71	84	60	33	84	44
SC-T1-3_contig.fa_viral_81	17	13	18	21	9	29	16	16	20	23	23	23	7	9	10	21	68	51	194	13	16	12	45	29
SC-T1-3_contig.fa_viral_82	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	87	0	0	0	0	0
SC-T1-3_contig.fa_viral_83	0	4	11	4	17	10	6	5	3	6	0	0	6	1	3	1	7	3	142	6	4	2	6	6
SC-T1-3_contig.fa_viral_84	10	83	294	23	22	87	45	114	0	0	0	0	0	0	0	0	0	0	168	74	28	91	62	38
SC-T1-3_contig.fa_viral_85	49	142	224	77	34	99	62	99	19	6	1	1	14	1	1	2	8	2	102	91	54	44	176	109
SC-T1-3_contig.fa_viral_86	45	192	333	103	40	110	169	207	2	0	0	0	0	0	0	0	0	0	149	149	34	144	305	213
SC-T1-3_contig.fa_viral_87	15	29	19	16	11	28	13	19	13	22	31	21	6	6	7	20	2	9	76	15	12	13	26	13
SC-T1-3_contig.fa_viral_88	5	18	6	25	3	12	44	41	28	12	1	0	0	0	0	10	7	8	162	56	65	37	51	21
SC-T1-3_contig.fa_viral_89	57	40	40	28	11	45	54	57	37	27	18	30	14	6	5	39	34	21	102	62	60	32	107	28
SC-T1-3_contig.fa_viral_90	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	75	0	0	0	0	0
SC-T1-3_contig.fa_viral_91	7	17	3	10	4	8	23	26	25	69	13	8	0	0	0	31	14	16	148	62	76	37	45	25
SC-T1-3_contig.fa_viral_92	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	73	0	0	0	0	0
SC-T1-3_contig.fa_viral_93	6	14	9	2	3	5	57	118	4	4	0	5	0	0	0	1	0	1	157	273	185	17	29	6
SC-T1-3_contig.fa_viral_94	71	77	86	59	18	24	71	85	19	13	24	42	14	5	4	58	109	63	160	134	49	69	265	109
SC-T1-3_contig.fa_viral_95	18	3	4	4	0	5	4	2	5	0	0	1	3	4	4	0	2	1	153	3	5	1	17	10
SC-T1-3_contig.fa_viral_96	18	27	24	27	10	33	47	52	18	5	2	4	21	27	12	4	10	5	69	59	41	12	57	22
SC-T1-3_contig.fa_viral_97	10	14	10	44	6	21	33	52	55	33	28	39	0	0	0	187	28	55	243	226	420	35	34	22
SC-T1-3_contig.fa_viral_98	0	1	1	1	0	0	0	2	0	0	0	0	6	1	0	0	0	0	153	0	0	0	2	6
SC-T1-3_contig.fa_viral_99	0	1	2	0	4	12	4	18	0	0	0	0	0	0	1	0	0	0	79	11	2	6	4	5
SC-T1-3_contig.fa_viral_100	3	18	10	8	12	17	7	8	9	15	9	5	11	5	31	11	6	6	711	14	9	7	11	8
SC-T1-3_contig.fa_viral_101	1	6	6	7	0	6	5	11	16	0	1	8	0	0	0	3	1	0	86	10	11	7	12	5
SC-T1-3_contig.fa_viral_102	17	7	3	11	4	5	46	22	6	3	4	20	3	1	0	23	67	26	95	42	18	19	81	16
SC-T1-3_contig.fa_viral_103	2	14	27	3	4	2	0	36	0	0	0	0	0	0	0	1	0	0	229	28	9	4	0	3
UAB-T1-6_contig.fa_viral_136	128	358	621	128	50	162	263	311	31	1	2	4	18	24	17	5	2	2	167	184	68	163	400	375
UAB-T1-6_contig.fa_viral_137	1	7	1	7	0	5	2	1	0	0	4	0	0	0	0	0	2	1	2	0	5	4	72	50
UAB-T1-6_contig.fa_viral_138	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	271	3
UAB-T1-6_contig.fa_viral_139	4	17	6	3	1	3	4	6	1	3	0	1	21	17	2	0	0	0	0	0	0	4	73	5
UAB-T1-6_contig.fa_viral_140	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	86	0
UAB-T1-6_contig.fa_viral_141	14	23	16	18	3	12	12	29	15	4	4	11	10	1	9	12	5	6	17	10	0	33	77	49
UAB-T1-6_contig.fa_viral_142	7	12	5	19	1	0	3	11	0	3	6	4	0	1	0	14	13	4	5	4	3	12	125	79
UAB-T1-6_contig.fa_viral_143	9	11	4	10	1	3	6	7	0	0	0	0	2	0	0	1	0	0	4	0	4	12	196	94
UAB-T1-6_contig.fa_viral_144	55	58	32	46	6	81	85	74	19	5	8	5	0	0	0	11	7	9	74	86	26	31	254	104
UAB-T1-6_contig.fa_viral_145	3	6	0	0	1	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	205	107
UAB-T1-6_contig.fa_viral_146	5	31	25	22	10	34	46	40	16	0	5	5	0	0	0	0	0	0	39	26	35	24	64	30
UAB-T1-6_contig.fa_viral_148	43	81	8	55	11	15	39	22	0	2	3	0	20	2	4	1	3	4	11	12	2	73	235	135
UAB-T1-6_contig.fa_viral_149	88	141	45	46	2	9	50	32	1	13	6	10	1	4	2	11	20	18	28	8	0	130	140	125
UAB-T1-6_contig.fa_viral_150	4	0	0	1	0	2	0	1	0	0	0	1	2	1	0	1	0	1	5	1	1	1	110	25
UAB-T1-6_contig.fa_viral_151	18	67	96	11	3	7	19	101	0	3	0	1	0	0	0	0	0	0	14	0	1	83	68	48
UAB-T1-6_contig.fa_viral_152	8	38	4	2	0	2	13	11	0	0	0	0	17	16	8	0	2	1	0	0	4	2	150	12
UAB-T1-6_contig.fa_viral_153	3	4	5	3	0	1	2	5	2	0	4	6	3	4	6	7	4	0	1	1	0	1	62	5
UAB-T1-6_contig.fa_viral_154	32	36	5	60	12	51	39	28	28	16	22	13	0	2	0	5	7	2	27	22	21	28	137	58
UAB-T1-6_contig.fa_viral_155	21	50	60	7	4	15	90	87	6	1	0	0	7	4	5	3	0	2	3	6	2	35	70	52
UAB-T1-6_contig.fa_viral_156	9	13	3	14	1	0	2	1	0	0	0	0	2	2	0	0	0	0	1	1	2	7	176	125
UAB-T1-6_contig.fa_viral_157	49	81	77	35	12	20	44	117	0	0	0	0	1	0	0	1	2	1	48	90	18	116	190	136
UAB-T1-6_contig.fa_viral_158	0	0	0	2	0	0	1	11	16	0	29	0	0	0	0	0	0	0	158	8	28	0	626	0
UAB-T1-6_contig.fa_viral_159	23	63	46	23	19	27	33	60	22	15	29	18	12	3	6	55	17	16	76	48	56	121	99	61
UAB-T1-6_contig.fa_viral_160	16	12	0	7	0	5	1	8	0	3	3	1	0	0	0	2	5	1	3	2	0	5	64	17
UAB-T1-6_contig.fa_viral_161	22	45	4	57	1	21	42	31	6	1	1	2	0	1	0	2	4	2	6	4	0	28	169	93
UAB-T1-6_contig.fa_viral_162	69	46	5	42	2	6	25	17	9	2	0	4	0	1	1	10	9	6	28	30	11	32	102	62
UAB-T1-6_contig.fa_viral_163	51	115	82	137	100	164	54	76	83	96	119	57	92	176	65	85	25	35	92	45	37	77	248	116
UAB-T1-6_contig.fa_viral_164	0	1	0	6	1	5	1	2	2	0	2	1	4	22	0	0	0	0	0	0	0	2	83	1
UAB-T1-6_contig.fa_viral_165	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	72	0
UAB-T1-6_contig.fa_viral_166	15	16	1	2	4	2	3	2	0	1	1	0	49	36	33	7	20	3	20	3	0	2	388	4
UAB-T1-6_contig.fa_viral_167	2	0	0	2	0	0	7	4	0	0	0	0	0	0	0	1	5	5	0	0	0	0	161	23
UAB-T1-6_contig.fa_viral_168	31	16	15	10	14	24	11	8	10	16	14	18	9	21	32	30	15	23	18	13	11	10	50	24
UAB-T1-6_contig.fa_viral_169	4	16	4	5	0	3	10	19	2	0	0	0	1	0	0	0	0	0	1	6	4	2	190	9
UAB-T1-6_contig.fa_viral_170	12	28	16	11	8	9	16	12	3	2	4	8	47	21	5	4	1	2	1	4	5	5	172	19
UAB-T1-6_contig.fa_viral_171	105	308	110	60	1	7	47	58	0	0	0	0	1	1	0	0	0	0	22	6	0	247	268	328
UAB-T1-6_contig.fa_viral_172	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	0
UAB-T1-6_contig.fa_viral_173	108	166	72	44	4	22	41	45	3	0	4	1	4	5	0	10	11	3	19	8	5	196	244	224
UAB-T1-6_contig.fa_viral_174	4	18	8	45	8	25	154	113	38	10	6	11	0	0	0	48	2	24	25	65	172	101	140	32
UAB-T1-6_contig.fa_viral_175	14	14	5	29	0	16	7	3	1	2	7	7	0	0	2	6	13	0	0	0	2	9	119	41
UAB-T1-6_contig.fa_viral_176	7	18	3	25	1	12	17	12	2	0	11	3	0	0	0	0	6	0	4	0	6	15	68	59
UAB-T1-6_contig.fa_viral_177	82	71	18	19	10	15	15	15	9	9	30	20	5	7	10	27	65	23	13	7	6	20	131	24
UAB-T1-6_contig.fa_viral_178	82	72	40	38	11	59	23	44	13	15	11	10	14	11	0	49	24	19	18	31	13	22	148	54
UAB-T1-6_contig.fa_viral_179	10	23	0	43	1	4	11	10	0	1	0	0	0	0	0	0	0	0	13	11	8	21	68	24
UAB-T1-6_contig.fa_viral_180	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	9	3	2	0	152	0
UAB-T1-6_contig.fa_viral_181	17	17	18	16	9	14	11	5	4	3	2	9	18	8	2	8	4	3	8	9	8	11	63	25
UAB-T1-6_contig.fa_viral_182	4	10	0	11	1	11	4	1	4	0	5	0	0	0	0	4	2	2	0	2	0	7	90	44
UAB-T1-6_contig.fa_viral_183	11	77	39	66	62	340	69	165	167	31	36	2	1	3	1	41	0	28	40	150	113	93	222	167
UAB-T1-6_contig.fa_viral_184	81	125	77	77	13	97	222	164	60	11	12	22	0	1	0	24	19	6	223	196	236	51	166	74
UAB-T1-6_contig.fa_viral_185	86	25	0	40	1	21	17	14	6	5	2	0	0	0	0	1	14	3	17	11	5	19	97	37
UAB-T1-6_contig.fa_viral_186	29	21	3	14	5	12	18	9	6	14	14	21	0	0	2	30	27	5	29	10	13	7	189	80
UAB-T1-6_contig.fa_viral_187	4	9	2	13	0	0	9	5	0	0	0	1	0	0	0	0	0	0	2	0	1	0	78	39
UAB-T1-6_contig.fa_viral_188	50	24	5	39	6	13	18	13	6	7	8	11	0	3	0	20	43	16	11	6	4	19	107	39
UAB-T1-6_contig.fa_viral_189	0	1	0	0	0	0	8	2	0	0	0	0	0	0	0	0	0	0	4	0	3	0	91	17
UAB-T1-6_contig.fa_viral_190	43	94	103	43	15	31	93	81	3	1	6	7	1	0	0	1	1	0	52	60	24	91	209	163
UAB-T1-6_contig.fa_viral_191	12	18	4	12	5	13	11	10	2	4	1	2	15	14	3	0	3	3	5	3	1	2	134	23
UAB-T1-6_contig.fa_viral_192	38	83	106	46	2	15	41	97	0	0	0	0	2	0	0	0	0	0	63	61	13	74	133	108
UAB-T1-6_contig.fa_viral_193	87	23	1	36	5	13	37	16	14	4	4	3	0	0	0	1	10	3	27	8	12	14	103	39
UAB-T1-6_contig.fa_viral_194	27	74	69	25	7	24	63	87	3	3	11	12	0	1	0	2	4	7	50	38	21	81	184	75
UAB-T1-6_contig.fa_viral_195	3	14	7	60	5	23	207	102	40	9	5	10	0	0	0	28	1	16	47	99	193	103	134	35
UAB-T1-6_contig.fa_viral_196	36	46	22	40	11	31	43	32	48	40	24	53	10	7	2	80	153	76	50	29	23	23	298	60
UAB-T1-6_contig.fa_viral_197	28	20	0	39	2	18	22	24	2	5	1	3	0	0	0	4	2	4	11	4	1	15	122	39
UAB-T1-6_contig.fa_viral_198	20	57	74	26	7	27	364	507	17	13	8	6	0	2	10	9	14	6	277	619	374	94	95	54
UAB-T1-6_contig.fa_viral_199	1	1	0	3	1	1	11	4	6	1	1	5	0	2	1	3	16	6	1	1	0	3	211	23
UAB-T1-6_contig.fa_viral_200	23	57	7	67	3	22	60	40	4	2	3	4	2	2	2	4	8	2	10	8	3	49	246	201
UAB-T1-6_contig.fa_viral_201	0	0	0	0	0	1	1	0	0	0	2	4	0	0	0	0	4	0	0	0	0	0	98	4
UAB-T1-6_contig.fa_viral_202	23	70	76	38	6	47	68	120	0	0	0	0	0	0	0	0	0	0	37	28	7	85	155	87
UAB-T1-6_contig.fa_viral_204	3	14	12	41	8	12	125	72	42	1	0	2	0	0	0	0	0	1	31	80	134	99	97	12
UAB-T1-6_contig.fa_viral_206	42	25	21	21	15	31	18	14	23	23	29	31	14	9	8	31	31	26	28	20	21	32	198	119
UAB-T1-6_contig.fa_viral_207	0	0	0	1	0	0	1	0	1	0	31	7	0	0	0	0	0	0	30	9	15	0	90	0
HP-T1-9_contig.fa_viral_394	3	0	1	2	0	5	6	3	8	16	64	122	0	0	0	46	6	11	12	12	40	9	9	3
HP-T1-9_contig.fa_viral_395	0	0	0	0	0	0	0	0	0	0	64	360	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_396	0	0	0	0	0	0	0	0	0	0	0	138	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_397	0	0	0	1	0	1	0	0	3	10	81	85	0	0	0	8	1	3	8	2	3	0	2	2
HP-T1-9_contig.fa_viral_398	0	0	0	0	0	0	0	0	0	3	37	106	0	0	0	1	0	4	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_399	0	0	0	0	0	0	0	0	0	63	11	126	0	0	0	11	6	0	1	0	0	0	0	0
HP-T1-9_contig.fa_viral_400	0	1	0	0	0	2	2	1	0	18	91	264	0	0	0	118	2	6	3	2	24	0	1	0
HP-T1-9_contig.fa_viral_401	1	0	0	0	0	2	1	0	1	197	106	301	0	0	0	714	90	50	0	0	1	0	1	0
HP-T1-9_contig.fa_viral_402	0	0	0	0	0	0	0	0	0	1	234	608	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_403	1	0	0	0	0	0	0	0	0	12	6	82	0	0	0	22	7	3	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_404	0	0	0	0	0	0	0	0	1	0	0	119	0	0	0	1	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_405	5	4	4	2	1	1	2	4	4	16	36	55	1	4	0	38	73	37	2	2	1	0	11	1
HP-T1-9_contig.fa_viral_406	0	1	1	1	0	0	0	0	0	0	0	70	0	0	0	0	1	0	1	0	0	0	0	1
HP-T1-9_contig.fa_viral_407	2	4	4	4	3	3	1	3	4	10	5	84	1	1	2	4	8	4	2	5	3	2	6	3
HP-T1-9_contig.fa_viral_408	1	0	0	0	0	0	0	0	0	0	10	61	0	1	0	3	5	5	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_409	0	0	0	0	0	0	0	0	0	0	13	115	0	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_provirus_1	2	0	3	0	0	5	2	0	2	1	0	0	54	11	15	2	0	2	3	1	0	1	5	2
RC-T1-3_contig.fa_viral_1	1	1	2	2	0	2	0	2	0	0	0	0	127	24	14	0	1	0	2	2	0	0	2	0
RC-T1-3_contig.fa_viral_2	0	1	1	0	0	1	0	0	2	0	2	9	130	0	10	0	1	0	0	1	0	1	0	3
RC-T1-3_contig.fa_viral_3	0	0	0	0	0	0	0	0	0	0	0	0	241	10	25	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_4	0	0	0	0	1	1	0	0	0	0	0	0	119	54	38	0	0	0	1	2	0	0	0	0
RC-T1-3_contig.fa_viral_5	0	17	28	7	9	10	10	17	0	0	0	0	69	28	30	0	0	1	15	20	4	8	9	8
RC-T1-3_contig.fa_viral_6	0	0	0	0	0	0	0	0	0	0	2	0	104	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_7	0	0	0	0	0	0	0	0	0	0	0	0	85	27	5	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_8	1	3	8	4	6	13	4	3	12	12	1	1	118	49	35	9	6	0	3	4	5	2	2	5
RC-T1-3_contig.fa_viral_9	10	20	26	18	2	22	27	33	8	1	0	0	135	32	9	1	1	3	17	17	14	16	43	24
RC-T1-3_contig.fa_viral_10	0	0	0	1	0	0	0	0	0	0	0	0	89	56	31	0	0	0	3	0	0	0	0	0
RC-T1-3_contig.fa_viral_11	4	18	5	2	0	2	5	9	2	2	3	0	137	94	28	0	5	0	1	6	3	4	10	4
RC-T1-3_contig.fa_viral_12	0	0	0	0	0	0	0	0	0	0	0	0	93	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_13	0	2	0	0	0	0	0	0	0	0	0	0	1179	4	0	0	4	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_14	60	93	43	86	54	83	51	54	25	26	37	32	160	113	55	50	50	40	84	48	22	59	167	113
RC-T1-3_contig.fa_viral_15	0	0	2	0	0	0	0	0	0	0	0	0	48	13	2	0	0	0	0	1	0	0	0	0
RC-T1-3_contig.fa_viral_16	0	0	0	1	1	0	0	0	0	0	0	0	81	17	14	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_17	3	77	144	41	23	57	35	93	7	2	2	1	68	25	6	8	1	11	65	62	25	39	91	60
RC-T1-3_contig.fa_viral_18	0	1	5	2	2	0	1	0	0	0	0	0	163	66	73	0	0	1	0	1	0	1	0	0
RC-T1-3_contig.fa_viral_19	177	351	285	246	245	378	184	232	204	243	291	187	368	179	211	269	132	160	308	210	200	275	429	204
RC-T1-3_contig.fa_viral_20	1	0	1	0	1	1	2	2	1	0	0	1	71	26	2	0	0	0	0	1	0	2	2	2
RC-T1-3_contig.fa_viral_21	0	0	0	0	0	0	0	0	0	0	0	0	340	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_22	0	45	94	31	65	78	7	11	1	0	0	1	98	41	1	1	0	5	2	16	2	9	15	11
RC-T1-3_contig.fa_viral_23	0	0	0	0	0	0	0	0	0	0	0	0	176	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_24	0	0	0	0	0	0	0	0	0	0	0	0	66	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_25	0	0	0	0	0	0	0	0	0	0	0	0	92	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_26	0	0	0	0	0	0	0	0	0	0	0	0	77	8	1	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_27	0	0	0	0	0	0	0	0	0	0	0	0	122	0	4	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_28	2	4	0	7	0	4	4	1	0	3	2	3	82	15	6	2	1	1	6	3	0	2	5	3
RC-T1-3_contig.fa_viral_29	2	1	23	0	13	6	8	25	0	0	2	0	205	78	71	0	0	0	166	9	1	8	3	8
RC-T1-3_contig.fa_viral_30	0	2	5	1	21	9	0	3	5	0	1	0	184	112	55	2	1	0	1	3	1	2	3	1
RC-T1-3_contig.fa_viral_31	10	25	35	19	6	18	21	31	8	2	1	0	164	68	9	2	1	1	23	24	13	11	25	17
RC-T1-3_contig.fa_viral_32	1	1	2	1	0	3	1	3	1	0	1	0	189	144	109	0	0	1	8	2	4	0	3	6
RC-T1-3_contig.fa_viral_33	6	16	11	10	16	24	4	5	1	0	1	1	130	99	19	7	0	1	3	4	4	1	43	14
RC-T1-3_contig.fa_viral_34	0	0	0	0	0	0	0	0	0	0	0	0	759	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_35	2	1	3	1	1	3	1	0	2	0	1	1	96	28	12	2	0	1	4	5	2	1	10	1
RC-T1-3_contig.fa_viral_36	33	67	58	60	57	88	37	39	21	7	5	4	84	77	52	7	3	4	83	13	10	37	52	24
RC-T1-3_contig.fa_viral_37	0	0	0	1	3	2	2	1	0	1	1	0	168	76	19	0	0	0	0	0	2	1	4	0
RC-T1-3_contig.fa_viral_38	0	0	0	0	0	0	0	0	0	0	0	0	68	7	5	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_39	0	1	1	1	1	1	1	0	0	0	0	0	78	42	19	0	1	1	0	1	0	0	1	0
RC-T1-3_contig.fa_viral_40	0	0	0	0	0	0	3	0	2	1	0	0	578	2	0	0	0	0	0	0	0	1	2	1
RC-T1-3_contig.fa_viral_41	7	6	10	7	10	21	12	6	5	7	4	11	137	62	67	16	6	8	11	10	12	8	20	13
RC-T1-3_contig.fa_viral_42	103	197	185	177	139	260	122	197	165	164	183	132	133	87	101	207	60	79	208	210	206	186	239	152
RC-T1-3_contig.fa_viral_43	0	0	0	0	0	0	0	0	0	0	0	0	876	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_44	0	1	0	0	0	0	0	0	0	0	0	0	74	3	8	0	0	1	0	0	0	0	1	1
RC-T1-3_contig.fa_viral_45	0	0	0	0	0	0	0	0	0	0	0	0	79	0	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_46	3	6	3	10	7	6	2	1	1	1	0	1	285	116	21	2	2	1	2	1	0	3	6	3
RC-T1-3_contig.fa_viral_47	15	21	7	12	12	16	9	11	4	7	14	16	83	34	32	17	39	26	15	2	1	13	34	30
RC-T1-3_contig.fa_viral_48	0	0	2	0	0	1	1	0	0	0	0	0	110	27	16	0	0	0	0	0	2	0	1	0
RC-T1-3_contig.fa_viral_49	6	23	43	13	8	17	6	13	0	0	0	0	185	59	32	0	0	0	3	3	2	4	11	6
RC-T1-3_contig.fa_viral_50	0	0	0	0	0	0	0	0	0	0	0	0	74	30	3	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_51	0	0	2	0	3	1	0	0	0	0	0	0	73	54	19	0	0	1	0	0	1	0	0	0
RC-T1-3_contig.fa_viral_52	0	0	0	0	0	0	0	0	0	0	0	0	148	0	0	1	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_53	1	7	13	6	3	8	4	0	1	0	1	0	104	15	7	5	0	0	3	4	0	2	3	4
RC-T1-3_contig.fa_viral_54	1	1	15	3	7	5	2	2	0	0	2	0	207	68	13	0	0	0	0	0	0	2	4	6
RC-T1-3_contig.fa_viral_55	0	0	0	0	0	0	0	0	0	0	0	0	389	2	0	0	0	0	0	0	0	0	0	0
RC-T1-3_contig.fa_viral_56	0	0	0	0	0	0	0	0	0	0	0	0	141	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_76	1	0	0	0	0	0	0	0	0	0	128	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_77	0	0	0	2	0	5	0	0	2	31	113	109	0	0	0	14	1	7	0	3	4	0	2	0
HP-T1-6_contig.fa_viral_79	2	0	2	0	0	2	0	0	3	1	148	246	3	0	4	3	1	0	1	1	0	0	2	2
HP-T1-6_contig.fa_viral_80	0	0	0	0	0	0	0	0	0	0	125	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_81	0	4	2	2	0	2	4	16	10	67	64	46	0	0	0	79	15	21	2	22	25	7	8	2
HP-T1-6_contig.fa_viral_82	0	0	0	0	0	0	0	0	0	0	98	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_83	0	0	0	0	0	0	0	2	0	0	185	130	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_84	0	0	0	0	0	0	0	0	0	0	86	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_86	1	0	0	0	0	0	0	0	0	0	84	8	0	0	0	2	0	1	0	0	0	0	1	0
HP-T1-6_contig.fa_viral_87	0	0	0	0	0	0	0	0	1	5	147	100	0	0	1	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_88	0	0	0	0	0	0	0	0	0	0	160	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_89	0	0	0	0	0	0	0	0	0	0	624	1	0	0	0	0	0	0	4	2	0	0	0	2
HP-T1-6_contig.fa_viral_90	0	0	1	0	1	1	0	0	7	1	61	0	0	0	0	10	0	0	0	0	0	0	0	1
HP-T1-6_contig.fa_viral_91	0	0	0	0	0	0	0	0	1	0	288	2	0	0	0	0	0	0	1	0	0	0	0	0
HP-T1-6_contig.fa_viral_92	36	38	33	31	7	37	50	34	9	12	62	73	11	10	0	45	70	42	37	41	33	24	130	67
HP-T1-6_contig.fa_viral_93	0	0	0	0	0	2	2	0	34	146	196	23	0	0	0	213	0	10	1	4	12	1	0	0
HP-T1-6_contig.fa_viral_94	0	0	0	0	0	0	0	0	0	0	104	0	0	0	0	0	0	0	1	0	0	0	0	1
HP-T1-6_contig.fa_viral_95	0	0	0	0	0	0	0	0	0	0	83	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_96	0	1	0	2	0	3	2	11	5	19	92	72	0	0	0	37	2	8	21	12	33	6	4	2
HP-T1-6_contig.fa_viral_97	0	0	0	0	0	0	0	0	0	0	181	273	0	0	1	3	2	0	0	0	0	0	0	2
HP-T1-6_contig.fa_viral_98	1366	1337	794	1013	503	900	757	897	810	1325	1780	1973	607	421	494	2226	2995	1802	1216	992	960	780	2203	1170
HP-T1-6_contig.fa_viral_99	26	53	27	33	22	37	22	26	24	21	152	96	30	18	23	39	38	20	49	27	37	45	56	42
HP-T1-6_contig.fa_viral_100	334	360	254	283	185	364	240	249	189	342	496	414	183	152	141	422	532	366	309	277	233	250	606	343
HP-T1-6_contig.fa_viral_101	0	0	0	0	0	0	0	0	0	0	154	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_102	0	0	0	0	0	0	0	0	0	0	254	184	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_103	0	0	0	0	0	0	0	0	0	0	148	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_104	0	0	0	0	0	0	0	0	0	0	114	4	0	0	0	0	0	0	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_502	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	136	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_503	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	242	79	73	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_504	25	101	115	55	47	139	52	67	50	9	1	0	11	9	7	135	3	10	20	37	18	32	81	55
RP-T1-3_contig.fa_viral_505	0	3	0	0	1	1	2	0	2	24	14	36	1	0	0	189	7	25	0	0	2	1	2	2
RP-T1-3_contig.fa_viral_506	0	0	0	0	0	0	0	0	1	7	1	4	0	0	0	190	2	32	0	2	0	0	0	1
RP-T1-3_contig.fa_viral_507	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	193	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_508	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_509	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_510	4	7	2	1	1	2	0	0	0	0	4	1	0	2	0	190	1	1	4	3	2	1	2	1
RP-T1-3_contig.fa_viral_511	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	140	0	9	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_512	15	12	7	9	14	18	10	7	16	23	22	20	14	14	18	167	19	16	13	9	6	4	40	10
RP-T1-3_contig.fa_viral_513	2	7	11	5	0	6	9	18	24	101	14	20	0	0	0	169	7	95	15	13	22	7	12	6
RP-T1-3_contig.fa_viral_514	0	1	0	0	0	1	1	0	1	3	1	3	0	0	0	95	19	4	0	4	8	0	0	0
RP-T1-3_contig.fa_viral_515	0	0	0	0	0	0	0	0	0	12	2	0	0	0	0	83	4	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_516	1	0	3	1	0	0	3	5	12	13	0	4	0	0	0	140	1	31	4	33	17	0	0	0
RP-T1-3_contig.fa_viral_517	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	89	13	20	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_518	0	0	1	3	0	1	0	2	53	121	16	23	0	0	0	388	151	355	2	2	4	2	9	1
RP-T1-3_contig.fa_viral_519	0	0	0	0	0	0	2	2	2	0	4	0	0	0	0	314	2	42	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_520	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	185	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_521	98	75	32	52	25	55	53	31	55	172	201	232	40	27	13	517	192	106	84	54	51	39	126	98
RP-T1-3_contig.fa_viral_522	0	1	2	2	0	2	2	5	4	1	2	4	0	0	0	124	13	41	4	6	12	1	3	1
RP-T1-3_contig.fa_viral_523	0	0	0	1	0	1	7	7	10	6	8	19	0	0	0	77	5	1	8	46	65	3	2	2
RP-T1-3_contig.fa_viral_524	0	0	0	0	0	0	0	0	0	1	22	5	0	0	0	130	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_525	0	0	0	0	0	0	1	3	8	45	10	10	0	0	0	248	17	137	3	2	2	0	0	0
RP-T1-3_contig.fa_viral_526	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	384	6	3	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_527	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	69	2	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_528	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_529	5	1	4	10	2	6	7	9	26	54	21	21	0	0	0	91	9	10	19	8	12	24	14	11
RP-T1-3_contig.fa_viral_530	0	0	1	0	0	2	7	3	5	28	37	39	0	0	0	212	14	25	1	13	28	4	6	1
RP-T1-3_contig.fa_viral_531	2	4	3	23	1	17	9	0	36	57	12	5	0	0	0	200	11	41	4	12	17	11	6	6
RP-T1-3_contig.fa_viral_532	0	2	3	0	1	4	1	1	1	18	10	10	1	2	1	168	66	31	1	0	0	2	2	3
RP-T1-3_contig.fa_viral_533	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	157	0	13	0	0	2	1	1	1
RP-T1-3_contig.fa_viral_534	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77	0	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_535	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	120	57	12	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_536	0	0	0	0	0	0	1	0	0	6	4	0	0	0	0	62	12	1	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_537	1	5	1	5	0	4	11	15	4	17	31	23	0	0	0	111	0	8	50	29	37	10	9	7
RP-T1-3_contig.fa_viral_538	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	195	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_539	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	114	31	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_540	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	118	43	31	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_541	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	191	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_542	45	3	4	1	9	13	7	4	18	34	60	114	0	10	0	339	49	30	24	3	5	3	5	4
RP-T1-3_contig.fa_viral_543	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_544	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	267	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_545	4	3	2	6	5	7	2	0	6	8	8	0	8	4	7	77	53	48	5	2	1	1	4	3
RP-T1-3_contig.fa_viral_546	1	2	2	1	0	3	2	3	0	14	5	7	1	0	3	154	35	15	1	2	2	1	4	2
RP-T1-3_contig.fa_viral_547	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	86	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_548	0	5	1	5	2	5	6	7	6	4	5	3	1	3	2	87	13	10	6	2	5	2	7	1
RP-T1-3_contig.fa_viral_549	1	4	0	1	0	0	0	0	0	1	0	0	0	0	0	123	13	10	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_550	0	0	0	2	0	0	0	0	0	6	1	0	0	0	0	64	9	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_551	0	0	0	0	0	0	0	0	1	52	3	20	0	0	0	123	0	4	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_552	25	7	1	3	0	2	2	1	1	15	2	7	0	0	0	153	122	53	0	5	3	3	6	3
RP-T1-3_contig.fa_viral_553	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	65	24	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_554	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	129	4	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_555	0	1	0	1	0	0	1	0	0	4	6	6	0	0	0	178	6	3	1	1	1	0	3	2
RP-T1-3_contig.fa_viral_556	0	2	1	6	0	1	1	2	48	60	16	9	0	0	0	171	17	134	3	1	1	4	1	0
RP-T1-3_contig.fa_viral_557	0	4	0	7	3	6	9	7	19	35	24	56	0	0	0	257	34	60	13	26	28	10	7	5
RP-T1-3_contig.fa_viral_559	3	1	3	18	4	16	14	4	70	64	13	2	0	0	0	139	18	111	0	4	0	8	5	1
RP-T1-3_contig.fa_viral_560	0	0	0	2	0	0	0	0	1	10	23	18	0	0	0	101	20	15	2	2	4	0	2	0
RP-T1-3_contig.fa_viral_61	0	2	0	1	1	1	2	1	0	12	3	6	0	0	0	106	4	28	2	1	6	0	3	0
RP-T1-3_contig.fa_viral_62	2	2	5	0	1	0	1	2	0	40	0	0	0	0	0	171	0	9	1	6	2	1	3	0
RP-T1-3_contig.fa_viral_63	0	6	4	6	0	3	3	4	0	52	6	5	0	0	1	275	31	6	1	1	4	1	7	4
RP-T1-3_contig.fa_viral_64	0	0	0	0	1	0	0	0	1	7	1	0	0	0	0	62	5	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_65	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	283	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_66	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	104	9	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_67	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	154	0	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_68	3	0	0	0	0	0	0	0	0	4	0	0	0	0	0	71	12	2	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_69	0	0	0	0	0	2	0	0	0	0	5	3	0	0	0	271	33	46	0	0	0	0	0	1
RP-T1-3_contig.fa_viral_70	0	2	2	2	3	14	3	7	12	2	14	1	1	0	0	280	1	32	3	17	13	7	8	4
RP-T1-3_contig.fa_viral_71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	713	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_72	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	71	23	9	0	1	0	0	1	0
RP-T1-3_contig.fa_viral_73	0	0	0	0	0	0	0	0	0	3	2	15	0	0	0	289	136	34	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_74	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	95	8	0	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_75	0	0	1	1	0	1	1	1	30	50	11	27	0	0	0	153	24	88	4	10	14	1	1	0
RP-T1-3_contig.fa_viral_76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	120	21	45	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_77	11	0	0	0	0	0	0	0	0	33	5	6	0	0	0	440	0	5	0	0	0	2	1	2
RP-T1-3_contig.fa_viral_78	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	325	138	26	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_80	0	1	0	0	0	1	0	1	26	28	25	7	0	0	0	146	0	19	0	3	2	1	0	0
RP-T1-3_contig.fa_viral_81	1	7	1	5	2	2	7	3	8	13	10	19	1	1	2	109	20	38	3	2	4	4	7	8
RP-T1-3_contig.fa_viral_82	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	215	42	75	4	0	3	0	5	2
RP-T1-3_contig.fa_viral_83	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	128	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_84	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	144	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_85	7	24	13	12	15	97	30	43	54	13	29	4	1	1	11	121	2	30	21	57	39	21	45	34
RP-T1-3_contig.fa_viral_86	0	1	0	0	0	0	2	0	0	3	0	0	0	0	0	206	6	37	1	2	0	0	1	0
RP-T1-3_contig.fa_viral_87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	106	18	35	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_88	17	16	8	12	2	13	6	3	10	17	50	59	4	0	3	147	135	60	21	7	7	5	32	18
RP-T1-3_contig.fa_viral_89	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	278	141	89	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_90	8	1	3	3	9	6	4	6	5	3	2	0	0	4	2	57	25	11	2	3	3	1	4	2
RP-T1-3_contig.fa_viral_91	0	3	2	2	3	5	3	4	70	77	4	3	0	0	0	153	8	141	0	0	4	1	0	0
RP-T1-3_contig.fa_viral_92	0	0	0	0	0	0	0	0	0	24	4	1	0	0	0	258	24	28	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_93	5	8	6	8	3	7	1	0	1	3	8	6	0	0	0	100	28	10	4	3	2	6	6	5
RP-T1-3_contig.fa_viral_94	0	0	0	2	0	0	3	0	84	235	33	3	0	0	0	847	4	158	0	0	0	3	0	0
RP-T1-3_contig.fa_viral_95	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	96	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_96	19	16	7	5	6	6	5	6	21	28	15	27	1	10	5	132	20	34	17	10	11	4	17	9
RP-T1-3_contig.fa_viral_97	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	207	8	23	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_99	0	0	0	0	0	0	0	0	0	5	2	0	0	0	0	179	11	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_100	18	0	3	8	2	7	5	4	6	7	10	24	4	5	0	62	94	49	8	4	5	4	15	3
RP-T1-3_contig.fa_viral_101	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	159	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_102	1772	1701	1120	1134	760	1608	842	1022	1155	1216	1549	1062	1446	872	1286	2324	1480	1039	1286	1248	918	884	2299	1301
RP-T1-3_contig.fa_viral_103	10	17	12	12	13	24	11	17	11	4	4	14	3	5	9	278	50	39	11	6	6	19	23	18
Ex45-T1-9_contig.fa_viral_55	13	45	4	9	18	78	38	60	95	11	3	0	0	0	0	0	0	0	3	16	31	52	54	31
Ex45-T1-9_contig.fa_viral_56	0	1	0	0	0	1	1	7	110	134	30	10	0	0	0	298	5	61	0	0	4	9	1	1
Ex45-T1-9_contig.fa_viral_57	0	0	0	2	0	7	6	0	123	2	4	4	0	0	0	3	0	1	0	10	28	0	2	0
Ex45-T1-9_contig.fa_viral_58	1	6	1	17	5	32	18	7	263	76	10	17	0	0	0	85	16	57	9	20	29	17	15	3
Ex45-T1-9_contig.fa_viral_59	1	9	3	34	14	44	44	11	134	2	6	2	0	0	0	10	1	13	1	4	4	31	27	19
Ex45-T1-9_contig.fa_viral_60	5	21	9	32	12	35	47	19	182	45	11	18	0	0	0	80	7	49	16	42	67	28	38	8
Ex45-T1-9_contig.fa_viral_61	1	3	3	1	2	4	2	3	79	39	4	4	0	0	0	48	14	41	1	14	18	15	3	2
Ex45-T1-9_contig.fa_viral_62	12	16	15	7	2	17	28	23	80	11	5	6	4	1	1	5	10	8	35	25	19	7	38	16
Ex45-T1-9_contig.fa_viral_63	48	73	51	100	25	134	207	239	362	224	184	165	0	2	1	496	30	175	141	352	565	217	195	106
Ex45-T1-9_contig.fa_viral_64	0	0	0	0	0	6	0	0	75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-9_contig.fa_viral_65	0	0	2	0	0	8	5	0	122	6	6	2	0	0	0	2	0	1	2	4	19	2	0	0
Ex45-T1-9_contig.fa_viral_66	8	8	2	32	9	15	133	108	59	3	4	7	0	0	0	6	1	1	61	93	159	89	111	21
Ex45-T1-9_contig.fa_viral_67	1	16	8	50	20	42	36	31	265	86	33	21	2	0	2	186	25	100	31	35	56	36	25	10
Ex45-T1-9_contig.fa_viral_68	4	26	10	41	2	25	22	18	102	13	1	1	0	0	0	14	8	8	15	12	12	34	26	9
Ex45-T1-9_contig.fa_viral_69	7	17	13	23	7	10	27	36	134	160	50	17	2	1	3	100	12	34	18	29	41	28	47	22
Ex45-T1-9_contig.fa_viral_70	5	14	21	10	3	28	33	15	216	16	4	2	1	3	0	30	14	58	8	7	5	7	29	12
Ex45-T1-9_contig.fa_viral_71	2	6	12	33	6	38	23	47	122	21	4	14	0	0	0	11	7	22	18	22	27	38	24	17
Ex45-T1-9_contig.fa_viral_72	6	22	13	19	5	27	43	37	158	38	41	23	2	2	0	16	10	62	25	65	31	27	109	37
Ex45-T1-9_contig.fa_viral_73	0	0	0	5	0	8	7	0	95	4	15	6	0	0	0	0	0	3	0	1	27	0	0	0
Ex45-T1-9_contig.fa_viral_74	8	27	7	18	7	45	40	40	61	12	12	0	0	0	0	36	1	4	5	10	20	21	51	33
Ex45-T1-9_contig.fa_viral_75	1	0	0	0	0	0	2	1	123	113	25	7	0	0	0	331	0	68	1	10	7	3	2	1
Ex45-T1-9_contig.fa_viral_76	1	6	7	20	0	30	20	11	147	38	26	31	0	0	0	185	42	54	26	31	70	18	19	6
Ex45-T1-9_contig.fa_viral_77	13	4	3	1	11	33	17	5	51	2	3	0	0	3	0	0	2	0	3	5	3	3	9	7
Ex45-T1-9_contig.fa_viral_78	0	1	0	1	0	0	5	1	155	3	0	0	0	0	0	2	1	14	0	0	0	2	0	0
Ex45-T1-9_contig.fa_viral_79	1	1	1	8	1	8	15	7	106	105	29	19	0	0	0	34	2	19	6	9	8	16	10	7
Ex45-T1-9_contig.fa_viral_80	2	5	2	9	0	15	11	1	93	12	4	1	0	0	0	20	4	25	0	3	4	6	1	2
Ex45-T1-9_contig.fa_viral_81	0	1	1	4	0	1	10	7	118	3	0	0	0	0	0	1	0	1	2	5	18	2	2	0
Ex45-T1-9_contig.fa_viral_82	6	7	1	7	11	27	20	32	64	2	1	0	0	0	0	0	0	1	8	3	5	10	16	12
Ex45-T1-9_contig.fa_viral_83	0	10	2	11	1	16	6	2	75	13	2	2	0	0	0	18	4	17	1	5	10	7	2	2
Ex45-T1-9_contig.fa_viral_84	0	5	0	18	2	8	10	6	105	11	0	1	0	0	0	9	0	7	8	2	2	12	22	6
Ex45-T1-9_contig.fa_viral_85	3	5	3	49	16	62	14	6	194	22	7	5	0	0	0	23	4	26	3	9	9	24	19	3
Ex45-T1-9_contig.fa_viral_86	0	8	0	42	12	66	19	1	127	20	5	2	0	0	0	25	2	23	2	2	15	31	25	5
Ex45-T1-9_contig.fa_viral_87	2	5	3	26	8	37	16	7	158	20	7	2	1	0	0	51	13	25	2	1	4	25	19	3
Ex45-T1-9_contig.fa_viral_88	1	2	0	9	1	1	7	4	91	78	12	3	0	0	0	45	1	11	3	6	9	4	5	1
Ex45-T1-9_contig.fa_viral_89	0	1	2	0	0	0	1	2	162	0	0	0	1	1	0	0	0	0	0	0	0	0	2	2
Ex45-T1-9_contig.fa_viral_90	22	21	35	22	8	21	33	40	243	58	87	53	20	22	12	84	51	142	24	21	23	11	71	34
Ex45-T1-9_contig.fa_viral_91	0	0	0	1	0	0	1	1	219	279	37	10	0	0	0	826	3	181	1	1	6	3	4	0
Ex45-T1-9_contig.fa_viral_92	0	2	5	5	2	13	22	7	106	3	7	4	0	0	0	2	0	7	1	10	56	15	4	0
Ex45-T1-9_contig.fa_viral_93	5	6	3	31	9	45	15	10	182	45	19	9	0	0	0	93	27	74	12	31	58	22	19	7
Ex45-T1-9_contig.fa_viral_94	1	7	4	8	1	15	5	1	124	18	8	13	0	0	0	11	2	7	2	39	44	6	5	5
Ex45-T1-9_contig.fa_viral_95	3	3	8	25	13	49	12	10	61	15	10	5	0	0	0	34	4	22	0	3	3	30	23	8
Ex45-T1-9_contig.fa_viral_96	25	49	76	32	6	49	64	79	138	3	9	13	0	0	0	3	1	1	51	56	38	37	77	32
Ex45-T1-9_contig.fa_viral_97	5	5	4	17	1	7	25	18	84	70	28	27	0	2	0	100	8	30	8	21	26	24	14	7
Ex45-T1-9_contig.fa_viral_98	4	12	5	15	4	22	16	5	112	78	27	15	3	2	0	117	15	43	13	13	29	11	16	12
Ex45-T1-9_contig.fa_viral_99	10	16	14	62	13	44	65	54	181	86	36	71	0	0	0	249	37	87	45	57	116	71	51	34
Ex45-T1-9_contig.fa_viral_100	2	2	1	21	7	20	5	7	100	53	6	2	1	29	0	38	10	18	4	9	5	7	8	4
Ex45-T1-9_contig.fa_viral_101	0	2	1	6	2	5	5	2	117	10	4	8	0	0	0	25	1	8	6	7	13	9	8	1
Ex45-T1-9_contig.fa_viral_102	2	18	1	59	4	18	98	68	77	20	4	3	0	0	0	46	2	9	24	52	103	90	65	27
Ex45-T1-9_contig.fa_viral_103	0	0	0	2	0	0	0	0	89	4	11	4	0	0	0	5	0	7	0	0	1	1	0	0
Ex45-T1-9_contig.fa_viral_104	2	11	4	5	5	13	25	26	187	42	135	3	0	0	0	6	0	0	0	15	2	9	9	14
Ex45-T1-9_contig.fa_viral_105	28	117	260	82	17	145	194	220	257	4	4	7	26	12	14	25	8	13	101	121	82	86	209	75
Ex45-T1-9_contig.fa_viral_106	44	107	82	67	52	199	86	129	164	50	37	29	27	23	26	92	34	42	66	107	97	94	161	96
Ex45-T1-9_contig.fa_viral_107	2	1	1	6	0	6	14	3	145	4	13	1	0	0	0	0	0	2	0	13	56	2	1	0
Ex45-T1-9_contig.fa_viral_108	0	1	0	6	2	4	12	6	109	12	9	6	0	0	0	0	0	5	1	11	66	5	2	0
Ex45-T1-9_contig.fa_viral_109	17	6	5	13	0	5	61	10	147	79	34	93	0	0	0	325	648	350	30	12	8	19	83	32
Ex45-T1-9_contig.fa_viral_110	0	0	0	3	0	4	9	2	104	19	8	1	0	0	0	2	0	2	0	7	30	2	0	0
Ex45-T1-9_contig.fa_viral_111	2	7	3	21	10	23	24	11	124	12	3	4	0	0	0	13	13	12	12	17	38	29	16	7
Ex45-T1-9_contig.fa_viral_112	21	63	65	32	11	44	82	132	82	11	11	10	3	3	0	10	7	8	82	89	84	50	86	61
Ex45-T1-9_contig.fa_viral_113	2	9	10	44	12	61	38	30	124	22	5	5	0	0	0	43	4	32	2	13	17	22	19	8
Ex45-T1-9_contig.fa_viral_114	0	3	3	3	1	5	15	13	261	259	75	26	0	0	0	818	3	218	4	28	35	12	5	2
Ex45-T1-9_contig.fa_viral_115	40	32	37	35	9	31	55	38	53	53	38	80	1	4	0	31	46	20	76	36	16	29	70	55
Ex45-T1-9_contig.fa_viral_116	0	1	5	30	4	16	10	6	145	22	6	9	0	0	0	17	6	31	2	19	22	6	7	5
Ex45-T1-9_contig.fa_viral_117	0	0	0	0	0	0	0	0	107	79	16	1	0	0	0	236	0	55	0	0	0	0	2	0
Ex45-T1-9_contig.fa_viral_118	0	2	2	3	1	0	3	2	90	120	11	8	0	0	0	20	0	7	0	6	11	2	8	3
Ex45-T1-9_contig.fa_viral_119	0	3	2	3	1	13	20	2	138	14	14	4	0	0	0	10	0	4	1	25	67	7	4	4
Ex45-T1-9_contig.fa_viral_120	26	10	15	29	1	30	13	14	84	11	13	6	3	0	2	10	20	11	18	12	10	13	39	15
Ex45-T1-9_contig.fa_viral_121	0	2	2	5	0	1	8	9	97	103	24	12	0	0	0	80	1	25	2	9	18	13	8	5
Ex45-T1-9_contig.fa_viral_122	0	0	0	0	0	0	1	0	97	22	18	14	0	0	0	60	1	17	0	0	0	1	0	0
Ex45-T1-9_contig.fa_viral_123	3	2	1	25	7	16	9	5	136	10	2	1	0	0	0	8	0	9	1	2	0	4	9	0
Ex45-T1-9_contig.fa_viral_124	11	12	3	26	2	11	14	7	101	7	0	1	0	0	0	15	1	8	14	5	5	11	13	6
Ex45-T1-9_contig.fa_viral_125	2	2	6	15	3	27	23	21	72	59	9	9	0	0	0	65	19	57	8	8	10	13	13	9
Ex45-T1-9_contig.fa_viral_126	1	4	6	27	3	10	8	19	77	10	4	2	0	0	0	8	5	2	3	19	38	7	6	5
Ex45-T1-9_contig.fa_viral_127	1	5	1	0	6	4	2	11	60	8	25	0	0	0	0	0	0	0	0	3	1	1	1	2
Ex45-T1-9_contig.fa_viral_128	0	1	0	0	0	0	3	0	108	14	8	12	0	0	0	17	1	23	0	3	8	1	2	0
Ex45-T1-9_contig.fa_viral_129	0	0	2	33	1	12	16	13	99	17	2	0	0	0	0	38	6	10	3	4	0	14	22	5
Ex45-T1-9_contig.fa_viral_130	0	2	0	12	5	7	4	1	109	83	38	21	0	0	0	282	0	43	3	3	6	2	1	4
Ex45-T1-9_contig.fa_viral_131	0	0	0	0	0	0	1	0	120	109	26	3	0	0	0	535	2	112	1	1	0	0	3	0
Ex45-T1-9_contig.fa_viral_132	51	188	372	150	98	481	140	173	379	132	14	3	54	65	45	28	4	48	83	85	37	120	165	158
Ex45-T1-9_contig.fa_viral_133	1	4	2	4	0	5	2	7	42	37	28	5	3	0	1	25	3	5	5	6	9	4	1	3
HP-T1-3_contig.fa_provirus_1	0	0	1	0	0	0	0	1	21	138	22	3	0	0	0	520	3	109	0	0	0	0	0	0
HP-T1-3_contig.fa_provirus_2	3	0	3	2	3	3	2	1	3	50	52	65	0	1	1	213	15	17	2	5	2	0	3	3
HP-T1-3_contig.fa_provirus_3	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_provirus_4	0	1	0	0	0	0	0	0	0	700	5	1	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_provirus_5	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_1	9	0	0	1	0	1	0	0	3	157	108	196	0	0	0	38	139	127	0	3	0	1	12	2
HP-T1-3_contig.fa_viral_2	2	4	2	10	4	9	14	9	112	118	19	60	0	1	0	189	29	64	8	13	18	5	8	4
HP-T1-3_contig.fa_viral_3	3	1	3	14	14	33	17	11	50	69	8	1	0	0	0	114	22	108	3	2	4	19	18	5
HP-T1-3_contig.fa_viral_4	0	0	0	0	0	0	0	0	0	91	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_5	3	6	4	9	1	3	13	24	114	130	19	14	0	0	0	66	2	18	15	24	41	13	13	4
HP-T1-3_contig.fa_viral_6	206	159	101	154	57	140	78	71	56	721	179	254	48	65	39	280	470	269	136	64	63	69	313	161
HP-T1-3_contig.fa_viral_7	0	0	0	0	0	0	0	0	2	140	4	1	0	0	0	56	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_8	0	0	0	0	0	0	0	0	0	430	4	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_9	1	2	0	0	0	2	1	2	2	71	39	22	0	0	0	75	60	24	8	2	2	0	1	0
HP-T1-3_contig.fa_viral_10	5	15	6	17	1	10	13	23	76	94	33	55	0	0	0	253	31	121	24	23	45	21	9	7
HP-T1-9_contig.fa_viral_268	2	0	0	1	0	0	0	1	2	128	79	228	0	1	0	52	205	138	0	1	3	1	2	3
HP-T1-9_contig.fa_viral_269	8	0	1	1	3	0	0	1	1	11	34	114	0	1	0	83	8	5	1	2	3	1	1	0
HP-T1-9_contig.fa_viral_270	3	0	0	0	1	0	0	1	0	4	11	84	0	0	0	13	3	3	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_271	62	49	42	41	24	52	41	24	38	98	164	246	22	21	17	180	135	101	52	23	30	30	137	76
HP-T1-9_contig.fa_viral_272	0	0	0	0	0	0	0	0	0	0	0	229	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_273	0	1	0	0	0	0	0	0	0	0	43	311	0	0	0	0	0	0	1	0	0	0	0	0
UAB-T1-6_contig.fa_viral_81	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	0
UAB-T1-6_contig.fa_viral_82	2	0	0	2	3	2	4	3	0	2	8	10	0	1	0	6	7	4	3	2	1	0	141	20
UAB-T1-6_contig.fa_viral_83	76	153	50	36	0	3	32	29	0	2	0	0	0	0	0	1	0	0	9	4	2	157	142	173
UAB-T1-6_contig.fa_viral_84	3	3	0	0	0	1	0	0	0	2	1	2	0	2	0	2	6	2	0	0	0	5	123	2
UAB-T1-6_contig.fa_viral_86	37	131	231	64	37	86	149	136	1	0	1	0	1	4	1	2	2	3	72	67	21	92	206	146
UAB-T1-6_contig.fa_viral_87	9	25	23	8	3	9	27	24	0	0	0	0	0	0	0	0	0	0	7	19	5	22	72	37
UAB-T1-6_contig.fa_viral_88	146	85	38	84	41	92	65	44	50	84	62	105	29	23	15	98	153	111	70	27	23	47	251	100
UAB-T1-6_contig.fa_viral_89	2	0	0	0	3	0	1	0	0	0	2	6	0	0	0	0	8	2	2	0	0	2	209	7
UAB-T1-6_contig.fa_viral_90	0	1	0	1	1	1	0	0	1	1	0	0	2	0	0	0	0	0	0	0	0	0	180	1
UAB-T1-6_contig.fa_viral_91	87	7	3	10	2	10	15	4	8	4	6	11	0	0	0	8	28	11	4	1	3	3	60	31
UAB-T1-6_contig.fa_viral_92	31	40	8	6	14	11	12	5	7	5	2	2	84	52	41	28	33	9	5	2	2	17	333	6
UAB-T1-6_contig.fa_viral_93	0	0	0	27	0	0	5	14	21	0	91	0	0	0	0	0	0	0	360	53	94	0	1380	2
UAB-T1-6_contig.fa_viral_94	0	4	5	7	3	6	8	4	3	13	10	5	8	5	13	19	2	7	7	9	2	2	79	8
UAB-T1-6_contig.fa_viral_95	9	21	2	6	9	0	2	0	2	0	0	0	6	1	2	0	0	1	0	0	0	2	1709	35
UAB-T1-6_contig.fa_viral_96	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	68	22
UAB-T1-6_contig.fa_viral_97	52	20	21	69	6	18	35	19	18	25	21	60	11	17	0	33	69	42	31	11	9	15	157	53
UAB-T1-6_contig.fa_viral_98	49	50	6	35	9	17	1	0	0	0	0	0	0	17	0	0	0	0	1	1	0	0	70	41
UAB-T1-6_contig.fa_viral_99	3	17	9	53	8	11	102	75	30	10	5	7	0	0	0	17	0	10	34	85	132	66	87	24
UAB-T1-6_contig.fa_viral_100	224	183	105	164	74	140	144	96	105	141	143	272	64	67	61	269	595	328	165	80	81	110	529	224
UAB-T1-6_contig.fa_viral_101	15	19	9	23	10	8	3	4	1	3	14	12	1	3	1	7	3	0	24	3	4	8	78	27
UAB-T1-6_contig.fa_viral_103	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	0
UAB-T1-6_contig.fa_viral_104	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	128	0
UAB-T1-6_contig.fa_viral_105	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	205	0
UAB-T1-6_contig.fa_viral_106	9	17	1	12	0	1	4	5	0	0	0	0	1	3	0	0	0	0	0	1	0	5	162	94
UAB-T1-6_contig.fa_viral_107	26	39	31	43	16	44	69	52	77	11	12	34	15	12	3	40	44	46	35	146	133	66	117	73
UAB-T1-6_contig.fa_viral_108	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	0
UAB-T1-6_contig.fa_viral_109	0	0	0	1	2	2	0	2	0	1	1	0	0	0	0	1	2	1	0	0	0	0	215	4
UAB-T1-6_contig.fa_viral_110	12	18	15	66	2	33	179	132	72	43	10	19	0	0	0	78	2	27	57	130	212	123	154	38
UAB-T1-6_contig.fa_viral_111	11	85	113	38	11	38	44	65	0	0	0	0	0	0	0	0	0	0	26	49	7	55	116	98
UAB-T1-6_contig.fa_viral_112	9	24	12	50	14	28	253	173	136	75	37	31	0	1	0	28	6	22	55	120	258	189	178	41
UAB-T1-6_contig.fa_viral_113	32	2	6	6	1	8	7	10	6	7	38	50	0	0	0	49	85	27	35	6	13	3	98	33
UAB-T1-6_contig.fa_viral_114	0	0	0	0	0	0	2	1	0	0	12	0	0	0	0	0	0	0	9	4	24	0	477	0
UAB-T1-6_contig.fa_viral_115	0	0	0	0	0	1	1	1	0	1	2	1	0	0	0	0	0	0	0	0	1	0	9128	0
UAB-T1-6_contig.fa_viral_116	4	10	15	12	1	5	17	22	13	2	0	0	1	0	0	6	1	0	28	41	14	10	101	25
UAB-T1-6_contig.fa_viral_117	91	63	44	40	7	64	83	80	20	29	14	32	3	2	0	37	43	28	146	104	73	40	183	70
UAB-T1-6_contig.fa_viral_118	116	31	4	48	5	44	32	16	14	18	4	13	0	0	0	20	52	33	25	12	11	21	126	58
UAB-T1-6_contig.fa_viral_119	11	15	5	6	0	1	22	15	2	7	3	5	0	0	0	10	12	4	37	19	14	14	71	16
UAB-T1-6_contig.fa_viral_120	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	114	0
UAB-T1-6_contig.fa_viral_121	4	18	2	9	2	6	6	2	2	2	1	3	0	0	0	2	2	3	1	1	1	4	127	86
UAB-T1-6_contig.fa_viral_122	17	11	3	16	1	12	18	17	2	0	5	0	1	7	0	3	1	0	8	3	9	5	217	85
UAB-T1-6_contig.fa_viral_123	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	0
UAB-T1-6_contig.fa_viral_124	14	25	2	14	5	2	15	18	6	4	4	2	3	4	1	4	4	8	7	11	5	7	194	53
UAB-T1-6_contig.fa_viral_125	9	5	0	3	0	4	0	10	5	0	1	0	0	2	0	11	3	2	15	2	13	29	76	21
UAB-T1-6_contig.fa_viral_126	2	8	3	3	1	0	5	15	0	0	0	0	9	2	0	0	0	0	3	0	1	0	111	9
UAB-T1-6_contig.fa_viral_127	40	28	7	21	6	15	19	14	0	8	8	11	7	3	6	9	21	10	16	3	5	25	169	140
UAB-T1-6_contig.fa_viral_128	144	435	688	239	89	211	236	346	29	16	9	11	3	3	2	120	86	68	166	256	78	257	651	497
UAB-T1-6_contig.fa_viral_129	41	21	4	35	0	2	15	9	3	0	0	0	0	0	0	2	2	6	32	16	17	21	88	50
UAB-T1-6_contig.fa_viral_130	32	16	3	22	1	8	10	2	6	2	1	6	0	0	0	3	8	6	11	4	0	8	71	25
UAB-T1-6_contig.fa_viral_131	8	38	6	19	2	3	21	11	0	0	0	1	0	0	0	0	1	1	2	0	4	21	89	50
UAB-T1-6_contig.fa_viral_132	81	54	50	68	1	27	119	93	31	22	16	64	0	0	0	178	249	182	57	53	30	41	165	58
UAB-T1-6_contig.fa_viral_133	200	65	8	82	12	44	75	38	43	40	17	20	3	3	0	26	57	28	55	21	22	44	241	94
UAB-T1-6_contig.fa_viral_134	61	42	25	26	23	27	31	20	15	40	28	52	37	15	6	45	134	78	36	20	6	25	173	52
UAB-T1-6_contig.fa_viral_135	38	53	78	36	12	28	47	65	4	1	0	2	0	0	0	2	3	1	53	71	28	56	118	77
RP-T1-3_contig.fa_viral_761	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	149	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_762	2	5	0	2	1	3	0	5	12	7	9	5	4	0	3	99	9	23	6	6	8	4	9	4
RP-T1-3_contig.fa_viral_763	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	171	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_764	0	2	1	0	0	0	0	0	0	1	7	1	0	0	0	103	2	0	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_765	0	2	3	4	1	2	4	11	3	5	0	1	0	0	0	104	0	7	24	9	8	3	4	3
RP-T1-3_contig.fa_viral_766	2	2	0	2	0	0	1	2	2	0	0	0	0	0	0	217	23	17	2	1	1	2	1	0
RP-T1-3_contig.fa_viral_767	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	129	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_768	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	97	10	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_769	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	695	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_770	0	3	2	3	0	5	6	5	16	94	11	13	0	0	0	201	38	160	6	14	15	3	1	0
RP-T1-3_contig.fa_viral_771	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	100	1	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_772	0	4	2	0	0	1	0	1	1	36	7	4	0	1	0	218	5	3	5	3	2	0	4	2
RP-T1-3_contig.fa_viral_773	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	51	1	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_774	0	0	0	0	0	0	0	0	7	54	2	6	0	0	0	205	7	102	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_775	5	10	8	15	5	16	10	7	11	12	14	20	5	4	4	112	13	21	4	11	3	6	17	14
RP-T1-3_contig.fa_viral_777	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	124	1	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_778	1	3	6	1	0	2	0	8	5	7	7	1	0	3	1	252	15	53	4	3	3	1	12	3
RP-T1-3_contig.fa_viral_779	2	4	0	1	0	4	1	0	1	1	1	1	2	1	4	249	3	2	2	2	0	3	3	5
RP-T1-3_contig.fa_viral_780	92	106	78	98	83	129	74	95	69	124	188	187	71	81	68	627	181	150	111	123	120	90	191	101
RP-T1-3_contig.fa_viral_781	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	115	6	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_782	0	0	0	0	0	0	0	0	0	8	27	41	0	0	0	106	4	12	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_783	3	1	0	1	0	0	2	0	4	33	27	40	0	0	0	85	3	11	1	4	16	3	0	1
RP-T1-3_contig.fa_viral_784	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	18	15	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_785	0	0	1	1	0	0	2	0	9	5	0	1	0	0	0	179	9	4	2	3	4	1	0	0
RP-T1-3_contig.fa_viral_786	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	331	0	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_787	0	0	0	1	0	1	2	0	12	27	5	9	0	0	0	138	13	44	1	2	0	0	1	0
RP-T1-3_contig.fa_viral_788	0	0	0	0	0	1	1	2	0	12	3	1	0	1	0	169	50	106	4	2	0	0	1	2
RP-T1-3_contig.fa_viral_789	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	168	40	17	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_790	0	1	2	2	1	2	2	0	0	1	3	2	0	0	0	85	5	4	3	3	0	1	1	2
RP-T1-3_contig.fa_viral_791	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1044	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_792	1	1	3	6	0	6	26	8	45	83	48	21	1	0	0	203	6	76	12	18	36	12	20	6
RP-T1-3_contig.fa_viral_793	9	11	5	15	5	7	18	15	48	34	13	23	0	0	0	285	18	48	27	42	60	24	18	8
RP-T1-3_contig.fa_viral_794	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	91	2	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_795	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	171	55	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_796	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	138	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_797	4	3	7	4	2	5	4	4	13	167	84	36	1	0	0	668	52	66	8	9	12	4	1	4
RP-T1-3_contig.fa_viral_798	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	139	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_799	0	0	0	0	0	0	1	0	0	23	27	29	0	0	0	91	0	13	3	0	5	0	0	1
RP-T1-3_contig.fa_viral_800	6	0	0	1	0	2	0	0	1	14	40	35	1	0	1	74	11	10	2	3	4	0	4	0
RP-T1-3_contig.fa_viral_801	0	0	1	2	1	0	2	3	22	36	13	16	0	0	0	158	7	66	6	9	22	1	1	0
RP-T1-3_contig.fa_viral_802	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	104	37	29	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_803	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	623	66	92	0	0	0	1	1	0
RP-T1-3_contig.fa_viral_804	0	1	0	0	0	0	1	0	0	6	5	1	0	0	0	64	0	2	1	0	2	0	0	1
RP-T1-3_contig.fa_viral_805	0	0	0	0	1	4	2	0	1	1	10	10	0	0	0	115	0	3	0	2	1	2	2	0
RP-T1-3_contig.fa_viral_806	0	1	0	6	1	5	11	5	23	72	5	16	0	0	0	228	4	70	4	9	13	5	6	1
RP-T1-3_contig.fa_viral_807	1	1	1	1	1	3	2	1	1	5	5	0	2	1	2	68	1	1	0	0	2	0	1	1
RP-T1-3_contig.fa_viral_808	0	0	0	0	0	0	0	0	0	7	4	37	0	0	0	68	227	86	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_58	46	24	13	23	19	43	8	18	16	32	48	49	21	16	27	185	250	169	31	33	19	26	65	41
RP-T1-9_contig.fa_viral_60	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	30	146	87	0	0	0	0	0	1
RP-T1-9_contig.fa_viral_61	162	85	42	65	28	53	35	35	24	85	93	142	42	40	18	165	397	248	60	34	25	21	159	91
RP-T1-9_contig.fa_viral_62	0	3	0	3	3	2	14	4	23	49	17	11	0	0	0	216	5	106	5	10	32	6	7	9
RP-T1-9_contig.fa_viral_63	0	0	0	0	0	1	3	1	17	58	4	14	0	0	0	246	2	88	0	4	8	6	0	2
RP-T1-9_contig.fa_viral_64	3	2	2	0	0	2	1	2	0	1	3	1	3	0	1	39	22	97	0	1	2	1	4	1
RP-T1-9_contig.fa_viral_65	25	27	7	12	8	11	5	5	3	13	44	109	2	3	5	68	277	124	32	9	7	9	38	14
RP-T1-9_contig.fa_viral_66	307	335	171	279	48	140	459	325	201	205	127	277	34	22	24	760	1308	695	299	225	145	226	918	257
RP-T1-9_contig.fa_viral_67	33	22	24	34	9	19	50	42	23	35	22	75	3	4	1	179	307	172	36	26	14	21	83	48
RP-T1-9_contig.fa_viral_69	1	1	1	0	2	1	0	1	17	76	12	7	0	0	0	246	6	87	1	3	2	1	1	1
RP-T1-9_contig.fa_viral_70	2	2	1	8	3	4	0	3	1	3	7	19	4	3	3	7	35	63	7	3	0	6	17	7
RP-T1-9_contig.fa_viral_71	70	58	49	54	7	38	64	58	40	68	55	140	5	1	1	162	284	181	108	79	57	44	144	55
RP-T1-9_contig.fa_viral_73	5	0	0	0	0	0	0	0	0	4	4	17	0	0	0	24	9	204	22	0	1	1	0	0
RP-T1-9_contig.fa_viral_74	60	49	21	42	4	27	107	61	64	30	32	92	4	2	1	166	344	231	54	41	18	24	145	49
RP-T1-9_contig.fa_viral_75	57	34	15	48	11	33	51	33	70	47	51	98	8	8	4	172	367	222	49	24	34	32	149	45
RP-T1-9_contig.fa_viral_76	2	1	1	0	0	1	0	1	0	3	8	11	0	1	0	15	83	49	0	2	1	0	0	1
RP-T1-9_contig.fa_viral_77	22	57	40	82	19	97	131	167	257	277	175	175	6	6	4	602	100	272	138	272	405	142	128	61
RP-T1-9_contig.fa_viral_78	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	85	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_79	0	0	0	1	0	0	4	1	20	71	9	17	0	0	0	300	10	89	2	3	5	3	3	2
RP-T1-9_contig.fa_viral_80	1	5	4	19	1	9	54	39	41	74	19	20	0	0	0	226	10	87	14	36	60	31	52	14
RP-T1-9_contig.fa_viral_81	0	0	1	2	1	10	5	2	30	40	9	1	0	0	0	93	13	92	0	0	0	6	7	2
RP-T1-9_contig.fa_viral_82	2	0	0	0	0	0	0	0	0	3	29	37	0	0	0	15	200	116	0	0	0	0	2	0
RP-T1-9_contig.fa_viral_83	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	12	1	127	0	2	3	0	0	1
RP-T1-9_contig.fa_viral_84	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	50	132	98	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_86	4	0	0	0	0	0	1	0	2	0	0	0	0	0	0	12	8	111	0	2	1	1	1	0
RP-T1-9_contig.fa_viral_87	0	6	0	3	1	0	4	1	26	41	9	8	0	0	0	79	15	71	7	7	4	1	2	0
RP-T1-9_contig.fa_viral_88	2	1	0	1	0	0	0	0	0	1	5	9	1	0	0	53	183	99	1	0	2	0	3	0
RP-T1-9_contig.fa_viral_90	55	9	2	2	4	3	6	0	4	17	56	113	2	2	1	41	239	202	4	3	2	1	29	26
RP-T1-9_contig.fa_viral_91	3	10	1	4	1	3	2	1	2	7	3	6	5	4	5	22	119	167	4	1	2	0	6	1
RP-T1-9_contig.fa_viral_92	28	26	18	12	7	12	5	3	9	10	15	3	20	8	8	28	56	101	11	8	4	4	12	16
RP-T1-9_contig.fa_viral_93	5	2	0	10	0	2	2	1	1	8	14	30	0	3	3	603	117	135	6	9	2	4	7	7
RP-T1-9_contig.fa_viral_94	7	7	3	28	12	21	13	15	44	34	18	18	2	3	5	432	91	121	16	12	30	19	22	19
RP-T1-9_contig.fa_viral_95	47	59	53	40	48	63	35	51	52	101	53	35	52	38	71	105	52	81	57	36	25	44	72	54
RP-T1-9_contig.fa_viral_96	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_98	866	533	306	383	246	430	289	301	335	956	909	893	265	207	193	1688	1305	939	485	313	342	292	911	515
RP-T1-9_contig.fa_viral_99	9	0	3	3	3	0	8	5	4	11	0	5	0	0	0	32	76	43	12	0	0	3	25	3
RP-T1-9_contig.fa_viral_100	7	2	1	2	0	1	0	1	0	2	8	6	0	0	0	8	45	146	0	0	0	0	5	0
RP-T1-9_contig.fa_viral_101	7	0	0	0	0	0	0	0	0	7	9	8	0	0	1	5	131	82	1	1	0	1	8	2
RP-T1-9_contig.fa_viral_102	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	5	87	1	1	0	1	0	1
RP-T1-9_contig.fa_viral_103	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	151	122	0	0	0	0	0	1
RP-T1-9_contig.fa_viral_105	25	5	3	8	0	5	4	1	5	22	22	59	0	2	0	90	444	201	6	0	2	2	18	12
RP-T1-9_contig.fa_viral_106	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	61	167	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_108	1	0	0	0	0	0	1	0	0	0	0	2	0	1	0	3	147	97	1	0	0	0	0	0
RP-T1-9_contig.fa_viral_109	142	164	123	143	85	154	124	161	132	221	189	194	87	53	53	764	313	331	217	186	208	151	238	140
RP-T1-9_contig.fa_viral_110	3	14	6	25	2	27	29	41	43	30	4	3	0	0	0	277	76	101	56	59	97	49	44	18
RP-T1-9_contig.fa_viral_111	1	1	0	0	0	0	2	0	4	0	6	42	0	0	0	24	115	182	0	3	2	0	2	1
RP-T1-9_contig.fa_viral_112	10	11	5	14	0	2	18	8	6	12	16	50	0	0	0	56	123	80	15	13	6	5	25	5
RP-T1-9_contig.fa_viral_113	0	0	0	4	0	0	3	3	8	106	13	0	0	0	0	163	24	143	0	1	0	3	2	0
RP-T1-9_contig.fa_viral_114	2	0	0	2	0	0	0	0	0	3	2	1	0	0	0	36	10	164	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_115	0	2	2	6	2	6	5	3	22	34	2	4	0	0	0	85	14	93	0	1	3	2	3	1
RP-T1-9_contig.fa_viral_116	0	2	2	5	0	3	5	3	11	102	21	8	0	0	0	186	33	146	2	17	24	4	3	0
RP-T1-9_contig.fa_viral_118	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	22	105	190	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_119	5	24	26	43	10	30	101	59	64	139	48	50	14	10	8	345	31	121	49	42	131	80	93	35
RP-T1-9_contig.fa_viral_120	6	5	1	11	3	21	3	3	36	53	15	6	0	0	0	116	12	126	10	0	0	5	4	2
RP-T1-9_contig.fa_viral_121	26	23	9	10	6	15	22	14	8	31	50	177	6	6	13	99	467	324	51	19	13	17	66	33
RP-T1-9_contig.fa_viral_122	80	71	50	55	26	38	106	53	44	101	70	171	22	20	16	247	529	343	89	33	36	52	155	69
RP-T1-9_contig.fa_viral_123	1	2	2	0	0	6	2	6	40	52	9	9	2	0	2	132	57	191	10	13	17	4	3	2
RP-T1-9_contig.fa_viral_124	1	1	1	2	0	1	0	0	18	18	0	1	0	0	0	19	5	68	1	0	1	2	2	2
RP-T1-9_contig.fa_viral_125	1	0	0	0	0	0	0	0	0	0	1	1	0	2	0	6	40	83	0	1	0	0	0	1
RP-T1-9_contig.fa_viral_126	149	89	24	68	30	42	41	25	19	116	78	113	21	40	7	99	627	607	32	16	17	52	164	108
RP-T1-9_contig.fa_viral_127	0	2	0	2	0	1	7	5	6	9	7	4	0	0	0	44	24	64	18	12	17	1	2	2
RP-T1-9_contig.fa_viral_129	0	1	1	0	1	1	2	4	18	84	11	36	0	0	0	223	14	126	6	8	14	2	1	3
RP-T1-9_contig.fa_viral_130	33	41	26	44	29	70	35	36	19	18	5	8	10	41	10	80	136	83	28	15	13	10	99	53
RP-T1-9_contig.fa_viral_131	6	9	0	25	3	11	59	32	51	49	17	23	0	0	0	347	14	150	19	59	96	37	27	10
RP-T1-9_contig.fa_viral_132	2	2	0	1	0	0	0	0	0	16	7	11	0	0	0	10	49	86	0	0	0	0	2	0
HP-T1-6_contig.fa_viral_278	0	1	0	0	0	0	0	0	3	175	249	198	0	0	0	737	15	53	0	3	2	0	1	1
HP-T1-6_contig.fa_viral_279	0	0	0	0	0	0	0	0	8	113	205	13	0	0	0	140	1	7	0	2	0	0	0	0
HP-T1-6_contig.fa_viral_280	0	0	0	1	0	3	10	5	16	19	68	40	0	0	0	26	0	4	2	4	23	2	2	0
HP-T1-6_contig.fa_viral_281	0	0	0	0	0	0	0	0	0	0	125	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_282	0	0	0	0	0	0	0	0	0	0	91	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_283	1	0	2	0	1	0	0	0	1	26	117	164	0	1	0	54	12	11	6	4	7	0	8	1
HP-T1-6_contig.fa_viral_284	64	70	46	74	39	44	48	42	23	74	104	60	47	42	42	101	83	45	69	30	21	43	105	70
HP-T1-6_contig.fa_viral_286	0	0	0	0	0	0	0	0	0	143	84	0	0	0	0	24	1	2	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_287	1	2	0	9	4	5	10	10	1	77	124	114	0	0	1	68	1	15	32	13	12	8	9	4
HP-T1-6_contig.fa_viral_288	6	9	11	5	5	8	10	16	16	41	588	27	5	2	5	221	15	19	7	8	32	13	15	10
HP-T1-6_contig.fa_viral_289	0	0	0	0	0	0	0	0	0	0	168	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_290	4	4	5	4	2	2	22	12	65	72	89	24	0	0	0	61	3	30	4	29	41	19	9	8
HP-T1-6_contig.fa_viral_291	0	0	0	0	0	0	0	0	0	0	136	49	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_292	0	0	0	0	0	0	0	0	0	0	143	0	0	0	0	3	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_293	0	0	0	0	0	0	0	0	0	0	284	1	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_294	0	0	0	0	0	0	0	0	0	0	472	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_295	0	0	0	0	0	0	0	0	0	0	289	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_296	0	0	0	0	0	0	0	0	0	0	1191	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_297	0	0	0	0	0	0	0	0	0	0	107	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_298	0	0	0	0	0	0	0	0	0	0	74	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_299	0	0	0	1	0	0	0	0	1	7	312	806	0	0	0	3	0	0	0	0	1	0	1	0
HP-T1-6_contig.fa_viral_300	0	0	0	0	0	0	0	0	0	0	202	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_301	0	0	0	0	0	0	0	0	0	0	651	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_302	0	0	0	0	0	0	0	0	0	0	69	191	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_provirus_1	1	7	5	10	1	9	5	11	15	115	71	144	0	0	0	405	71	43	19	25	51	13	16	5
HP-T1-9_contig.fa_provirus_2	0	0	0	2	0	2	1	0	0	23	56	300	0	0	0	6	2	2	0	1	0	0	2	0
HP-T1-9_contig.fa_provirus_3	0	0	0	0	0	0	0	0	0	8	54	180	1	0	0	4	5	9	0	0	0	0	1	0
HP-T1-9_contig.fa_provirus_4	0	0	0	0	0	1	0	0	5	26	42	53	0	0	0	57	0	9	1	0	0	0	0	0
HP-T1-9_contig.fa_provirus_5	0	0	0	0	0	0	0	0	0	1	0	211	0	0	0	0	0	2	0	0	0	0	0	0
HP-T1-9_contig.fa_provirus_6	0	0	0	0	0	0	0	0	0	18	11	25	0	0	0	115	4	3	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_1	0	0	0	0	0	0	0	0	0	0	0	185	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_3	1	0	2	2	0	4	0	1	2	16	603	1906	0	0	0	27	1	8	5	10	11	2	1	3
HP-T1-9_contig.fa_viral_4	0	0	0	0	0	0	0	0	0	0	0	126	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_5	30	13	15	9	1	10	8	13	13	30	53	73	4	1	3	11	21	16	19	11	6	5	29	21
HP-T1-9_contig.fa_viral_6	0	0	0	0	0	1	0	0	0	16	16	67	0	0	0	1	1	1	0	0	0	1	0	1
HP-T1-6_contig.fa_viral_31	0	0	0	0	0	2	1	1	0	0	124	3	0	1	3	0	4	1	0	1	0	0	1	0
HP-T1-6_contig.fa_viral_32	0	0	0	0	0	0	0	0	0	0	230	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_33	82	68	35	57	22	35	61	36	32	41	96	132	34	29	16	109	272	139	67	34	33	30	181	70
HP-T1-6_contig.fa_viral_34	0	0	0	0	0	0	0	0	0	0	461	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_35	0	0	0	0	0	0	0	0	0	0	165	8	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_37	0	0	0	0	0	0	0	0	0	0	31638	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_38	0	0	0	0	0	0	0	0	0	0	120	121	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_39	0	0	0	0	0	0	0	0	0	0	967	670	0	0	0	5	2	1	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_40	0	0	0	0	0	0	0	0	0	0	965	6	0	0	0	0	0	0	1	1	0	0	0	0
HP-T1-6_contig.fa_viral_41	0	1	0	0	0	1	0	1	1	1	137	5	0	0	0	9	2	1	1	1	1	4	7	0
HP-T1-6_contig.fa_viral_42	1	1	0	0	2	0	0	0	0	3	4272	2	0	0	0	4	4	0	4	0	1	0	1	2
HP-T1-6_contig.fa_viral_43	0	0	0	0	0	0	0	0	0	0	122	136	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_44	0	0	0	0	0	0	0	0	0	0	79	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_45	0	0	0	0	0	0	0	0	0	0	117	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_46	0	3	0	2	0	0	0	0	0	0	34305	95	0	0	0	0	0	0	141	108	74	0	0	81
HP-T1-6_contig.fa_viral_47	0	0	0	0	0	0	0	0	0	0	2661	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_48	1	0	1	0	0	1	1	3	1	1	423	61	0	0	0	2	0	3	0	0	0	1	0	1
HP-T1-6_contig.fa_viral_49	0	0	0	0	0	2	1	0	0	0	80	0	0	0	0	1	0	2	0	0	2	0	1	0
HP-T1-6_contig.fa_viral_50	11	7	12	10	5	6	14	6	4	9	122	33	6	4	4	16	49	38	20	16	13	7	32	12
HP-T1-6_contig.fa_viral_51	0	0	0	1	0	0	2	0	15	64	131	6	0	0	0	103	0	7	0	0	1	0	1	0
HP-T1-6_contig.fa_viral_52	0	0	0	0	0	0	0	0	0	0	190	0	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_53	8	18	18	5	10	18	12	8	11	7	1279	176	7	6	17	40	19	8	7	14	11	12	24	15
HP-T1-6_contig.fa_viral_54	195	158	77	111	34	94	92	96	57	165	199	352	85	58	42	281	387	196	110	68	37	87	420	172
HP-T1-6_contig.fa_viral_55	0	0	0	0	0	0	0	0	0	0	207	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_56	0	0	0	0	0	0	0	0	0	0	58	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_57	0	0	0	0	0	0	0	0	0	0	73	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_59	0	0	0	0	0	0	0	0	1	12	96	14	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_60	0	3	0	1	1	3	1	3	1	3	824	2056	2	2	1	8	1	4	6	6	5	2	5	3
HP-T1-6_contig.fa_viral_61	0	0	0	0	0	0	0	0	0	0	222	1	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_63	7	8	3	3	3	5	1	1	4	6	195	5	1	7	6	3	9	5	7	3	1	2	8	8
HP-T1-6_contig.fa_viral_64	2	2	1	1	2	8	5	1	2	3	278	2	0	1	1	4	5	6	4	4	3	2	2	2
HP-T1-6_contig.fa_viral_65	54	37	31	54	16	26	32	36	29	59	137	215	53	36	42	85	179	93	55	31	18	22	136	56
HP-T1-6_contig.fa_viral_66	0	0	0	0	0	0	0	0	0	0	104	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_67	0	0	0	0	0	0	0	0	0	0	104	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_68	0	0	0	0	0	0	0	0	0	53	89	76	0	0	0	251	2	19	0	0	0	1	0	0
HP-T1-6_contig.fa_viral_69	0	0	0	0	0	0	0	0	0	0	91	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_70	0	0	0	1	0	0	0	0	0	0	144	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_71	0	0	0	0	0	0	0	0	0	0	88	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_72	0	0	0	0	0	0	0	0	0	0	113	34	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_73	4	0	1	0	0	5	5	10	8	151	172	216	0	0	0	700	40	68	8	11	24	5	6	4
HP-T1-6_contig.fa_viral_74	0	0	0	0	0	0	0	0	0	0	267	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_75	6	22	16	12	8	23	12	22	14	23	83	3	5	4	3	25	4	9	33	10	17	20	9	14
RC-T1-9_contig.fa_viral_2	0	2	0	6	0	8	0	2	1	1	2	1	92	89	84	4	3	0	4	5	4	2	1	0
RC-T1-9_contig.fa_viral_3	0	0	2	1	0	0	0	0	0	0	0	0	1	0	234	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_4	3	4	6	3	5	6	4	8	3	0	7	8	5	16	127	1	3	3	9	16	15	8	6	1
RC-T1-9_contig.fa_viral_5	0	0	1	0	0	0	0	0	0	1	0	0	0	2	98	0	0	0	0	0	0	1	0	0
RC-T1-9_contig.fa_viral_6	0	2	0	0	0	0	0	0	4	0	0	0	0	0	278	0	0	0	0	0	0	0	0	1
RC-T1-9_contig.fa_viral_7	0	0	0	1	1	0	0	1	0	0	0	0	0	2	463	0	0	0	0	0	0	0	1	0
RC-T1-9_contig.fa_viral_8	41	111	101	80	8	51	58	75	24	8	2	6	117	157	66	18	10	9	61	44	36	74	133	78
RC-T1-9_contig.fa_viral_9	0	1	4	0	0	1	0	0	1	0	0	0	24	42	48	0	0	0	1	0	0	0	0	0
RC-T1-9_contig.fa_viral_10	1	1	0	1	9	2	3	0	0	0	0	0	23	23	116	0	0	0	0	0	0	1	0	0
RC-T1-9_contig.fa_viral_11	0	0	0	0	0	0	0	0	1	0	0	0	3	2	1279	0	0	0	0	0	0	0	0	1
RC-T1-9_contig.fa_viral_12	0	0	1	0	2	1	0	1	0	0	0	0	7	8	118	0	0	0	0	0	0	0	1	0
RC-T1-9_contig.fa_viral_13	0	0	0	0	0	0	0	0	0	0	0	0	2	0	221	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	71	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_15	58	83	52	63	47	107	47	76	79	90	102	67	50	58	100	146	68	61	82	63	61	60	121	78
RC-T1-9_contig.fa_viral_16	0	1	0	0	0	1	0	1	1	0	0	4	0	0	691	1	0	0	0	0	0	0	2	0
RC-T1-9_contig.fa_viral_17	3	9	8	8	2	3	2	2	1	3	2	1	10	19	102	3	7	2	4	1	1	1	10	6
RC-T1-9_contig.fa_viral_18	0	0	0	0	0	0	0	0	0	0	0	0	23	34	97	0	0	0	0	0	0	1	0	0
RC-T1-9_contig.fa_viral_19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	117	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_20	0	1	0	0	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_21	2622	3201	2505	2648	1611	2923	1891	2366	1966	2644	2983	2472	1855	1373	1959	4197	2586	2194	2922	2671	2549	2219	4350	2321
RC-T1-9_contig.fa_viral_22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	536	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_23	1	0	0	0	0	6	0	1	0	0	0	0	0	3	67	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	121	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_25	0	0	0	0	3	3	0	0	0	0	0	0	0	45	299	2	2	2	0	0	0	1	0	0
RC-T1-9_contig.fa_viral_26	0	3	5	0	1	3	0	0	1	0	0	0	1	4	69	1	0	0	2	2	1	1	0	7
RC-T1-9_contig.fa_viral_27	1	1	0	0	1	1	0	0	1	1	0	0	0	0	362	0	0	0	0	1	0	3	4	2
RC-T1-9_contig.fa_viral_28	0	3	7	4	4	9	1	3	2	5	3	0	0	12	130	1	0	2	1	1	2	3	2	4
RC-T1-9_contig.fa_viral_29	4	9	6	6	5	4	4	4	0	3	9	11	2	2	108	1	2	5	6	10	9	4	18	5
RC-T1-9_contig.fa_viral_30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	197	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_31	0	0	0	0	0	0	0	0	0	0	0	0	0	11	84	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_32	0	1	0	1	0	1	1	1	3	0	0	0	0	0	184	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_33	4	7	5	3	10	5	8	4	7	3	0	4	5	15	88	7	6	2	16	7	0	2	9	5
RC-T1-9_contig.fa_viral_34	0	0	0	2	1	0	0	0	0	0	0	0	0	0	62	1	0	0	2	1	1	0	2	2
RC-T1-9_contig.fa_viral_35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	163	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_36	0	0	0	0	0	1	0	0	0	0	1	1	0	1	324	0	0	0	0	0	0	0	1	1
RC-T1-9_contig.fa_viral_37	0	0	0	0	0	0	0	1	0	0	0	0	0	0	132	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_38	0	0	0	0	0	0	0	0	1	0	0	0	0	0	97	0	0	0	0	0	0	0	0	1
RC-T1-9_contig.fa_viral_39	6	2	2	4	1	10	0	6	3	1	1	2	16	25	152	2	2	0	2	2	7	3	19	7
RC-T1-9_contig.fa_viral_40	0	0	0	0	3	1	0	1	0	2	1	0	3	28	115	1	0	1	5	1	0	3	2	1
RC-T1-9_contig.fa_viral_41	1	1	4	2	1	1	1	3	5	0	5	2	12	16	57	4	3	0	6	4	4	0	4	1
RC-T1-9_contig.fa_viral_42	0	2	5	2	2	1	0	2	1	1	0	0	15	29	60	1	1	0	1	0	1	0	6	0
RC-T1-9_contig.fa_viral_43	0	0	1	0	0	0	0	0	0	0	0	0	4	44	74	0	0	0	1	0	0	0	0	0
RC-T1-9_contig.fa_viral_44	0	0	0	0	0	0	1	0	1	0	0	0	0	0	339	0	0	0	0	0	0	0	1	0
RC-T1-9_contig.fa_viral_45	0	1	0	0	0	1	0	0	11	0	0	0	0	0	148	0	0	0	0	0	0	1	1	1
RC-T1-9_contig.fa_viral_46	0	0	0	0	0	0	0	0	0	0	0	0	26	21	92	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_47	0	0	2	0	0	2	0	1	0	1	0	3	0	8	301	0	0	0	0	1	0	0	0	1
RC-T1-9_contig.fa_viral_48	3	7	6	3	8	6	1	1	7	1	1	2	8	7	102	3	6	2	5	1	2	2	4	1
RC-T1-9_contig.fa_viral_49	2	15	19	8	18	66	7	8	3	1	0	4	44	58	58	0	1	0	4	25	8	4	13	6
RC-T1-9_contig.fa_viral_50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	143	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_51	9	5	4	5	7	4	1	1	2	0	0	0	8	9	67	0	5	0	3	0	0	2	7	3
RC-T1-9_contig.fa_viral_52	2	6	1	4	8	2	2	0	0	0	0	2	0	2	81	0	0	1	0	0	1	3	1	2
RC-T1-9_contig.fa_viral_53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	131	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	112	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_55	3	7	11	4	6	11	3	8	2	5	2	2	1	15	90	3	0	0	5	2	1	4	9	4
RC-T1-9_contig.fa_viral_56	0	0	0	0	0	0	0	0	0	0	0	0	0	2	59	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_57	2	0	1	0	4	2	0	0	1	0	0	0	76	74	123	1	3	1	2	0	0	0	1	0
RC-T1-9_contig.fa_viral_58	0	0	0	0	0	0	0	0	0	0	0	0	0	0	169	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_59	0	0	0	0	0	0	0	0	0	0	0	0	8	12	51	0	0	0	0	0	0	0	0	0
SC-T1-9_contig.fa_provirus_2	3	12	6	23	4	19	116	46	41	14	2	2	0	0	0	44	1	12	29	47	117	83	38	23
SC-T1-9_contig.fa_provirus_3	0	0	0	3	1	3	67	26	3	0	1	0	0	0	0	1	0	0	11	74	137	12	10	0
SC-T1-9_contig.fa_provirus_4	3	5	2	31	3	15	97	57	24	2	3	3	0	0	0	5	0	1	24	52	100	62	75	18
SC-T1-9_contig.fa_viral_1	1	3	0	5	4	8	18	17	36	28	26	12	0	0	0	72	1	23	2	170	258	29	8	4
SC-T1-9_contig.fa_viral_2	18	22	40	4	2	10	37	47	16	3	0	0	2	4	5	0	0	2	37	57	65	25	23	17
SC-T1-9_contig.fa_viral_3	1	0	0	1	0	1	9	1	4	0	2	2	0	0	0	0	0	0	4	38	103	0	0	1
SC-T1-9_contig.fa_viral_5	3	7	16	4	3	7	4	10	2	0	1	1	10	9	0	0	0	2	40	309	52	2	5	3
SC-T1-9_contig.fa_viral_6	0	1	2	2	3	21	8	12	7	0	1	0	0	0	0	0	0	0	8	31	79	7	9	10
SC-T1-9_contig.fa_viral_7	0	3	1	4	2	14	25	30	26	0	14	5	0	0	0	14	0	0	3	386	553	41	39	4
SC-T1-9_contig.fa_viral_8	63	75	54	50	11	38	48	34	24	16	9	11	4	6	8	13	14	21	58	41	83	27	86	41
SC-T1-9_contig.fa_viral_9	14	54	15	33	55	215	56	78	95	20	15	0	1	4	4	7	0	4	40	111	120	55	132	103
SC-T1-9_contig.fa_viral_10	0	0	0	1	1	0	1	4	3	0	3	2	0	0	0	12	0	0	2	156	235	4	0	0
SC-T1-9_contig.fa_viral_11	0	0	1	2	0	3	17	5	0	0	1	2	0	0	0	1	0	0	2	146	241	5	9	0
SC-T1-9_contig.fa_viral_12	1	7	4	6	2	13	18	27	28	2	0	1	0	0	0	7	0	3	6	116	109	22	19	18
SC-T1-9_contig.fa_viral_13	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	5	0	0	1	52	122	0	1	0
SC-T1-9_contig.fa_viral_14	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	149	0	0	0
SC-T1-9_contig.fa_viral_15	0	3	2	2	8	18	8	13	16	0	0	0	0	0	0	0	0	6	6	83	301	5	9	5
SC-T1-9_contig.fa_viral_16	42	87	63	87	45	74	80	116	88	139	120	115	21	32	22	284	48	58	118	126	263	93	94	60
SC-T1-9_contig.fa_viral_17	1	3	2	0	1	3	1	1	2	7	4	11	0	0	0	12	3	5	7	31	93	4	3	2
SC-T1-9_contig.fa_viral_18	2	1	2	0	0	1	3	9	3	25	85	65	0	0	0	54	0	16	34	23	64	9	2	2
SC-T1-9_contig.fa_viral_19	2	8	7	2	0	1	13	70	0	0	0	0	0	0	0	0	1	1	62	130	93	7	4	8
SC-T1-9_contig.fa_viral_20	0	0	0	0	0	0	4	0	1	1	3	0	0	0	0	1	0	0	1	48	91	1	1	3
SC-T1-9_contig.fa_viral_21	5	23	14	18	13	17	14	21	4	5	3	2	0	0	0	6	0	12	290	319	394	19	23	9
SC-T1-9_contig.fa_viral_22	1	8	3	10	1	4	6	4	5	2	0	1	1	1	0	5	0	3	18	33	122	11	12	3
SC-T1-9_contig.fa_viral_23	5	66	144	35	13	34	63	116	57	13	27	14	10	7	4	41	3	16	88	133	118	35	55	47
SC-T1-9_contig.fa_viral_24	37	51	53	57	10	51	89	99	23	18	17	20	6	6	3	21	34	14	143	93	104	42	89	42
UAB-T1-6_contig.fa_viral_236	3	8	4	5	1	8	22	20	0	0	0	0	0	0	0	0	0	0	0	5	3	32	71	18
UAB-T1-6_contig.fa_viral_237	4	3	1	3	0	0	0	2	2	0	8	5	7	0	2	5	2	2	1	2	1	2	87	4
UAB-T1-6_contig.fa_viral_238	62	62	26	54	17	42	49	17	38	49	57	103	34	28	21	95	123	75	56	30	14	36	208	58
UAB-T1-6_contig.fa_viral_239	8	17	0	7	0	1	3	2	1	0	1	0	0	0	0	1	0	1	3	2	0	1	100	50
UAB-T1-6_contig.fa_viral_240	114	120	102	113	11	40	231	175	47	35	10	44	1	2	0	81	140	93	90	68	50	89	334	114
UAB-T1-6_contig.fa_viral_241	30	18	6	26	5	15	20	10	20	11	15	36	2	5	2	29	67	41	14	12	9	5	143	40
UAB-T1-6_contig.fa_viral_242	5	39	37	23	7	52	32	58	3	1	2	2	0	2	0	0	2	1	29	28	6	25	75	37
UAB-T1-6_contig.fa_viral_243	15	30	2	59	1	15	42	23	0	0	1	0	0	0	0	0	0	0	19	8	5	13	195	61
UAB-T1-6_contig.fa_viral_244	5	28	38	29	6	24	18	19	0	0	0	0	0	0	0	0	0	0	16	15	2	16	56	31
UAB-T1-6_contig.fa_viral_245	1	18	29	37	7	15	38	55	105	15	27	10	3	2	0	7	0	10	40	52	20	17	92	25
UAB-T1-6_contig.fa_viral_246	218	37	17	32	17	39	31	16	22	27	57	49	17	12	17	56	107	61	39	11	11	16	136	63
UAB-T1-6_contig.fa_viral_247	40	38	47	30	13	13	37	47	16	13	2	14	1	0	1	40	51	33	20	25	4	24	71	22
UAB-T1-6_contig.fa_viral_248	27	14	0	16	3	8	26	15	7	0	4	6	1	1	1	10	7	2	11	6	4	8	83	14
UAB-T1-6_contig.fa_viral_249	33	48	2	54	5	20	53	45	4	1	3	4	0	1	3	2	9	2	10	3	0	34	175	149
UAB-T1-6_contig.fa_viral_251	14	12	2	23	2	7	27	47	8	4	0	11	5	4	3	8	26	16	12	5	3	8	213	124
UAB-T1-6_contig.fa_viral_252	16	28	15	6	3	9	3	3	2	6	10	6	2	3	4	8	27	9	2	4	0	8	62	10
UAB-T1-6_contig.fa_viral_253	18	45	5	33	7	5	14	4	0	2	1	0	4	2	6	0	1	0	2	4	0	9	79	62
UAB-T1-6_contig.fa_viral_254	8	30	36	31	7	20	26	42	8	30	34	90	25	11	11	116	88	63	31	21	29	37	155	103
UAB-T1-6_contig.fa_viral_255	17	65	125	25	9	18	31	60	0	0	0	0	0	0	0	0	0	0	18	15	10	42	91	73
UAB-T1-6_contig.fa_viral_256	6	49	26	45	39	44	10	16	9	9	10	1	40	163	24	10	0	6	5	9	5	19	164	26
UAB-T1-6_contig.fa_viral_257	49	73	17	57	9	28	21	24	4	21	19	22	5	9	6	15	44	26	23	13	7	23	163	119
UAB-T1-6_contig.fa_viral_258	21	49	58	72	30	198	132	125	7	2	1	1	1	1	1	0	0	1	74	81	28	77	170	107
UAB-T1-6_contig.fa_viral_259	19	50	44	32	20	43	19	40	8	13	6	16	87	15	14	5	10	6	25	30	17	19	228	52
UAB-T1-6_contig.fa_viral_260	28	41	5	29	3	12	38	18	8	1	4	4	0	1	0	2	3	1	6	4	1	23	106	35
UAB-T1-6_contig.fa_viral_261	43	43	1	8	0	2	6	0	0	0	1	2	0	0	0	1	5	0	2	1	1	6	75	15
UAB-T1-6_contig.fa_viral_262	75	194	66	84	7	55	46	100	97	45	12	17	0	0	0	145	16	60	63	60	99	124	138	61
UAB-T1-6_contig.fa_viral_263	43	125	120	45	8	89	73	135	27	3	1	5	19	14	20	4	2	4	62	109	36	62	139	74
UAB-T1-6_contig.fa_viral_264	62	120	67	109	58	100	54	72	53	60	57	48	20	26	40	81	26	43	71	71	88	93	179	94
UAB-T1-6_contig.fa_viral_265	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	0
UAB-T1-6_contig.fa_viral_266	124	19	2	53	6	19	56	11	13	15	6	7	2	1	0	3	5	4	35	1	9	23	136	72
UAB-T1-6_contig.fa_viral_267	24	24	17	23	1	10	52	39	10	8	7	26	1	0	0	21	43	25	27	14	10	13	98	25
UAB-T1-6_contig.fa_viral_268	2	16	6	60	3	16	132	88	23	5	1	8	0	0	0	4	2	0	40	83	163	111	129	42
UAB-T1-6_contig.fa_viral_269	3	11	10	64	6	30	175	105	66	9	7	7	0	0	0	3	0	4	41	104	209	100	126	43
UAB-T1-6_contig.fa_viral_270	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	386	0
UAB-T1-6_contig.fa_viral_271	208	166	45	113	24	98	88	57	19	69	95	99	12	46	17	90	207	118	68	33	23	81	504	321
UAB-T1-9_contig.fa_provirus_1	12	9	4	5	5	8	3	1	2	4	9	12	0	1	0	8	18	12	4	1	1	2	23	9
UAB-T1-9_contig.fa_viral_1	32	35	22	41	6	31	42	59	32	16	17	14	5	12	6	49	40	16	57	53	48	32	91	56
UAB-T1-9_contig.fa_viral_2	9	26	11	77	12	31	255	156	81	17	13	14	0	0	0	23	0	9	67	216	384	175	139	79
UAB-T1-9_contig.fa_viral_3	519	1038	1075	891	596	1258	607	648	967	634	697	563	367	240	253	1399	542	455	660	758	639	601	1264	837
UAB-T1-9_contig.fa_viral_4	4	16	15	25	5	19	19	20	4	1	4	6	5	7	4	7	5	2	12	16	8	10	318	229
UAB-T1-9_contig.fa_viral_6	39	34	31	35	12	27	26	24	15	14	18	19	7	4	3	20	49	22	24	21	7	9	241	157
UAB-T1-9_contig.fa_viral_7	31	69	62	17	4	69	114	101	11	1	0	0	4	3	5	3	1	0	119	116	70	65	175	98
UAB-T1-9_contig.fa_viral_8	28	35	11	30	22	23	19	22	8	12	6	10	12	16	11	12	26	28	10	3	3	18	141	86
UAB-T1-9_contig.fa_viral_10	29	56	7	76	7	27	78	57	7	5	6	7	1	1	1	7	7	7	11	2	1	37	185	121
UAB-T1-9_contig.fa_viral_11	11	35	41	11	1	6	12	25	0	0	0	0	0	0	0	0	0	0	11	23	2	37	55	70
UAB-T1-9_contig.fa_viral_13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	119
UAB-T1-9_contig.fa_viral_14	62	12	3	22	4	10	39	21	10	25	39	59	0	2	0	28	70	29	55	22	16	5	243	89
UAB-T1-9_contig.fa_viral_15	29	50	52	35	6	12	32	57	4	1	3	3	7	2	3	3	9	5	52	52	2	70	97	74
UAB-T1-9_contig.fa_viral_16	167	250	113	178	68	159	141	127	93	145	128	132	59	62	66	217	278	167	172	158	189	209	385	327
UAB-T1-9_contig.fa_viral_17	18	36	2	25	2	0	10	6	0	0	0	0	0	0	0	0	0	0	5	1	0	4	71	79
UAB-T1-9_contig.fa_viral_18	2	2	1	3	0	0	1	1	1	2	2	1	3	0	1	3	7	13	0	9	1	0	66	79
UAB-T1-9_contig.fa_viral_19	369	286	137	272	83	239	246	164	197	221	248	417	108	78	36	377	661	354	299	129	153	158	879	406
UAB-T1-9_contig.fa_viral_20	24	24	2	41	3	6	7	15	0	0	4	2	1	1	0	0	2	1	2	6	5	10	97	86
UAB-T1-9_contig.fa_viral_21	11	36	40	20	10	51	44	69	18	2	14	21	2	0	0	0	0	0	47	37	26	31	114	59
UAB-T1-9_contig.fa_viral_22	63	273	437	129	53	87	84	108	1	4	1	7	5	2	2	1	6	4	66	94	16	123	304	275
UAB-T1-9_contig.fa_viral_23	132	31	10	54	15	47	31	24	20	12	30	6	0	0	0	3	4	3	48	8	20	29	56	88
UAB-T1-9_contig.fa_viral_24	1	24	138	72	20	39	9	31	8	1	4	1	4	0	1	5	5	4	26	25	32	27	33	139
UAB-T1-9_contig.fa_viral_25	25	88	8	30	1	8	29	7	0	1	0	1	0	0	0	1	2	0	1	2	0	36	192	112
UAB-T1-9_contig.fa_viral_26	29	74	29	18	1	0	24	15	0	0	0	0	0	0	0	0	0	0	15	3	0	85	108	128
UAB-T1-9_contig.fa_viral_27	38	100	25	66	10	22	70	45	18	37	19	30	12	6	14	41	105	58	27	34	16	61	302	268
UAB-T1-9_contig.fa_viral_28	66	51	48	44	15	60	77	77	6	1	4	3	1	1	0	9	9	1	26	41	39	29	70	64
UAB-T1-9_contig.fa_viral_29	7	73	220	145	52	89	3	35	1	0	0	0	3	1	0	1	0	0	13	0	1	34	32	120
UAB-T1-9_contig.fa_viral_30	37	110	16	50	3	17	25	11	0	0	0	1	0	0	0	0	0	0	4	0	0	37	181	114
UAB-T1-9_contig.fa_viral_31	63	140	46	27	0	6	33	33	0	0	0	0	6	6	0	0	1	1	5	5	2	107	150	210
UAB-T1-9_contig.fa_viral_32	13	61	80	19	10	26	33	47	2	0	0	0	0	0	0	0	0	0	20	31	3	34	71	77
UAB-T1-9_contig.fa_viral_34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	68	161
UAB-T1-9_contig.fa_viral_35	4	8	9	4	7	11	11	13	2	5	7	1	4	5	8	19	4	10	30	5	9	9	69	90
UAB-T1-9_contig.fa_viral_36	5	20	3	12	0	10	3	19	1	0	0	1	0	1	1	0	2	1	1	2	1	6	228	251
UAB-T1-9_contig.fa_viral_37	3	42	17	34	26	7	2	7	7	0	1	0	0	6	1	0	0	0	0	1	0	17	29	568
UAB-T1-9_contig.fa_viral_38	9	2	3	0	0	4	1	4	4	4	3	4	2	0	3	18	1	0	0	3	2	0	11	98
UAB-T1-9_contig.fa_viral_39	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	233
UAB-T1-9_contig.fa_viral_40	16	9	1	13	0	8	2	5	2	7	8	5	3	3	5	5	9	19	3	3	2	7	75	45
UAB-T1-9_contig.fa_viral_41	50	134	10	45	4	14	51	41	0	3	3	5	2	1	2	4	6	1	11	1	3	34	234	193
UAB-T1-9_contig.fa_viral_42	50	91	18	53	11	35	47	33	7	15	46	55	17	7	20	25	73	47	34	14	8	23	246	196
RP-T1-6_contig.fa_viral_396	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	355	129	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_397	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	163	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_398	0	0	0	0	0	0	0	0	0	4	1	3	2	0	0	5	109	61	1	0	0	0	0	1
RP-T1-6_contig.fa_viral_399	2	3	1	1	0	0	2	0	1	8	11	27	0	0	0	27	122	41	3	0	0	0	3	12
RP-T1-6_contig.fa_viral_400	206	192	105	177	71	119	158	111	87	159	242	536	134	84	65	360	994	456	221	119	94	123	439	237
RP-T1-6_contig.fa_viral_401	6	1	0	0	0	0	0	0	0	2	7	6	0	0	0	12	82	37	1	0	0	0	1	0
RP-T1-6_contig.fa_viral_402	29	2	0	2	4	4	9	4	4	33	18	60	0	1	0	60	202	60	9	0	1	6	26	7
RP-T1-6_contig.fa_viral_403	2	0	0	0	0	0	0	0	0	1	0	6	0	0	0	6	62	14	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_404	0	0	0	0	0	0	0	0	0	16	24	11	0	0	0	54	94	22	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_405	5	0	0	0	0	1	0	0	0	3	4	5	0	0	0	34	234	98	2	2	0	0	1	1
RP-T1-6_contig.fa_viral_406	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	101	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_407	0	0	0	0	0	0	0	0	0	2	6	5	0	0	0	23	83	15	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_408	0	1	0	2	0	2	0	0	0	7	1	6	0	0	0	10	76	32	2	2	0	0	0	0
RP-T1-6_contig.fa_viral_409	0	0	1	0	0	2	0	0	0	6	10	16	0	0	0	63	326	126	2	0	0	0	0	1
RP-T1-6_contig.fa_viral_410	3	0	0	0	0	0	0	0	0	15	33	9	0	0	0	58	137	80	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_411	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	352	40	3	0	0	0	0	0
RP-T1-6_contig.fa_viral_413	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	172	0	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_414	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	100	5	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_415	66	57	33	14	25	40	15	10	13	36	66	75	23	14	12	63	237	93	34	8	6	11	69	19
RP-T1-6_contig.fa_viral_416	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	22	364	43	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_417	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	7	278	3	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_418	1	0	0	0	0	0	0	0	0	0	3	2	0	0	0	6	90	53	2	0	2	0	0	0
RP-T1-6_contig.fa_viral_419	0	6	1	7	0	6	9	7	10	24	14	15	0	0	0	477	85	107	5	8	21	9	5	3
RP-T1-6_contig.fa_viral_420	69	81	60	90	31	38	58	50	54	69	65	123	22	21	11	250	533	275	114	47	37	49	213	120
RP-T1-6_contig.fa_viral_421	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	40	74	30	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_422	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	71	143	49	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_423	29	10	2	13	2	4	4	9	3	10	7	17	0	0	0	24	167	20	17	7	4	1	19	8
RP-T1-6_contig.fa_viral_424	6	1	1	1	2	2	0	0	1	3	3	7	0	0	0	17	112	67	1	5	0	3	7	6
RP-T1-6_contig.fa_viral_425	3	0	0	0	0	0	0	0	0	6	18	0	0	0	0	287	183	109	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_428	10	3	0	0	1	1	0	0	1	5	6	19	0	0	0	112	408	0	2	0	0	3	0	0
RP-T1-6_contig.fa_viral_429	2	1	2	0	0	2	2	0	0	4	10	8	0	0	0	214	112	28	0	1	0	0	3	0
RP-T1-6_contig.fa_viral_430	2	0	0	0	1	0	0	0	0	10	12	38	0	0	0	32	131	104	1	2	0	0	1	0
RP-T1-6_contig.fa_viral_431	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77	160	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_432	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	139	80	51	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_433	22	16	10	11	1	4	38	18	5	23	13	22	1	1	1	135	286	124	28	16	8	10	56	11
RP-T1-6_contig.fa_viral_434	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	181	59	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_435	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	75	34	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_436	11	20	7	10	2	10	19	10	23	23	32	48	0	1	1	87	211	107	27	17	16	10	49	12
RP-T1-6_contig.fa_viral_437	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	6	119	6	0	0	0	1	0	0
RP-T1-6_contig.fa_viral_438	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	2	100	0	4	0	0	0	0	0
RP-T1-6_contig.fa_viral_439	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	203	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_440	17	18	47	19	4	19	22	17	19	22	130	111	1	0	0	126	222	99	45	26	31	10	62	43
RP-T1-6_contig.fa_viral_441	1	0	0	0	0	0	7	3	1	5	3	42	0	0	0	14	86	16	1	1	1	1	13	6
RP-T1-6_contig.fa_viral_442	4	3	2	6	1	5	7	3	4	8	11	11	0	0	0	16	42	15	7	8	3	1	16	5
RP-T1-6_contig.fa_viral_443	108	97	45	117	26	62	96	75	58	75	86	133	23	22	2	175	312	176	121	74	50	75	282	138
RP-T1-6_contig.fa_viral_444	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	330	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_445	2	0	0	1	1	0	0	0	0	6	15	3	0	0	0	275	152	31	1	0	0	1	1	0
RP-T1-6_contig.fa_viral_446	3	4	2	4	3	2	1	1	1	0	2	3	2	5	2	15	109	78	4	3	3	2	2	3
RP-T1-6_contig.fa_viral_447	43	39	36	30	7	17	39	44	9	22	28	66	7	2	3	98	177	91	41	50	36	19	130	57
RP-T1-6_contig.fa_viral_448	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	117	45	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_449	1	0	0	2	0	0	0	0	1	2	5	35	0	0	0	10	62	15	0	1	0	0	3	1
RP-T1-6_contig.fa_viral_450	21	14	23	17	4	13	31	32	7	9	7	11	0	1	0	101	206	72	25	15	19	11	49	26
RP-T1-6_contig.fa_viral_452	4	1	0	3	0	2	0	2	3	2	1	1	1	0	0	60	68	40	4	4	4	0	4	3
RP-T1-6_contig.fa_viral_453	3	4	5	8	3	8	5	8	1	8	3	10	1	0	0	10	44	17	3	1	1	0	9	4
RP-T1-6_contig.fa_viral_454	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	165	293	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_455	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	2	144	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_456	21	29	16	29	6	21	51	29	44	34	39	65	0	0	0	161	354	183	53	29	36	21	84	14
RP-T1-6_contig.fa_viral_457	0	0	0	0	0	0	0	0	0	3	14	2	0	0	0	54	63	17	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_158	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	8	137	5	6	0	0	0	0	0
RP-T1-6_contig.fa_viral_159	4	4	1	1	1	0	2	4	1	3	6	14	1	0	1	46	179	60	9	5	1	3	7	3
RP-T1-6_contig.fa_viral_160	78	68	55	35	26	45	29	21	9	34	90	57	30	18	17	105	267	92	38	25	12	26	89	43
RP-T1-6_contig.fa_viral_161	0	0	0	0	0	0	0	1	0	0	9	10	0	0	2	16	164	54	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_162	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	196	79	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_163	0	0	1	0	0	0	1	0	2	5	5	5	0	0	0	132	238	6	1	1	4	0	0	0
RP-T1-6_contig.fa_viral_164	22	27	9	22	14	10	21	9	14	20	39	172	8	6	3	81	237	80	28	23	8	9	40	31
RP-T1-6_contig.fa_viral_165	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	146	48	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_166	0	0	0	0	0	0	2	0	0	0	14	9	0	0	0	24	71	23	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_167	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	7	68	37	0	0	0	0	0	1
RP-T1-6_contig.fa_viral_168	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	145	30	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_169	0	0	0	0	0	0	0	0	0	0	3	7	0	0	0	9	73	19	4	0	0	0	1	4
RP-T1-6_contig.fa_viral_170	0	0	1	3	0	0	0	0	0	1	3	6	0	0	0	132	262	233	0	4	4	1	4	4
RP-T1-6_contig.fa_viral_171	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	177	47	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_173	2	3	1	0	1	0	0	0	0	3	6	3	0	1	0	7	75	48	1	0	0	0	0	4
RP-T1-6_contig.fa_viral_174	36	12	13	32	5	20	41	17	42	74	48	115	5	8	1	158	345	216	33	9	10	17	84	23
RP-T1-6_contig.fa_viral_175	22	0	0	0	0	0	0	0	0	5	58	41	0	0	0	27	249	230	0	1	0	0	2	2
RP-T1-6_contig.fa_viral_176	11	9	1	4	3	2	2	0	0	2	6	5	0	0	0	15	83	38	2	1	2	0	4	4
RP-T1-6_contig.fa_viral_177	0	0	0	0	0	0	0	0	0	3	3	12	0	0	0	370	165	33	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_178	51	31	34	33	25	45	26	31	36	31	39	29	31	15	20	139	275	91	45	41	33	35	53	37
RP-T1-6_contig.fa_viral_179	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	4	128	61	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_180	5	2	1	4	0	1	3	0	0	8	30	63	0	0	0	47	141	38	4	1	1	0	8	2
RP-T1-6_contig.fa_viral_181	0	0	1	1	0	0	0	0	5	24	7	15	0	0	0	82	114	35	8	0	0	1	0	0
RP-T1-6_contig.fa_viral_182	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	11	76	52	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_183	0	1	0	0	0	0	0	0	0	1	6	1	0	0	0	16	56	25	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_184	27	7	1	8	0	7	17	4	19	35	8	56	3	6	6	90	174	109	13	5	4	9	38	4
RP-T1-6_contig.fa_viral_185	0	6	2	1	3	5	2	0	2	3	1	3	2	1	1	297	659	0	3	1	1	1	2	2
RP-T1-6_contig.fa_viral_186	0	0	0	1	0	0	0	1	0	6	13	4	0	0	0	19	72	15	0	0	0	0	0	1
RP-T1-6_contig.fa_viral_187	2	1	3	3	0	2	2	1	0	0	5	3	0	2	1	125	242	195	1	4	0	0	4	1
RP-T1-6_contig.fa_viral_188	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	153	50	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_189	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	6	80	32	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_190	2	1	1	4	0	7	10	10	11	59	32	9	0	0	0	130	110	42	29	21	30	6	7	4
RP-T1-6_contig.fa_viral_191	4	5	3	1	1	2	5	4	1	7	4	20	3	0	1	19	59	45	3	10	7	4	16	16
RP-T1-6_contig.fa_viral_192	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	68	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_193	0	0	0	0	0	0	0	0	0	17	38	173	0	0	0	50	147	48	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	122	96	7	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_195	14	9	10	11	2	2	16	6	5	17	12	37	2	0	0	60	138	68	26	17	11	12	30	10
RP-T1-6_contig.fa_viral_196	6	0	0	0	0	1	1	0	0	8	11	14	0	0	0	16	69	12	0	0	0	0	1	2
RP-T1-6_contig.fa_viral_197	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	68	105	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_198	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	94	55	19	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_199	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	59	69	7	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_200	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	162	376	0	0	0	0	0	0	0
11B-T1-3_contig.fa_viral_15	3666	1327	883	737	544	982	550	585	677	1006	991	1175	615	439	590	1500	1194	838	730	618	739	878	1507	752
11B-T1-3_contig.fa_viral_16	206	253	91	66	4	22	37	56	1	0	1	0	4	1	0	0	2	0	18	6	6	219	217	230
11B-T1-3_contig.fa_viral_17	60	11	0	6	2	6	6	0	3	0	1	0	0	0	0	0	0	0	0	0	2	4	61	48
11B-T1-6_contig.fa_provirus_1	1	233	3	6	0	23	3	7	10	1	0	0	0	0	0	0	0	0	3	8	4	6	8	3
11B-T1-6_contig.fa_viral_1	0	159	0	0	0	8	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1
11B-T1-6_contig.fa_viral_2	4	111	9	13	13	56	21	41	32	11	2	0	9	3	0	9	2	1	11	27	26	32	50	42
11B-T1-6_contig.fa_viral_3	129	116	117	90	9	23	205	157	27	33	9	33	1	0	0	145	244	146	92	98	45	84	286	61
11B-T1-6_contig.fa_viral_4	23	77	145	32	14	59	54	127	20	8	2	1	21	18	6	12	5	15	69	89	54	47	78	49
11B-T1-6_contig.fa_viral_5	879	691	72	372	41	120	45	33	5	64	17	58	18	23	13	29	20	23	17	11	5	110	157	172
11B-T1-6_contig.fa_viral_6	0	142	11	7	13	88	19	22	41	6	2	0	0	0	0	0	0	1	3	22	13	26	39	41
11B-T1-6_contig.fa_viral_7	2	196	5	5	14	80	20	20	32	6	1	0	0	1	0	4	0	0	7	21	25	23	50	38
11B-T1-6_contig.fa_viral_8	0	276	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11B-T1-6_contig.fa_viral_9	12	93	329	161	96	168	22	40	6	2	1	2	18	14	6	7	8	3	7	3	0	37	49	87
11B-T1-6_contig.fa_viral_11	2	202	5	13	20	86	17	48	9	6	3	0	0	0	2	0	0	1	9	47	33	33	108	54
11B-T1-6_contig.fa_viral_12	0	315	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11B-T1-6_contig.fa_viral_13	0	283	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11B-T1-6_contig.fa_viral_14	0	68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11B-T1-9_contig.fa_provirus_2	6	34	151	12	4	14	7	40	0	0	0	0	1	0	0	0	0	0	14	6	4	22	9	12
11B-T1-9_contig.fa_viral_1	11	69	302	114	36	69	0	3	0	0	0	0	2	2	0	0	0	0	0	0	0	12	13	24
11B-T1-9_contig.fa_viral_2	0	15	163	5	0	7	5	24	0	1	0	0	3	0	1	0	0	0	4	3	1	11	7	26
11B-T1-9_contig.fa_viral_4	27	89	111	61	20	86	77	109	34	6	5	7	3	1	5	4	7	1	50	48	34	42	143	90
11B-T1-9_contig.fa_viral_6	6	56	68	55	67	294	87	130	158	23	56	6	4	10	7	78	6	29	101	150	118	81	156	107
11B-T1-9_contig.fa_viral_8	96	294	492	109	20	122	243	309	1	0	0	2	2	4	0	0	2	2	103	146	39	133	341	244
11B-T1-9_contig.fa_viral_9	0	50	151	9	9	26	21	38	0	0	0	0	7	11	1	0	0	0	6	6	2	9	18	43
11B-T1-9_contig.fa_viral_10	13	94	283	121	19	36	6	15	0	0	1	0	23	7	0	0	0	0	2	1	1	30	34	93
11B-T1-9_contig.fa_viral_11	0	21	74	24	4	18	8	11	0	1	0	0	1	0	0	2	2	1	1	5	1	5	15	22
11B-T1-9_contig.fa_viral_12	8	77	286	21	10	68	19	106	0	0	0	0	0	0	0	0	0	0	94	38	15	54	35	21
11B-T1-9_contig.fa_viral_13	17	98	128	41	5	72	65	75	21	0	1	0	5	1	0	1	2	2	16	27	16	35	59	44
11B-T1-9_contig.fa_viral_14	5	58	225	11	9	53	18	69	0	0	0	0	0	0	0	0	0	0	88	48	9	38	39	15
11B-T1-9_contig.fa_viral_15	22	199	431	129	32	84	91	330	67	25	20	9	17	15	6	13	2	12	142	196	86	121	181	132
11B-T1-9_contig.fa_viral_16	15	133	417	35	15	163	32	112	0	0	0	0	0	0	0	0	0	0	121	39	19	100	72	53
11B-T1-9_contig.fa_viral_17	19	79	109	42	11	69	52	101	19	4	0	5	19	8	6	2	0	3	104	182	76	42	74	42
11B-T1-9_contig.fa_viral_18	5	37	134	3	6	23	15	35	0	0	0	0	0	0	0	0	0	0	20	2	4	37	15	9
11B-T1-9_contig.fa_viral_20	23	30	144	57	31	84	11	15	12	2	1	6	2	2	1	4	14	5	21	8	5	13	35	44
11B-T1-9_contig.fa_viral_21	16	119	362	20	20	125	31	105	0	0	0	0	0	0	0	0	0	0	139	57	16	105	48	44
11B-T1-9_contig.fa_viral_22	6	15	79	3	1	7	8	30	0	0	0	0	0	0	0	0	0	0	19	10	4	14	9	3
11B-T1-9_contig.fa_viral_23	5	66	339	133	59	129	19	36	12	3	4	8	9	3	0	8	6	2	30	28	23	33	33	94
11B-T1-9_contig.fa_viral_24	4	33	121	13	8	25	15	71	1	0	0	1	12	7	2	0	0	0	284	76	64	21	22	15
11B-T1-9_contig.fa_viral_25	28	141	294	93	28	113	89	238	22	7	8	8	24	29	9	22	4	11	144	144	65	71	109	73
11B-T1-9_contig.fa_viral_26	1	28	100	20	9	30	5	4	0	0	0	0	0	0	0	0	0	0	8	23	2	2	1	17
11B-T1-9_contig.fa_viral_27	95	301	550	164	57	141	149	206	9	8	1	5	5	3	1	8	5	4	113	202	51	168	411	340
11B-T1-9_contig.fa_viral_28	0	1	157	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0
11B-T1-9_contig.fa_viral_29	10	28	156	41	28	53	21	17	6	6	0	7	12	2	0	7	4	0	20	24	21	18	46	58
11B-T1-9_contig.fa_viral_30	29	103	418	31	26	140	42	150	0	0	0	0	0	0	0	0	0	0	105	63	17	100	63	32
11B-T1-9_contig.fa_viral_31	6	47	137	11	2	30	8	33	0	0	0	0	0	0	0	0	0	0	10	5	0	33	10	12
11B-T1-9_contig.fa_viral_32	8	53	152	34	10	25	32	87	2	0	1	0	16	13	4	4	2	4	34	34	13	24	32	17
11B-T1-9_contig.fa_viral_33	6	16	94	13	22	79	21	36	37	13	7	0	1	1	2	10	1	4	23	36	36	8	38	29
11B-T1-9_contig.fa_viral_35	13	92	166	24	6	48	305	560	16	3	0	10	1	0	0	4	2	1	150	490	239	138	127	40
11B-T1-9_contig.fa_viral_36	37	118	124	62	19	67	108	129	30	2	0	5	12	11	3	7	5	4	44	51	37	36	92	75
11B-T1-9_contig.fa_viral_37	13	45	74	34	31	48	21	34	16	26	17	12	12	10	8	21	12	7	43	19	20	19	40	19
11B-T1-9_contig.fa_viral_38	8	23	127	0	5	23	3	28	0	0	0	0	0	0	0	0	0	0	4	1	0	19	8	8
11B-T1-9_contig.fa_viral_39	12	74	270	27	16	91	15	106	0	0	0	0	0	0	0	0	0	0	105	48	15	72	31	21
11B-T1-9_contig.fa_viral_40	4	36	123	4	2	17	10	31	0	0	0	0	0	0	0	0	0	0	23	4	1	23	14	16
11B-T1-9_contig.fa_viral_41	5	69	127	51	33	75	28	45	6	0	0	0	8	3	1	0	0	1	18	37	15	40	43	66
11B-T1-9_contig.fa_viral_42	5	33	72	26	5	16	9	43	4	0	2	0	2	0	0	1	2	1	35	17	5	13	16	19
8-T1-3_contig.fa_provirus_1	1	0	2	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	1	0
8-T1-3_contig.fa_viral_1	91	214	199	153	22	199	203	264	44	5	4	10	6	2	0	13	1	4	78	114	46	152	354	183
8-T1-3_contig.fa_viral_2	5	16	7	65	8	49	37	19	79	36	5	5	0	0	0	78	12	36	14	5	13	31	45	15
8-T1-3_contig.fa_viral_4	1	24	85	86	12	14	11	11	3	1	1	1	3	2	1	3	1	0	7	3	3	13	6	23
8-T1-3_contig.fa_viral_5	5	15	3	66	8	16	8	2	0	0	1	3	2	1	0	0	0	2	4	0	0	20	53	55
8-T1-3_contig.fa_viral_6	496	459	185	378	133	220	163	152	93	263	280	384	185	193	110	364	692	491	244	109	103	226	671	394
8-T1-3_contig.fa_viral_7	0	0	0	55	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-3_contig.fa_viral_8	78	81	96	102	5	33	240	176	24	4	7	7	0	0	2	42	69	42	91	77	42	73	273	79
8-T1-3_contig.fa_viral_9	5	22	158	118	7	25	7	7	3	1	0	0	1	0	1	0	0	0	10	10	4	34	24	32
8-T1-6_contig.fa_viral_1	0	0	0	0	67	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-6_contig.fa_viral_2	0	0	12	0	85	18	0	1	1	0	0	0	10	1	1	0	0	0	6	1	0	0	4	0
8-T1-6_contig.fa_viral_3	0	2	2	0	77	1	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	1	1	2
8-T1-6_contig.fa_viral_4	1	4	37	15	144	106	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	4
8-T1-6_contig.fa_viral_5	111	132	134	131	562	296	66	71	68	77	115	199	191	115	109	156	376	182	155	81	50	75	266	154
8-T1-6_contig.fa_viral_6	0	10	22	5	77	71	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	3
8-T1-6_contig.fa_viral_7	3	2	5	6	107	15	12	5	19	8	17	7	1	7	5	10	1	6	4	12	5	4	5	4
8-T1-6_contig.fa_viral_8	1	1	4	1	86	11	1	0	0	0	0	0	4	39	0	0	0	0	0	0	0	1	2	0
8-T1-6_contig.fa_viral_9	0	0	0	0	114	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8-T1-6_contig.fa_viral_10	0	1	0	1	57	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
8-T1-6_contig.fa_viral_11	1	4	7	0	99	31	0	0	1	0	0	0	13	8	2	0	0	0	4	3	1	0	1	2
RP-T1-3_contig.fa_viral_561	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	183	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_562	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	97	0	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_563	0	1	0	1	0	1	2	0	3	9	23	16	0	0	0	62	24	10	3	0	0	2	1	0
RP-T1-3_contig.fa_viral_564	0	0	0	0	0	0	0	0	0	43	18	27	0	0	0	131	0	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_565	2	9	5	13	2	7	31	32	51	99	44	64	0	0	0	231	23	93	17	38	65	28	22	8
RP-T1-3_contig.fa_viral_567	5	4	0	2	3	0	0	2	1	4	11	27	2	2	4	106	237	162	8	0	0	2	6	1
RP-T1-3_contig.fa_viral_568	0	0	0	5	0	0	4	1	2	35	46	23	0	0	0	239	51	32	5	1	12	5	2	1
RP-T1-3_contig.fa_viral_569	0	0	0	0	0	1	3	0	1	28	6	13	0	0	0	132	7	56	0	0	0	1	1	0
RP-T1-3_contig.fa_viral_570	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	224	4	23	1	0	1	0	0	1
RP-T1-3_contig.fa_viral_571	0	0	0	0	0	0	0	0	0	0	13	18	0	0	0	108	25	20	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_572	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	100	18	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_573	0	0	0	0	0	0	0	0	1	10	6	4	0	0	0	111	0	24	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_574	2	2	1	0	0	0	1	1	0	0	1	2	0	1	1	80	0	1	0	0	0	1	2	1
RP-T1-3_contig.fa_viral_575	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	147	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_576	0	1	0	1	0	0	1	1	4	7	4	5	0	0	0	150	6	19	0	1	1	0	1	0
RP-T1-3_contig.fa_viral_577	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	13	23	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_578	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	68	0	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_579	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	90	3	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_580	3	2	1	6	2	9	2	5	9	28	19	11	2	7	2	260	7	50	2	6	6	1	5	4
RP-T1-3_contig.fa_viral_581	6	2	5	3	4	1	4	1	0	21	34	50	1	1	0	252	84	26	5	2	0	1	5	1
RP-T1-3_contig.fa_viral_582	31	81	80	48	25	42	56	73	14	4	6	7	4	6	4	203	316	192	7	15	10	39	126	59
RP-T1-3_contig.fa_viral_583	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	92	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_584	1	0	0	1	0	0	5	1	3	20	4	2	0	0	0	142	3	32	1	1	5	1	4	2
RP-T1-3_contig.fa_viral_585	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	178	0	24	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_586	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	69	0	0	0	2	0	0	0	0
Ex45-T1-3_contig.fa_viral_41	3	9	2	15	6	6	122	80	16	0	1	3	0	0	0	5	0	3	41	58	148	97	117	33
Ex45-T1-3_contig.fa_viral_42	150	191	163	216	118	204	381	325	238	241	254	182	85	74	99	359	98	119	259	425	595	366	416	220
Ex45-T1-3_contig.fa_viral_43	1	2	3	14	7	9	112	51	16	1	2	2	0	0	0	1	0	1	15	48	107	72	74	21
Ex45-T1-3_contig.fa_viral_44	597	588	431	543	302	521	449	461	485	665	797	906	373	271	265	1134	1185	801	605	700	681	557	1067	562
Ex45-T1-3_contig.fa_viral_45	167	39	12	74	7	42	81	37	56	45	16	23	4	1	2	35	78	58	52	9	18	31	197	85
Ex45-T1-3_contig.fa_viral_46	0	0	0	0	0	0	106	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_176	0	0	0	0	0	0	0	0	0	0	191	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_177	0	0	0	0	0	0	0	0	0	0	165	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_178	0	0	0	0	0	0	0	0	0	0	103	0	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_179	0	0	0	0	0	0	0	0	0	0	136	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_180	1	3	2	4	4	4	11	15	94	14	155	0	0	0	0	6	0	0	0	6	1	8	5	5
HP-T1-6_contig.fa_viral_181	0	0	0	0	0	0	0	0	0	0	139	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_182	0	0	0	0	0	0	0	0	0	0	90	6	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_183	0	0	0	0	0	0	0	0	0	0	103	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_184	0	0	0	0	0	0	0	0	0	41	85	71	0	0	0	145	0	2	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_185	0	0	0	0	0	0	0	0	0	0	234	0	0	0	0	0	0	0	0	0	0	0	1	0
HP-T1-6_contig.fa_viral_186	0	0	0	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_187	6	10	7	5	4	5	10	13	6	6	127	12	1	3	4	14	7	3	14	26	26	8	11	9
HP-T1-6_contig.fa_viral_188	0	0	0	0	0	0	0	0	0	2	18185	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_189	3	1	3	5	3	8	4	9	4	7	264	59	2	1	1	10	3	1	2	5	5	1	11	3
HP-T1-6_contig.fa_viral_190	0	1	1	2	1	28	2	4	9	0	82	0	0	0	0	0	0	0	0	5	1	4	5	4
HP-T1-6_contig.fa_viral_191	0	0	0	0	0	0	0	0	0	0	75	0	0	0	0	0	0	0	1	0	0	0	0	0
HP-T1-6_contig.fa_viral_192	0	0	0	0	0	0	0	0	0	0	66	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_193	0	0	0	0	0	0	0	0	0	0	140	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_194	0	0	0	0	1	0	0	0	0	2	1250	990	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_195	1	0	0	0	0	0	0	0	0	2	266	4	0	0	0	1	7	2	2	0	0	0	1	0
HP-T1-6_contig.fa_viral_196	1	2	2	3	1	0	1	1	0	2	221	30	0	0	1	4	5	8	3	3	2	0	5	0
HP-T1-6_contig.fa_viral_197	0	0	0	0	0	0	0	0	0	0	61	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_198	0	0	0	0	0	0	0	0	0	0	508	4	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_199	0	0	0	0	0	0	0	0	0	0	99	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_200	0	0	0	0	0	0	0	0	0	0	246	38	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_201	0	0	0	0	0	0	0	0	0	0	76	4	1	0	0	3	1	0	2	1	0	0	0	0
HP-T1-6_contig.fa_viral_202	0	0	0	0	0	0	0	0	0	1	223	8	0	0	0	1	1	0	0	0	0	0	2	1
HP-T1-6_contig.fa_viral_203	2	11	0	0	4	2	5	14	67	9	94	0	0	0	0	0	0	0	0	1	1	4	1	2
HP-T1-6_contig.fa_viral_204	4	5	5	0	13	3	3	3	1	2	112	1	0	1	5	0	2	1	1	4	0	5	5	2
HP-T1-6_contig.fa_viral_205	0	0	0	0	0	2	0	2	0	1	79	0	0	0	0	0	0	0	0	1	1	0	0	1
HP-T1-6_contig.fa_viral_206	0	0	0	0	0	0	0	0	0	8	172	56	0	0	0	2	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_207	29	10	2	12	3	5	3	1	1	289	983	1417	0	1	3	980	2710	1152	3	3	0	4	24	20
HP-T1-6_contig.fa_viral_208	11	14	8	12	13	15	17	19	11	41	122	49	5	3	7	27	1	7	11	13	11	7	24	9
HP-T1-6_contig.fa_viral_209	0	0	0	0	0	0	0	0	0	0	172	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_210	0	0	0	1	0	0	0	3	0	0	431	7	0	0	0	0	0	0	12	4	3	0	9	0
HP-T1-6_contig.fa_viral_211	0	0	0	0	0	0	4	1	30	121	137	10	0	0	0	163	0	16	1	1	2	1	1	0
HP-T1-6_contig.fa_viral_212	11	14	7	5	1	11	12	11	2	22	108	79	0	0	1	10	9	6	4	7	8	9	19	10
HP-T1-6_contig.fa_viral_213	1	0	0	0	0	0	1	4	3	0	37082	73	0	0	0	2	1	0	52	38	40	0	1	38
HP-T1-6_contig.fa_viral_214	0	0	0	0	0	0	0	0	0	0	146	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_215	0	0	0	1	0	1	0	0	0	0	166	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_216	0	0	0	0	1	0	0	0	0	0	240	4	0	0	1	2	0	2	0	0	0	0	0	1
HP-T1-6_contig.fa_viral_217	2	4	2	5	0	7	2	4	10	32	77	56	0	0	0	125	7	10	2	14	14	5	5	2
HP-T1-6_contig.fa_viral_218	0	0	0	0	0	0	0	0	0	0	299	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_219	0	1	0	2	0	1	1	1	1	66	116	76	0	0	0	385	15	14	1	1	1	1	1	1
HP-T1-6_contig.fa_viral_220	0	0	0	0	0	0	0	0	0	0	114	0	0	0	0	0	0	0	0	0	0	0	1	0
HP-T1-6_contig.fa_viral_221	0	0	0	0	0	0	0	0	0	0	81	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_222	0	0	0	0	0	0	0	0	5	45	100	7	0	0	0	68	0	0	0	0	0	0	1	0
HP-T1-6_contig.fa_viral_223	0	0	0	0	0	0	0	0	0	55	117	6	0	0	0	89	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_224	0	0	0	0	0	0	0	0	0	0	418	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_225	0	0	0	0	0	0	0	0	0	0	149	84	0	0	0	3	0	0	1	0	0	0	0	0
HP-T1-6_contig.fa_viral_226	0	0	0	0	0	0	1	0	0	0	312	1	0	0	0	0	0	0	1	0	0	0	0	0
HP-T1-6_contig.fa_viral_227	0	0	0	0	0	0	0	0	0	0	837	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_228	2	8	2	5	1	5	4	29	17	5	73839	175	3	1	0	5	0	3	253	148	140	4	12	107
HP-T1-6_contig.fa_viral_229	0	0	0	0	0	0	0	0	0	0	116	34	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_230	0	0	0	0	0	0	0	0	0	1	107	75	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_231	6	1	0	0	0	2	1	1	1	2	190	8	0	0	0	1	1	4	5	0	1	0	1	1
HP-T1-6_contig.fa_viral_232	0	0	0	0	0	0	0	0	0	0	878	2	0	0	0	0	0	0	2	1	1	0	0	0
HP-T1-6_contig.fa_viral_233	0	0	0	0	0	0	0	0	0	0	121	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_234	0	0	0	0	0	0	0	0	0	0	68	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_235	0	0	0	0	0	0	0	0	0	0	134	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_236	0	0	0	0	0	0	0	0	0	0	729	568	0	0	1	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_237	8	16	13	11	11	13	5	9	14	25	147	34	4	4	6	48	30	20	22	12	8	5	20	14
HP-T1-6_contig.fa_viral_238	0	0	0	0	0	0	0	0	0	0	3064	5	0	0	0	0	0	0	2	2	2	0	0	0
HP-T1-6_contig.fa_viral_239	0	0	0	0	0	0	0	0	0	0	69	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_240	0	0	0	0	0	0	0	0	0	20	140	4	0	0	0	83	1	8	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_241	0	0	0	0	0	0	0	0	0	0	102	0	0	0	1	4	0	2	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_242	0	0	0	2	0	0	0	0	1	0	5112	7	0	0	0	0	0	0	16	18	16	0	0	16
HP-T1-6_contig.fa_viral_243	0	0	4	2	1	1	3	5	9	0	39944	91	1	0	0	1	1	0	90	63	67	3	5	42
HP-T1-6_contig.fa_viral_244	0	0	0	0	0	0	0	0	0	0	1003	4	0	0	0	0	0	0	4	1	0	0	0	0
HP-T1-6_contig.fa_viral_245	0	4	4	2	0	4	3	5	6	11	77	2	0	1	1	9	0	0	4	3	4	3	2	1
HP-T1-6_contig.fa_viral_246	0	0	0	3	4	4	7	3	20	29	91	40	0	0	0	79	0	26	1	3	17	2	1	0
HP-T1-6_contig.fa_viral_247	0	0	0	0	0	0	0	0	0	0	126	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_248	0	3	4	0	0	2	0	7	2	6	106	189	0	0	0	10	0	0	0	17	14	6	2	2
HP-T1-6_contig.fa_viral_249	0	0	0	0	0	0	0	0	0	0	1639	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_250	0	0	0	0	0	0	0	0	0	0	483	1	0	0	0	0	4	3	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_251	307	313	172	236	135	222	178	155	203	243	297	366	213	174	116	368	749	415	278	183	122	193	561	266
HP-T1-6_contig.fa_viral_252	1	5	0	0	3	10	6	5	13	4	103	0	0	0	4	5	0	2	3	4	4	2	6	4
HP-T1-6_contig.fa_viral_253	0	0	0	0	0	0	0	0	0	0	208	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_254	0	1	0	0	0	3	0	0	2	0	194	5	0	0	0	7	1	1	0	0	1	0	1	0
HP-T1-6_contig.fa_viral_255	0	0	0	0	1	0	2	0	2	188	141	163	0	0	0	567	33	29	0	4	4	1	0	0
HP-T1-6_contig.fa_viral_256	0	0	0	0	0	0	0	0	0	0	150	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_257	132	199	110	127	99	209	74	102	127	129	589	1651	82	57	91	224	262	123	138	127	109	109	257	149
HP-T1-6_contig.fa_viral_258	2	0	0	0	0	3	0	0	1	1	111	5	0	2	1	3	1	1	2	0	0	0	3	1
HP-T1-6_contig.fa_viral_259	0	0	0	0	0	3	0	0	0	0	49	0	0	0	0	0	0	0	1	0	0	0	1	0
HP-T1-6_contig.fa_viral_260	0	0	0	0	0	0	0	0	0	0	394	0	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_261	0	0	0	0	0	0	0	0	0	0	76	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_262	0	0	0	0	0	0	0	0	0	0	599	3	0	0	0	0	0	0	0	0	0	0	0	1
HP-T1-6_contig.fa_viral_263	0	0	0	0	0	0	0	0	0	0	145	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_264	0	0	0	1	0	1	0	0	8	61	104	4	0	0	0	40	0	4	0	0	0	0	1	0
HP-T1-6_contig.fa_viral_265	0	0	0	0	0	0	0	0	0	0	159	0	0	0	0	1	2	1	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_266	0	1	0	0	0	0	0	0	0	0	571	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_267	0	0	0	0	0	0	0	0	0	10	80	58	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_268	0	0	0	0	0	0	0	0	0	0	81	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_269	2	3	2	8	2	8	5	5	21	42	61	25	0	1	1	61	9	14	9	7	13	6	7	5
SC-T1-3_contig.fa_viral_256	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	77	0	0	0	0	0
SC-T1-3_contig.fa_viral_257	2	9	11	1	5	5	2	13	0	0	0	0	2	4	2	0	0	0	182	21	19	8	8	2
SC-T1-3_contig.fa_viral_258	40	22	9	19	5	14	39	18	4	0	1	2	11	7	3	2	3	1	148	73	38	21	90	24
SC-T1-3_contig.fa_viral_259	0	1	12	0	23	13	1	4	0	0	0	0	1	0	0	0	0	0	70	7	6	4	2	0
SC-T1-3_contig.fa_viral_260	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	90	0	0	0	0	0
SC-T1-3_contig.fa_viral_261	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	93	2	0	0	0	2
SC-T1-3_contig.fa_viral_262	5	10	40	7	41	33	18	28	4	3	1	0	35	11	7	1	2	0	419	50	14	13	8	5
SC-T1-3_contig.fa_viral_264	0	2	9	2	15	5	1	0	0	1	0	0	6	9	7	4	0	0	73	0	0	1	0	2
SC-T1-3_contig.fa_viral_265	5	20	43	0	4	4	7	45	0	0	0	0	1	3	1	0	2	1	78	9	12	20	7	3
SC-T1-3_contig.fa_viral_266	4	12	4	4	3	28	8	8	8	1	2	0	0	0	0	0	2	0	112	20	15	10	16	10
SC-T1-3_contig.fa_viral_267	4	56	197	22	7	47	20	71	0	0	0	0	0	0	0	0	0	0	114	47	16	60	29	22
SC-T1-3_contig.fa_viral_268	0	0	7	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	193	2	0	0	0	0
SC-T1-3_contig.fa_viral_269	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	236	0	0	0	0	0
SC-T1-3_contig.fa_viral_270	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	134	0	0	0	0	0
SC-T1-3_contig.fa_viral_271	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	117	0	0	0	0	0
SC-T1-3_contig.fa_viral_272	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1154	0	0	0	0	0
SC-T1-3_contig.fa_viral_273	139	185	138	171	111	193	131	120	163	195	198	217	133	118	175	540	147	159	266	277	340	141	291	157
SC-T1-3_contig.fa_viral_275	1	69	219	12	8	41	68	266	0	0	0	0	45	27	8	1	0	0	83	70	21	85	89	81
SC-T1-3_contig.fa_viral_276	0	0	1	1	1	0	0	0	4	0	3	0	0	1	0	0	0	0	78	1	0	2	0	0
SC-T1-3_contig.fa_viral_277	1	5	34	6	0	10	29	34	0	0	0	0	0	0	0	0	0	0	164	79	27	20	12	8
SC-T1-3_contig.fa_viral_278	10	88	285	13	16	91	28	94	0	0	0	0	0	0	0	0	0	0	147	68	23	49	33	30
SC-T1-3_contig.fa_viral_279	0	2	3	0	0	2	19	35	1	2	0	1	1	1	0	5	4	2	228	144	123	5	3	6
SC-T1-3_contig.fa_viral_281	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	201	0	0	0	0	0
SC-T1-3_contig.fa_viral_282	1	12	21	0	6	12	5	28	5	5	2	0	4	2	2	1	0	0	117	11	7	8	3	7
SC-T1-3_contig.fa_viral_283	1	3	0	5	0	2	0	2	1	1	0	0	0	1	0	7	8	5	89	3	0	1	2	4
SC-T1-3_contig.fa_viral_285	35	73	52	72	42	63	59	74	111	164	105	109	24	25	40	393	65	87	181	107	153	69	78	51
SC-T1-3_contig.fa_viral_286	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	0	20	0	0	0
SC-T1-3_contig.fa_viral_287	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	93	0	0	0	0	2
SC-T1-3_contig.fa_viral_288	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	140	0	0	0	0	0
SC-T1-3_contig.fa_viral_289	9	10	12	6	20	5	3	3	3	21	0	0	18	19	17	0	4	3	96	0	3	2	4	2
SC-T1-3_contig.fa_viral_290	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	146	0	0	0	0	0
SC-T1-3_contig.fa_viral_291	0	2	14	1	2	4	4	10	0	0	0	0	1	0	0	0	0	0	69	7	0	2	4	3
SC-T1-3_contig.fa_viral_292	46	152	234	52	15	59	114	181	5	1	0	0	0	1	0	1	0	0	150	202	63	73	205	144
SC-T1-3_contig.fa_viral_293	18	61	83	28	10	41	137	237	37	4	12	20	8	4	6	10	21	5	253	315	335	47	92	53
SC-T1-3_contig.fa_viral_294	35	69	71	49	15	64	143	169	40	10	6	6	9	3	0	8	9	15	247	313	114	56	105	52
SC-T1-3_contig.fa_viral_295	0	6	3	3	2	10	1	5	5	0	3	1	0	0	0	3	0	0	116	20	13	0	2	4
SC-T1-3_contig.fa_viral_296	0	1	8	3	5	2	1	9	1	0	0	1	1	3	4	0	0	0	147	4	5	5	9	5
SC-T1-6_contig.fa_provirus_1	0	0	0	1	2	3	1	3	1	0	0	0	0	0	0	0	0	0	0	80	0	2	2	0
SC-T1-6_contig.fa_provirus_2	0	4	2	0	0	0	11	11	0	0	0	0	0	0	0	0	0	0	31	28	20	2	0	3
SC-T1-6_contig.fa_provirus_4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	129	0	0	0	0
SC-T1-6_contig.fa_viral_1	2	9	7	6	2	6	10	13	11	3	3	1	0	1	2	16	2	1	8	68	55	5	9	8
SC-T1-6_contig.fa_viral_2	0	0	0	0	1	1	7	1	1	0	0	2	0	0	0	0	0	0	5	59	59	2	0	0
SC-T1-6_contig.fa_viral_3	1	0	0	0	0	0	0	5	3	0	0	1	0	0	0	0	0	0	0	42	43	2	1	0
Ex45-T1-6_contig.fa_viral_77	157	238	200	187	123	244	181	273	126	160	226	163	55	70	72	184	69	84	175	171	173	209	288	195
Ex45-T1-6_contig.fa_viral_78	0	0	0	0	0	0	1	80	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_79	24	95	129	71	22	64	68	113	23	9	9	22	25	21	7	12	15	14	88	166	83	55	117	59
Ex45-T1-6_contig.fa_viral_80	0	5	6	0	0	0	5	67	1	1	1	0	1	0	0	2	0	3	0	0	2	11	14	1
Ex45-T1-6_contig.fa_viral_81	11	106	370	42	33	136	32	140	29	10	10	1	2	1	0	16	0	5	134	57	33	103	62	75
Ex45-T1-6_contig.fa_viral_82	1	37	133	20	11	34	15	70	6	8	6	3	14	12	7	9	8	6	56	27	15	22	35	26
Ex45-T1-6_contig.fa_viral_83	93	85	76	54	4	28	140	149	14	8	11	33	1	0	0	60	101	67	104	102	44	69	155	45
Ex45-T1-6_contig.fa_viral_84	45	168	148	63	11	95	100	130	15	2	0	3	13	5	1	5	2	2	45	43	19	79	163	88
Ex45-T1-6_contig.fa_viral_85	37	153	230	33	7	31	99	185	5	1	0	1	7	3	6	0	0	6	49	72	12	94	153	113
Ex45-T1-6_contig.fa_viral_86	12	135	322	91	61	261	108	193	81	11	10	4	26	53	22	5	4	6	135	147	51	86	123	97
Ex45-T1-6_contig.fa_viral_90	4	22	16	14	9	14	20	82	3	3	0	1	0	1	0	1	0	0	3	2	3	32	24	12
Ex45-T1-6_contig.fa_viral_91	12	60	90	21	3	41	54	87	16	1	2	0	2	5	3	0	0	0	27	35	11	23	26	19
Ex45-T1-6_contig.fa_viral_93	23	149	201	58	14	91	117	174	61	0	0	0	2	5	0	0	0	0	6	46	7	59	82	61
Ex45-T1-6_contig.fa_viral_94	0	1	2	0	0	1	0	81	2	2	1	0	0	0	0	1	0	1	4	12	26	7	8	1
Ex45-T1-6_contig.fa_viral_95	19	55	60	76	79	109	30	78	28	12	13	7	96	236	29	26	7	5	14	24	9	49	166	59
Ex45-T1-6_contig.fa_viral_96	0	0	0	0	2	14	7	81	5	0	0	0	0	0	0	0	0	0	0	1	2	2	3	3
Ex45-T1-6_contig.fa_viral_97	13	19	12	2	1	4	45	153	5	0	2	1	0	0	0	1	0	0	8	73	109	81	71	64
Ex45-T1-6_contig.fa_viral_99	0	0	0	0	0	0	0	127	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	1
Ex45-T1-6_contig.fa_viral_100	3	23	16	10	8	15	46	96	3	2	0	1	0	3	0	0	1	3	6	2	5	37	16	19
Ex45-T1-6_contig.fa_viral_101	0	2	3	1	0	13	11	79	8	0	0	0	0	2	0	0	0	1	7	38	19	4	12	9
Ex45-T1-6_contig.fa_viral_102	0	0	0	0	0	0	0	99	1	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0
Ex45-T1-6_contig.fa_viral_103	0	0	0	0	0	0	0	93	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_104	28	112	242	69	29	73	108	169	0	0	0	0	0	0	0	0	0	0	43	77	17	95	221	147
Ex45-T1-6_contig.fa_viral_105	21	46	34	26	33	38	41	91	13	9	6	3	35	27	29	5	6	1	49	15	20	45	47	39
Ex45-T1-6_contig.fa_viral_106	0	0	0	0	0	4	3	82	1	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0
Ex45-T1-6_contig.fa_viral_107	14	110	120	46	16	27	19	112	10	3	3	0	11	5	2	45	2	6	74	129	30	36	101	51
Ex45-T1-6_contig.fa_viral_108	31	129	214	58	22	60	161	188	21	0	1	1	0	2	2	4	6	3	154	131	62	90	219	172
Ex45-T1-6_contig.fa_viral_109	11	20	16	25	18	84	30	128	36	17	13	7	10	6	7	40	3	12	9	26	18	11	27	24
Ex45-T1-6_contig.fa_viral_110	10	38	155	30	17	25	31	286	1	0	0	0	31	13	4	0	0	1	66	10	1	35	81	58
Ex45-T1-6_contig.fa_viral_111	2	3	17	4	0	2	9	75	0	2	0	0	0	0	0	0	0	0	6	4	0	25	20	14
Ex45-T1-6_contig.fa_viral_112	0	0	0	0	1	0	0	223	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_113	5	84	254	21	16	96	32	124	0	0	0	0	0	0	0	0	0	0	95	47	22	58	50	40
Ex45-T1-6_contig.fa_viral_114	0	0	0	0	0	0	2	157	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_115	10	62	90	32	8	28	59	128	16	11	15	23	9	2	6	14	10	11	31	27	23	56	62	29
Ex45-T1-6_contig.fa_viral_117	27	81	80	65	22	171	179	187	12	3	0	1	15	13	7	3	0	1	98	460	274	79	103	71
Ex45-T1-6_contig.fa_viral_118	7	5	4	16	16	45	14	53	11	2	16	7	0	1	0	3	3	4	11	23	16	15	42	23
Ex45-T1-6_contig.fa_viral_119	1	2	4	1	1	4	1	98	0	0	0	0	0	0	1	0	0	1	2	5	6	4	15	2
Ex45-T1-6_contig.fa_viral_120	2	8	16	1	1	5	17	110	18	5	3	3	0	0	0	15	0	10	24	24	19	19	11	15
Ex45-T1-6_contig.fa_viral_122	1	6	15	2	0	3	20	91	0	4	1	0	0	0	0	10	4	1	5	4	10	14	30	17
Ex45-T1-6_contig.fa_viral_123	40	75	76	57	4	50	106	128	9	3	1	7	0	0	0	6	9	1	71	106	32	31	73	37
Ex45-T1-6_contig.fa_viral_124	14	43	54	15	7	21	39	65	0	0	0	0	0	0	0	0	0	0	24	30	6	16	56	41
Ex45-T1-6_contig.fa_viral_125	13	42	47	25	22	19	60	101	5	9	6	5	1	0	3	4	1	2	15	9	9	36	32	19
Ex45-T1-9_contig.fa_provirus_1	0	1	0	3	0	0	4	1	13	4	0	0	0	0	0	3	1	2	0	0	2	1	1	1
Ex45-T1-9_contig.fa_provirus_2	0	0	0	0	0	0	2	0	86	103	26	7	0	0	0	332	4	54	1	4	3	0	1	1
Ex45-T1-9_contig.fa_provirus_3	0	0	0	8	0	4	4	2	68	4	7	6	0	0	0	0	0	1	1	8	21	1	2	0
Ex45-T1-9_contig.fa_viral_1	0	2	0	3	3	0	0	0	134	2	3	1	0	1	0	0	0	0	0	1	0	2	0	0
Ex45-T1-9_contig.fa_viral_2	2	4	5	9	0	6	8	6	88	1	14	4	0	0	0	0	0	0	1	13	15	8	1	0
Ex45-T1-9_contig.fa_viral_3	5	27	7	74	8	25	217	114	97	45	23	24	0	0	0	114	6	53	75	117	227	142	150	35
Ex45-T1-9_contig.fa_viral_4	0	0	0	2	0	3	2	2	117	119	16	8	0	0	0	459	0	71	0	2	2	1	3	0
Ex45-T1-9_contig.fa_viral_5	0	1	1	1	1	2	2	2	150	167	36	8	0	0	0	507	1	116	0	0	2	0	0	0
Ex45-T1-9_contig.fa_viral_6	0	0	0	4	1	6	11	4	110	4	0	0	0	0	0	0	0	0	0	5	29	2	1	0
Ex45-T1-9_contig.fa_viral_7	0	0	0	0	0	0	0	0	125	132	15	6	0	0	0	399	4	83	0	2	4	0	1	0
Ex45-T1-9_contig.fa_viral_8	0	0	0	1	0	4	0	0	81	9	3	0	0	0	0	0	0	0	0	0	0	2	0	0
Ex45-T1-9_contig.fa_viral_9	42	47	50	29	0	13	80	60	75	40	25	74	0	0	0	126	185	141	31	34	31	24	82	28
Ex45-T1-9_contig.fa_viral_10	0	0	0	0	0	2	0	0	204	39	6	0	0	0	0	0	0	2	0	0	0	0	0	0
Ex45-T1-9_contig.fa_viral_11	0	2	1	5	1	8	4	4	126	8	5	3	0	0	0	4	0	2	1	13	19	1	0	0
Ex45-T1-9_contig.fa_viral_12	0	1	0	1	2	2	2	0	143	62	12	0	0	0	0	2	1	2	0	4	5	2	1	0
UAB-T1-6_contig.fa_viral_6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	89	0
UAB-T1-6_contig.fa_viral_7	37	46	15	25	18	41	29	36	13	9	12	12	3	2	3	10	5	10	20	21	14	36	131	49
UAB-T1-6_contig.fa_viral_8	8	4	3	16	1	3	4	4	0	0	1	1	0	2	0	1	3	1	0	0	3	6	142	60
UAB-T1-6_contig.fa_viral_9	6	11	1	17	1	5	8	7	2	4	5	6	0	0	0	2	8	0	8	2	3	12	122	51
UAB-T1-6_contig.fa_viral_10	8	38	25	28	11	37	10	9	0	0	0	0	11	3	2	0	0	0	0	11	1	4	90	34
UAB-T1-6_contig.fa_viral_11	46	30	13	17	5	29	27	32	16	13	6	10	3	4	0	19	18	7	45	42	30	40	95	29
UAB-T1-6_contig.fa_viral_12	20	17	1	17	4	9	10	8	3	2	3	4	0	0	0	3	9	4	11	4	2	6	64	20
UAB-T1-6_contig.fa_viral_13	99	47	13	51	8	24	28	33	20	10	16	18	2	7	2	21	39	17	34	16	13	27	125	70
UAB-T1-6_contig.fa_viral_14	15	6	7	14	7	14	19	19	10	79	8	17	10	9	8	44	21	19	16	23	11	9	372	73
UAB-T1-6_contig.fa_viral_15	16	21	23	13	3	13	16	35	0	0	1	0	7	0	1	0	0	2	19	19	3	47	96	73
UAB-T1-6_contig.fa_viral_16	66	38	21	60	12	23	24	11	10	15	16	32	2	11	2	24	56	40	29	19	14	25	158	83
UAB-T1-6_contig.fa_viral_17	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	2	2	3	0	387	0
UAB-T1-6_contig.fa_viral_18	0	12	17	25	5	19	26	20	3	1	0	0	1	2	0	1	0	1	3	7	3	29	88	30
UAB-T1-6_contig.fa_viral_19	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	6	2	2	2	0	1	3	97	17
UAB-T1-6_contig.fa_viral_20	186	65	3	88	17	63	76	32	35	27	17	21	3	3	5	24	35	29	64	15	17	52	237	126
UAB-T1-6_contig.fa_viral_21	17	14	4	29	3	15	26	30	2	5	10	4	6	12	2	7	16	12	7	4	3	18	322	113
UAB-T1-6_contig.fa_viral_22	0	18	25	9	35	55	10	10	13	2	0	0	0	1	0	0	0	0	2	11	8	26	53	20
UAB-T1-6_contig.fa_viral_23	1	7	0	5	2	11	6	4	3	2	0	0	0	6	8	6	2	2	2	2	2	0	131	87
UAB-T1-6_contig.fa_viral_24	20	5	0	13	7	4	1	0	2	0	0	0	1	0	0	0	2	0	0	2	1	6	116	60
UAB-T1-6_contig.fa_viral_25	80	38	6	55	3	25	46	16	31	30	39	31	1	2	0	41	64	36	40	29	20	31	108	54
UAB-T1-6_contig.fa_viral_26	6	14	16	15	1	15	26	38	17	1	3	2	1	2	3	11	8	4	18	9	24	32	85	54
UAB-T1-6_contig.fa_viral_28	23	36	23	42	20	47	57	50	17	3	6	3	9	12	2	14	11	7	5	7	5	31	144	55
UAB-T1-6_contig.fa_viral_29	10	63	55	32	2	61	47	85	3	1	0	1	1	0	0	0	2	0	49	30	29	40	123	86
UAB-T1-6_contig.fa_viral_30	2	9	5	6	0	0	8	4	0	0	0	0	2	2	0	0	0	0	0	4	0	0	135	6
UAB-T1-6_contig.fa_viral_31	1	0	0	0	0	1	0	0	1	3	4	0	1	1	0	0	0	1	0	1	0	0	73	3
UAB-T1-6_contig.fa_viral_33	2	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	263	0
UAB-T1-6_contig.fa_viral_34	135	74	6	70	7	35	62	58	42	42	21	34	0	0	0	36	95	55	58	21	17	32	174	81
UAB-T1-6_contig.fa_viral_35	140	119	71	116	66	80	117	90	61	96	119	140	64	43	49	197	248	131	80	74	47	100	431	162
SC-T1-6_contig.fa_viral_204	8	34	49	11	12	16	24	81	8	0	0	2	11	4	1	1	3	3	30	79	22	26	25	15
SC-T1-6_contig.fa_viral_205	16	17	9	7	5	11	15	22	5	5	4	4	7	8	3	1	1	4	26	96	69	18	23	10
SC-T1-6_contig.fa_viral_206	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	73	41	0	0	0
SC-T1-6_contig.fa_viral_207	10	61	78	20	16	66	34	49	32	7	1	4	20	19	34	4	2	6	29	117	42	23	30	18
SC-T1-6_contig.fa_viral_208	7	9	18	14	4	15	12	17	7	6	112	328	1	10	0	13	12	9	7	117	98	15	34	35
SC-T1-6_contig.fa_viral_209	0	1	1	1	2	3	6	6	5	6	2	3	0	0	0	5	0	5	7	82	82	2	3	4
SC-T1-6_contig.fa_viral_210	0	0	0	4	1	5	42	29	7	2	3	2	0	0	0	11	0	4	9	169	319	17	7	3
SC-T1-6_contig.fa_viral_211	0	0	0	0	0	0	2	1	0	2	2	0	0	0	0	0	0	0	3	88	87	3	1	3
SC-T1-6_contig.fa_viral_212	1	1	5	1	0	7	1	5	3	0	3	0	0	0	0	1	0	3	2	72	2	3	2	5
SC-T1-6_contig.fa_viral_213	1	0	1	1	1	3	6	10	1	0	0	0	2	0	0	0	0	0	21	69	9	1	3	2
SC-T1-6_contig.fa_viral_214	2	1	0	1	0	2	4	8	1	1	1	1	0	0	0	38	6	1	47	69	80	6	5	2
SC-T1-6_contig.fa_viral_215	1	7	5	20	14	63	8	19	12	1	5	0	0	0	0	0	0	0	14	113	50	16	54	23
SC-T1-6_contig.fa_viral_216	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	431	127	0	0	0
SC-T1-6_contig.fa_viral_217	0	6	2	0	6	17	4	10	14	2	3	0	0	0	1	2	0	0	5	119	4	4	22	6
SC-T1-6_contig.fa_viral_218	14	9	3	5	0	4	20	39	2	2	3	4	0	0	0	0	2	1	64	159	109	7	18	5
SC-T1-6_contig.fa_viral_219	1	12	7	8	2	5	23	24	14	1	4	4	2	1	3	0	1	0	13	121	87	34	26	14
SC-T1-6_contig.fa_viral_220	6	47	88	44	19	66	64	93	17	1	0	0	34	24	15	2	1	8	167	301	109	23	41	19
SC-T1-6_contig.fa_viral_221	23	137	257	79	34	70	110	165	2	1	0	0	1	0	0	0	0	2	73	115	29	86	171	154
SC-T1-6_contig.fa_viral_222	1	5	2	2	4	22	7	16	4	0	0	0	0	0	0	0	0	0	4	339	24	8	7	9
SC-T1-6_contig.fa_viral_223	14	6	6	10	2	9	14	24	21	22	51	26	3	5	6	71	24	22	39	112	74	22	37	24
SC-T1-6_contig.fa_viral_224	5	6	4	10	5	7	7	10	12	38	32	15	2	1	7	55	9	16	8	94	12	7	24	13
SC-T1-6_contig.fa_viral_225	1	0	1	2	0	3	4	3	6	0	0	4	0	0	0	3	0	0	4	78	44	5	3	3
SC-T1-6_contig.fa_viral_226	0	8	7	7	8	32	6	11	9	1	4	0	0	0	0	0	0	0	16	152	27	11	40	13
SC-T1-6_contig.fa_viral_227	254	282	255	217	30	122	466	387	130	117	43	196	5	11	3	371	832	336	327	253	162	230	700	217
SC-T1-6_contig.fa_viral_228	1	2	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	8	75	66	3	0	0
SC-T1-6_contig.fa_viral_229	0	5	6	11	14	47	10	9	17	7	2	2	0	0	0	5	0	5	26	79	24	17	26	27
SC-T1-6_contig.fa_viral_231	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	75	0	0	0	0
SC-T1-6_contig.fa_viral_232	0	1	1	3	2	39	5	7	0	0	1	0	0	0	1	3	0	0	3	129	17	9	39	12
SC-T1-6_contig.fa_viral_233	70	67	66	77	43	84	100	93	111	116	165	157	64	36	39	181	64	84	95	299	274	135	137	93
SC-T1-6_contig.fa_viral_234	1	0	3	2	0	2	1	1	0	0	1	0	0	0	0	0	0	0	5	101	3	0	1	0
SC-T1-6_contig.fa_viral_235	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	4	89	0	0	3	2
SC-T1-6_contig.fa_viral_236	29	66	54	61	46	194	57	104	80	42	50	22	10	17	16	85	25	40	66	256	105	61	146	112
SC-T1-6_contig.fa_viral_237	8	14	18	46	5	23	171	84	64	17	10	15	0	0	0	36	2	10	64	97	185	96	119	39
SC-T1-6_contig.fa_viral_238	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	71	0	0	0	0
SC-T1-6_contig.fa_viral_239	0	1	1	0	0	4	3	9	1	0	0	0	0	0	0	0	0	0	7	143	1	0	2	0
SC-T1-6_contig.fa_viral_240	18	83	134	75	21	68	77	147	23	5	6	5	23	10	5	17	5	14	127	218	94	52	119	68
SC-T1-6_contig.fa_viral_241	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	132	38	0	0	0
SC-T1-6_contig.fa_viral_242	1	9	14	3	0	10	14	34	7	1	1	4	4	3	1	3	1	0	26	122	154	9	10	11
SC-T1-6_contig.fa_viral_243	4	4	15	4	0	7	11	12	13	0	5	7	0	1	0	0	0	0	3	74	57	23	18	4
SC-T1-6_contig.fa_viral_244	4	7	10	6	2	8	25	45	18	22	2	8	0	0	0	100	6	23	118	126	199	18	14	13
SC-T1-6_contig.fa_viral_245	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	318	145	23	0	0	0
SC-T1-6_contig.fa_viral_246	0	0	0	0	1	3	1	2	0	0	0	0	0	0	0	0	0	0	0	276	0	0	0	0
SC-T1-6_contig.fa_viral_247	1	2	2	2	7	32	3	4	11	1	0	0	0	0	0	0	0	0	6	92	8	2	9	2
SC-T1-6_contig.fa_viral_248	0	0	0	0	0	0	1	5	1	0	2	0	0	0	0	0	0	0	0	110	63	0	0	0
SC-T1-6_contig.fa_viral_249	1	2	5	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	11	121	0	0	0	0
SC-T1-6_contig.fa_viral_250	1	0	0	0	0	1	1	2	0	0	0	0	0	0	2	0	1	0	4	257	124	0	2	0
SC-T1-6_contig.fa_viral_251	31	110	187	56	26	58	58	96	0	0	0	0	0	0	1	0	0	0	63	93	12	70	153	123
SC-T1-6_contig.fa_viral_252	1	0	5	1	1	0	2	2	1	3	4	0	0	0	0	1	0	2	10	107	1	0	2	0
SC-T1-6_contig.fa_viral_253	2	2	1	5	1	2	4	3	4	3	0	1	0	0	0	3	0	1	98	125	171	0	1	3
SC-T1-6_contig.fa_viral_254	10	33	26	8	3	23	176	147	1	0	1	0	8	9	0	0	0	0	311	416	96	36	60	17
SC-T1-6_contig.fa_viral_255	0	0	1	2	0	0	1	8	6	0	8	12	0	0	0	2	0	0	3	68	48	13	7	5
SC-T1-6_contig.fa_viral_256	0	1	2	0	0	3	14	38	0	0	0	0	0	0	0	0	0	0	61	108	92	5	8	1
SC-T1-6_contig.fa_viral_257	0	9	14	2	0	2	5	9	0	0	0	0	17	8	2	0	0	0	28	60	22	6	18	7
SC-T1-6_contig.fa_viral_258	12	42	73	18	22	81	60	84	26	5	0	1	12	9	2	4	1	2	105	128	22	28	47	33
SC-T1-6_contig.fa_viral_259	0	8	2	8	18	70	33	34	21	3	7	0	0	0	0	1	0	0	12	125	38	34	47	36
SC-T1-6_contig.fa_viral_260	2	8	10	11	3	37	12	10	9	3	1	0	0	0	0	10	0	3	9	112	13	23	40	20
SC-T1-6_contig.fa_viral_261	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	76	0	0	0	1
SC-T1-6_contig.fa_viral_262	2	21	14	15	9	62	15	16	31	5	6	6	4	4	0	27	6	10	34	142	57	15	57	29
SC-T1-6_contig.fa_viral_263	0	0	0	0	1	5	2	0	2	0	0	0	0	0	2	0	0	0	2	221	2	0	1	3
SC-T1-6_contig.fa_viral_264	217	287	209	215	109	195	298	256	119	154	133	197	68	87	76	251	419	244	271	171	129	177	546	231
SC-T1-6_contig.fa_viral_265	3	1	6	1	1	4	9	8	3	7	10	5	0	0	0	19	1	2	24	59	166	3	5	4
SC-T1-6_contig.fa_viral_266	36	63	71	64	29	85	120	144	91	113	54	102	24	20	34	318	23	74	135	296	455	104	98	69
SC-T1-6_contig.fa_viral_267	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	5	174	0	0	2	0
SC-T1-6_contig.fa_viral_268	0	0	0	0	0	3	8	11	3	2	1	1	0	0	0	9	0	1	3	133	237	7	3	3
SC-T1-6_contig.fa_viral_269	0	1	0	2	2	1	18	5	7	3	10	5	0	0	1	15	1	8	8	122	176	2	4	2
SC-T1-6_contig.fa_viral_270	4	6	5	3	3	5	28	5	5	4	4	6	1	1	1	1	4	0	13	147	250	6	8	4
SC-T1-6_contig.fa_viral_271	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	83	1	1	1	0
SC-T1-6_contig.fa_viral_272	0	1	0	0	2	1	4	7	12	5	3	1	0	0	0	20	0	6	1	109	196	13	6	0
SC-T1-6_contig.fa_viral_273	5	4	1	2	0	2	32	60	0	1	0	1	0	0	2	0	0	0	62	140	94	12	9	3
SC-T1-6_contig.fa_viral_274	0	2	2	3	2	10	44	48	0	0	0	0	0	0	0	0	0	0	6	300	177	28	5	2
SC-T1-6_contig.fa_viral_275	0	0	1	0	1	3	2	2	0	0	0	0	0	0	0	0	0	0	1	123	4	0	0	0
SC-T1-9_contig.fa_provirus_1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	5	0	0	0
SC-T1-6_contig.fa_viral_36	0	1	0	1	1	9	1	4	3	0	0	0	0	0	0	0	0	0	0	213	0	0	0	2
SC-T1-6_contig.fa_viral_37	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	9	123	0	0	1	0
SC-T1-6_contig.fa_viral_38	24	37	31	14	16	28	29	45	25	8	7	13	4	5	2	42	37	19	166	139	84	20	61	35
SC-T1-6_contig.fa_viral_39	2	5	1	2	5	18	49	38	30	10	12	6	0	0	0	19	0	9	1	341	531	45	25	2
SC-T1-6_contig.fa_viral_40	0	0	0	1	0	6	8	8	3	3	0	0	0	0	0	3	0	3	116	102	196	4	4	0
SC-T1-6_contig.fa_viral_41	0	1	0	2	4	2	7	17	9	0	1	2	0	0	0	1	0	0	4	112	170	8	10	2
SC-T1-6_contig.fa_viral_42	3	9	15	13	26	100	13	32	21	5	6	1	0	2	1	3	1	3	18	78	32	28	45	24
SC-T1-6_contig.fa_viral_43	0	2	5	3	3	27	3	9	5	0	0	0	0	0	0	0	0	0	2	248	9	5	5	8
SC-T1-6_contig.fa_viral_44	1	2	2	0	2	2	0	1	0	0	0	0	0	0	0	0	0	0	12	149	4	0	0	0
SC-T1-6_contig.fa_viral_45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	58	72	88	0	0	0
SC-T1-6_contig.fa_viral_46	0	1	0	1	0	2	13	14	6	0	0	2	0	0	0	0	0	0	1	182	250	8	6	1
SC-T1-6_contig.fa_viral_47	1	7	14	13	5	13	1	7	0	0	0	2	38	17	1	0	2	0	40	220	29	6	16	16
SC-T1-6_contig.fa_viral_48	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	59	1	0	0	0
SC-T1-6_contig.fa_viral_49	1	5	3	6	2	3	16	36	22	27	41	64	0	0	0	102	9	13	37	115	185	13	8	4
SC-T1-6_contig.fa_viral_50	14	74	150	37	12	21	61	102	8	1	2	1	10	9	2	11	4	5	252	365	98	29	53	29
SC-T1-6_contig.fa_viral_51	6	20	11	60	4	28	164	76	61	20	5	8	0	0	0	41	0	13	42	121	181	107	103	37
SC-T1-6_contig.fa_viral_52	4	11	11	15	1	32	61	96	2	4	3	2	2	2	1	4	1	3	176	193	53	21	34	19
SC-T1-6_contig.fa_viral_53	0	2	2	1	0	0	7	11	1	0	0	0	0	0	0	1	0	0	2	190	117	2	3	0
SC-T1-6_contig.fa_viral_54	3	33	59	39	8	12	40	54	0	0	0	1	0	1	0	0	0	0	54	68	27	36	29	35
SC-T1-6_contig.fa_viral_55	0	0	1	0	0	2	9	0	0	0	0	0	0	0	0	0	0	0	13	127	20	2	1	0
SC-T1-6_contig.fa_viral_56	132	181	145	157	89	208	132	195	168	183	258	213	78	48	106	276	100	99	230	371	331	175	226	146
SC-T1-6_contig.fa_viral_57	4	16	3	28	6	12	142	89	50	43	17	15	0	0	0	160	1	52	34	113	144	83	116	30
SC-T1-6_contig.fa_viral_58	0	1	1	1	1	1	2	2	15	1	4	9	0	0	0	9	0	2	8	82	98	0	2	2
SC-T1-6_contig.fa_viral_59	9	17	10	28	0	14	90	69	36	30	7	3	0	0	0	87	4	42	44	84	121	70	72	38
SC-T1-6_contig.fa_viral_60	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	7	315	211	0	0	0
SC-T1-6_contig.fa_viral_61	1	9	7	2	0	3	40	65	0	0	0	0	0	0	0	0	0	0	120	199	127	15	8	9
SC-T1-6_contig.fa_viral_62	27	102	212	82	23	57	111	142	0	0	0	0	0	0	0	0	0	0	52	101	15	92	172	172
SC-T1-6_contig.fa_viral_63	1	7	15	2	1	6	5	13	0	0	0	0	0	0	0	5	1	0	10	128	73	3	7	7
SC-T1-6_contig.fa_viral_64	9	15	43	23	13	20	36	21	3	0	0	0	4	1	2	2	1	4	23	159	95	7	12	11
SC-T1-6_contig.fa_viral_65	2	0	0	0	0	0	0	1	1	0	0	2	0	0	0	2	3	0	12	68	43	0	1	2
SC-T1-6_contig.fa_viral_66	7	7	2	8	4	6	51	40	10	10	17	10	0	1	0	26	23	9	54	145	74	11	20	7
SC-T1-6_contig.fa_viral_67	17	24	26	10	3	24	40	56	9	2	1	0	1	1	0	2	3	2	139	140	61	21	17	14
SC-T1-6_contig.fa_viral_68	2	7	10	6	7	26	65	67	1	0	2	2	6	2	32	3	0	2	294	335	115	12	11	3
SC-T1-6_contig.fa_viral_69	0	3	9	3	15	37	1	1	2	0	0	0	0	1	0	0	0	0	1	105	2	0	4	1
SC-T1-6_contig.fa_viral_70	15	17	13	70	8	35	252	153	62	1	6	8	0	0	0	12	1	2	68	145	289	163	159	61
SC-T1-6_contig.fa_viral_71	0	3	5	2	2	14	5	3	7	0	2	0	0	1	0	0	0	0	12	140	2	4	5	2
SC-T1-6_contig.fa_viral_72	4	2	2	0	0	0	21	29	0	0	0	0	0	0	0	0	0	0	38	74	50	8	4	4
SC-T1-6_contig.fa_viral_73	108	116	72	92	12	33	216	121	40	67	38	121	10	3	0	170	326	157	106	91	39	91	302	102
SC-T1-6_contig.fa_viral_75	3	5	1	23	3	11	53	62	18	2	1	1	0	0	0	2	0	0	28	67	81	57	49	25
SC-T1-6_contig.fa_viral_76	8	31	23	18	15	22	28	33	3	1	1	2	11	12	9	6	2	2	33	155	80	15	25	16
SC-T1-6_contig.fa_viral_77	8	15	12	80	6	21	253	128	83	12	10	15	0	2	2	40	5	12	50	147	265	180	190	57
SC-T1-6_contig.fa_viral_78	2	23	40	14	2	10	5	24	4	0	1	1	4	0	1	0	0	0	36	164	71	16	22	13
SC-T1-6_contig.fa_viral_79	4	38	19	35	36	136	48	44	75	10	14	1	0	1	0	53	4	18	43	148	59	50	93	56
SC-T1-6_contig.fa_viral_80	15	44	21	34	33	151	36	69	81	5	11	0	0	1	0	0	0	5	37	148	44	45	90	62
SC-T1-6_contig.fa_viral_81	0	4	5	6	0	6	14	17	15	1	4	7	0	0	0	0	1	3	9	109	67	17	14	10
SC-T1-6_contig.fa_viral_82	0	18	6	65	9	31	185	94	46	4	7	10	0	0	0	24	3	8	43	96	194	139	142	39
SC-T1-6_contig.fa_viral_83	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	119	0	0	0	0
SC-T1-6_contig.fa_viral_84	0	9	23	12	3	11	33	39	0	0	0	0	8	6	1	0	0	0	57	136	29	16	11	6
SC-T1-6_contig.fa_viral_85	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	118	83	0	0	0
SC-T1-6_contig.fa_viral_86	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	177	0	2	2	0
SC-T1-6_contig.fa_viral_87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	121	0	0	4	0
SC-T1-6_contig.fa_viral_88	0	5	1	1	3	19	5	5	3	0	0	0	0	0	0	0	0	0	5	158	4	1	3	0
SC-T1-6_contig.fa_viral_89	1	3	2	3	1	26	8	11	11	0	5	0	0	0	0	3	0	0	7	99	8	6	18	16
SC-T1-6_contig.fa_viral_90	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	99	0	0	0	0
SC-T1-6_contig.fa_viral_91	11	32	23	27	29	76	21	33	26	12	6	5	11	7	8	25	3	7	47	99	25	35	56	29
SC-T1-6_contig.fa_viral_92	0	0	4	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	6	64	0	0	0	0
SC-T1-6_contig.fa_viral_93	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	692	0	0	1	1
SC-T1-6_contig.fa_viral_94	3	9	2	24	2	16	61	46	20	18	13	15	0	0	0	33	1	9	23	103	188	55	39	13
SC-T1-6_contig.fa_viral_95	12	36	15	19	5	14	69	48	19	3	11	17	8	8	5	18	20	3	76	84	40	15	45	17
SC-T1-6_contig.fa_viral_96	0	0	2	0	0	3	2	0	2	0	0	0	0	0	0	0	0	0	2	130	0	1	2	0
SC-T1-6_contig.fa_viral_97	4	7	10	5	5	2	104	137	2	0	0	1	0	2	0	2	1	0	102	294	252	16	15	6
SC-T1-6_contig.fa_viral_98	0	3	6	1	4	5	2	1	0	1	0	0	6	1	4	1	2	3	3	72	80	1	5	1
SC-T1-6_contig.fa_viral_99	0	7	2	0	0	0	53	54	0	0	0	0	0	0	0	0	0	0	76	164	126	14	11	4
SC-T1-6_contig.fa_viral_100	20	144	260	63	32	79	91	216	25	4	5	2	20	14	4	18	2	9	135	156	60	65	117	66
SC-T1-6_contig.fa_viral_101	9	29	39	9	2	22	48	60	10	3	0	0	3	4	2	0	1	2	111	183	65	31	38	35
SC-T1-6_contig.fa_viral_102	1	7	7	3	8	11	11	13	0	1	0	0	4	3	1	1	0	0	65	130	27	3	19	7
RP-T1-6_contig.fa_viral_358	0	1	0	2	0	0	0	1	0	2	0	0	0	0	0	1	56	5	2	0	0	0	5	5
RP-T1-6_contig.fa_viral_359	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	101	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_360	57	19	12	27	7	49	33	29	36	80	44	41	1	1	0	46	172	79	55	10	25	19	81	42
RP-T1-6_contig.fa_viral_361	53	6	2	10	2	5	9	2	17	44	16	21	0	0	0	30	127	60	16	1	6	5	17	7
RP-T1-6_contig.fa_viral_362	159	84	34	61	35	58	32	27	55	87	97	101	47	43	57	129	301	122	66	44	32	26	138	76
RP-T1-6_contig.fa_viral_363	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	79	176	123	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_365	1	0	0	0	0	0	0	0	4	10	64	74	0	0	0	59	128	41	2	0	8	0	0	0
RP-T1-6_contig.fa_viral_366	3	0	0	2	1	0	1	0	0	12	0	13	0	0	0	20	66	48	1	1	0	0	10	6
RP-T1-6_contig.fa_viral_367	0	0	0	0	0	0	0	0	0	1	3	6	0	0	0	120	217	68	2	0	0	0	0	1
RP-T1-6_contig.fa_viral_368	137	128	66	137	33	78	110	81	79	91	97	164	66	58	17	245	527	254	139	78	64	63	291	131
RP-T1-6_contig.fa_viral_369	5	1	1	5	0	0	5	4	2	27	38	169	2	3	0	148	394	145	12	5	2	2	17	7
RP-T1-6_contig.fa_viral_370	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	167	22	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_373	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	203	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_374	6	5	4	7	4	7	4	3	15	67	56	30	4	3	1	182	175	56	8	11	3	5	6	4
RP-T1-6_contig.fa_viral_375	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	101	6	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_376	9	14	4	11	1	2	12	4	4	2	8	21	4	2	0	20	93	27	10	0	1	3	56	28
RP-T1-6_contig.fa_viral_377	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	132	6	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_378	3	4	1	9	3	7	3	2	4	9	21	51	3	3	2	59	219	69	10	8	7	10	15	15
RP-T1-6_contig.fa_viral_379	11	8	4	5	1	6	4	4	5	16	17	25	4	7	3	67	394	178	11	18	4	4	36	18
RP-T1-6_contig.fa_viral_380	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	59	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_381	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	110	33	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_382	8	4	0	1	0	2	0	1	0	5	6	5	0	0	0	25	126	1	1	1	1	0	1	1
RP-T1-6_contig.fa_viral_383	15	6	7	13	7	8	9	8	9	10	17	35	9	4	10	108	418	239	14	13	7	6	27	18
RP-T1-6_contig.fa_viral_384	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	229	59	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_385	13	4	2	8	1	4	4	4	5	16	8	4	0	0	0	11	78	8	12	1	6	2	7	8
RP-T1-6_contig.fa_viral_386	21	6	2	9	2	2	16	9	2	22	150	188	1	0	1	138	394	141	26	2	7	5	31	16
RP-T1-6_contig.fa_viral_387	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	4	544	7	0	1	0	1	0	0
RP-T1-6_contig.fa_viral_388	4	3	0	1	2	3	1	0	0	0	3	25	0	0	0	72	336	154	2	0	3	1	2	1
RP-T1-6_contig.fa_viral_389	68	22	2	32	8	12	5	3	8	20	25	130	0	7	0	430	276	84	45	8	2	5	21	10
RP-T1-6_contig.fa_viral_390	0	0	0	0	0	0	0	0	0	0	0	13	0	0	0	15	67	8	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_391	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	75	23	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_393	0	0	0	0	0	0	0	0	0	0	7	1	0	0	0	31	102	38	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_394	27	16	8	4	10	7	9	1	2	15	12	8	4	3	4	148	134	37	9	6	2	4	13	4
RP-T1-6_contig.fa_viral_395	6	1	4	2	2	5	2	1	1	5	2	4	2	0	0	8	80	20	1	0	2	1	4	2
RP-T1-3_contig.fa_viral_341	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	377	189	125	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_342	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	33	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_343	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	288	63	16	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_344	0	0	0	0	0	0	1	1	1	3	1	4	0	0	0	94	0	20	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_345	81	107	50	76	34	56	61	68	45	127	112	205	32	31	36	379	225	164	101	93	78	61	175	124
RP-T1-3_contig.fa_viral_346	0	4	6	3	1	3	10	8	29	33	9	6	1	0	0	429	10	132	4	3	5	0	2	6
RP-T1-3_contig.fa_viral_347	3	1	0	3	0	1	0	1	2	0	4	4	0	0	0	130	0	22	2	0	0	0	0	1
RP-T1-3_contig.fa_viral_348	0	0	0	0	0	0	0	0	0	6	8	17	0	0	0	247	27	41	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_349	0	0	0	0	0	0	0	0	0	6	13	10	0	0	0	128	32	17	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_350	7	14	10	26	6	23	23	16	87	90	10	4	0	0	0	126	25	148	26	23	46	15	22	10
RP-T1-3_contig.fa_viral_351	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	509	4	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_352	0	0	3	1	0	2	9	14	6	74	165	299	0	0	0	145	1	65	9	6	18	15	10	4
RP-T1-3_contig.fa_viral_353	0	0	0	1	0	1	0	0	0	157	17	3	0	0	0	185	0	31	0	0	1	1	0	1
RP-T1-3_contig.fa_viral_354	0	0	0	0	0	0	0	0	0	125	3	4	0	0	0	151	2	16	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_355	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	227	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_356	1	3	1	1	0	6	2	3	9	10	2	7	0	0	0	174	31	30	2	9	17	2	5	3
RP-T1-3_contig.fa_viral_357	0	1	1	0	0	0	1	0	0	45	19	4	0	2	0	99	0	24	4	2	7	1	1	1
RP-T1-3_contig.fa_viral_358	22	26	13	13	1	14	25	14	17	24	22	39	1	1	0	87	76	29	18	27	17	18	51	30
RP-T1-3_contig.fa_viral_359	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	160	75	19	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_360	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	679	341	78	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_361	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	67	11	14	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_363	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	176	1	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_364	0	0	0	0	0	1	0	0	24	71	83	8	0	0	0	141	0	22	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_365	2	16	11	7	6	17	9	14	6	9	22	37	1	0	3	75	3	14	4	20	16	10	6	8
RP-T1-3_contig.fa_viral_366	1	1	4	3	0	0	0	3	2	1	0	15	0	0	0	83	2	1	1	1	0	0	2	5
RP-T1-3_contig.fa_viral_367	0	0	0	0	0	0	0	0	1	80	112	9	0	0	0	113	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_368	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	105	23	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_369	2	0	0	0	0	0	0	0	0	63	21	11	0	0	0	69	6	5	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_370	0	0	3	2	0	1	3	3	0	16	3	3	0	0	0	113	43	14	8	1	3	1	0	1
RP-T1-3_contig.fa_viral_371	15	36	17	57	11	54	38	65	241	173	70	90	0	0	0	567	97	249	82	103	176	67	68	22
RP-T1-3_contig.fa_viral_372	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	149	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_373	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	473	233	172	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_374	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	388	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_375	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	125	358	196	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_376	1	0	0	0	0	0	0	2	1	4	0	0	0	0	0	123	12	4	0	5	7	0	0	0
RP-T1-3_contig.fa_viral_377	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	73	0	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_378	0	0	0	0	1	0	0	0	7	15	15	9	0	0	0	122	0	9	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_379	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	830	1	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_380	0	0	0	0	0	0	0	0	6	14	30	14	0	0	0	132	0	14	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_381	1	0	0	0	2	0	0	1	1	0	2	0	0	0	0	167	1	4	0	0	0	0	0	2
RP-T1-3_contig.fa_viral_382	0	0	0	0	0	0	0	0	0	0	11	2	0	0	0	112	27	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_383	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	167	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_384	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	392	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_385	0	0	0	0	0	0	0	0	0	3	1	4	0	0	0	84	25	23	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_386	2	4	6	17	0	9	68	41	43	82	31	30	0	0	0	285	11	101	16	56	65	37	39	12
RP-T1-3_contig.fa_viral_387	0	0	0	0	0	0	3	3	0	10	6	0	0	0	0	63	0	13	0	1	6	2	1	1
RP-T1-3_contig.fa_viral_388	1	1	0	1	1	2	1	2	1	2	4	3	0	1	0	71	17	23	0	1	0	2	2	1
RP-T1-3_contig.fa_viral_389	3	32	59	16	3	22	18	52	44	54	21	27	7	4	1	953	19	135	24	28	16	25	21	9
RP-T1-3_contig.fa_viral_390	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	216	0	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_391	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_392	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	131	39	0	0	0	0	0	2	0
RP-T1-3_contig.fa_viral_393	9	6	6	1	2	9	3	3	0	57	15	27	8	5	3	260	5	10	9	7	5	4	8	6
RP-T1-3_contig.fa_viral_394	2	2	0	0	0	1	0	0	1	0	0	0	0	0	0	73	0	5	2	0	0	0	2	0
RP-T1-3_contig.fa_viral_395	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	198	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_396	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	76	74	21	1	0	0	0	1	0
RP-T1-3_contig.fa_viral_397	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	98	0	0	1	3	1	0	2	0
RP-T1-3_contig.fa_viral_398	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	185	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_399	1	7	1	6	2	6	43	26	20	37	4	15	0	0	0	196	7	66	7	22	25	22	18	8
RP-T1-3_contig.fa_viral_400	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	66	2	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_401	24	98	90	79	46	96	61	107	87	129	69	52	33	14	49	458	76	68	110	158	156	111	117	76
RP-T1-3_contig.fa_viral_402	3	41	82	11	6	23	32	54	28	10	3	2	2	5	2	190	3	33	29	51	21	20	30	23
RP-T1-3_contig.fa_viral_403	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_404	40	10	8	2	3	6	12	13	20	17	22	60	0	1	0	1411	12	5	8	10	7	7	20	21
RP-T1-3_contig.fa_viral_405	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	15	23	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_406	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	95	0	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_407	12	3	3	3	6	4	2	2	6	16	8	12	4	4	0	70	35	17	5	4	3	2	4	10
RP-T1-3_contig.fa_viral_408	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	131	52	33	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_409	0	0	0	0	0	0	0	0	0	7	6	0	0	0	0	142	1	19	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_410	0	1	1	4	1	3	4	4	19	39	14	32	0	0	0	187	9	28	2	2	9	1	2	3
RP-T1-3_contig.fa_viral_411	0	1	2	2	0	6	0	1	12	24	11	3	0	0	0	152	0	21	0	0	0	1	1	1
RP-T1-3_contig.fa_viral_412	0	0	0	0	0	0	1	0	0	4	3	4	0	0	0	72	8	14	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_413	7	6	4	5	1	2	2	2	4	7	11	5	2	2	2	100	8	7	4	0	3	1	4	3
RP-T1-3_contig.fa_viral_414	5	34	66	26	9	17	27	56	34	23	14	8	5	5	2	1094	50	158	43	36	12	19	52	34
RP-T1-3_contig.fa_viral_415	106	224	156	175	133	348	145	176	213	166	198	86	54	47	80	265	41	89	216	218	207	184	289	163
RP-T1-3_contig.fa_viral_416	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	164	84	70	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_417	13	13	1	18	4	7	26	8	26	42	19	78	2	0	0	347	682	325	44	7	8	6	52	10
RP-T1-3_contig.fa_viral_418	2	4	0	3	4	14	2	8	17	3	3	0	0	0	0	297	4	41	1	4	7	2	6	4
RP-T1-3_contig.fa_viral_419	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	303	121	79	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_420	4	3	2	6	1	3	17	18	10	11	3	0	0	0	0	466	118	91	7	5	11	10	4	5
RP-T1-3_contig.fa_viral_421	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	172	61	26	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_422	6	6	1	5	6	9	3	4	7	11	11	8	4	5	2	182	36	12	8	2	8	8	6	3
RP-T1-3_contig.fa_viral_423	0	1	0	1	0	2	0	0	8	43	5	2	0	0	0	95	18	80	0	0	0	3	0	1
RP-T1-3_contig.fa_viral_424	0	0	0	0	0	0	0	0	0	3	3	2	0	0	0	88	5	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_425	0	0	1	3	0	1	0	0	12	80	6	4	0	0	0	189	12	130	1	0	0	1	2	2
RP-T1-3_contig.fa_viral_426	0	0	0	0	0	0	0	0	2	6	2	2	0	0	0	674	191	164	0	1	1	0	0	0
RP-T1-3_contig.fa_viral_427	0	0	1	0	0	1	0	1	0	1	0	2	0	1	0	125	20	37	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_428	0	0	0	2	1	2	1	0	3	60	32	84	0	0	0	203	18	18	2	2	7	1	1	0
RP-T1-3_contig.fa_viral_429	0	0	0	0	0	0	0	0	0	10	0	1	0	0	0	422	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_430	1	0	0	9	0	6	4	2	34	106	14	4	0	0	0	262	27	211	4	7	9	4	1	1
RP-T1-3_contig.fa_viral_431	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	70	98	25	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_432	0	0	0	0	0	1	2	0	3	0	0	0	0	0	0	106	28	12	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_433	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	121	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_434	96	92	58	66	36	48	42	40	20	93	66	99	30	32	14	114	158	92	70	40	40	50	125	85
RP-T1-3_contig.fa_viral_435	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	150	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_436	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	161	36	13	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_437	0	0	0	0	0	0	1	0	1	1	2	0	0	0	0	90	2	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_438	0	0	1	1	0	0	0	0	1	0	0	1	2	0	0	1037	102	45	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_439	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	271	3	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_440	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	71	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_441	1	3	2	7	1	8	9	4	20	37	4	25	0	0	0	108	11	76	21	23	35	4	9	3
HP-T1-3_contig.fa_viral_11	16	26	4	6	0	5	2	8	1	159	5	15	3	6	0	10	7	5	8	6	7	10	22	26
HP-T1-3_contig.fa_viral_12	0	0	0	0	0	0	0	0	67	143	23	11	0	0	0	660	0	99	0	0	0	2	0	0
HP-T1-3_contig.fa_viral_14	0	0	0	1	0	0	15	5	22	74	4	11	0	0	0	270	5	84	0	4	6	2	1	0
HP-T1-3_contig.fa_viral_15	0	5	8	13	2	14	24	19	38	72	12	5	0	0	0	64	48	53	15	31	56	7	10	7
HP-T1-3_contig.fa_viral_16	1	0	6	2	0	3	3	1	0	145	2	11	3	2	1	7	6	4	15	5	0	1	11	3
HP-T1-3_contig.fa_viral_17	1	1	0	1	1	2	0	1	1	75	0	0	1	2	0	0	0	0	1	0	0	1	7	4
HP-T1-3_contig.fa_viral_18	0	0	0	0	0	1	0	0	0	70	19	6	0	0	0	42	2	2	1	0	1	0	0	0
HP-T1-3_contig.fa_viral_19	32	7	2	8	16	21	14	10	52	83	39	10	0	0	2	286	16	58	0	10	11	3	9	0
HP-T1-3_contig.fa_viral_21	8	0	0	14	1	5	10	1	15	49	7	23	0	0	0	4	7	3	18	1	0	6	14	16
HP-T1-3_contig.fa_viral_22	47	87	98	96	79	125	75	66	67	242	100	50	58	50	50	119	21	40	75	69	56	80	105	52
HP-T1-3_contig.fa_viral_23	0	0	0	0	0	0	0	0	0	72	9	9	0	0	0	193	21	33	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_24	2	0	0	0	0	0	0	0	3	148	17	6	0	0	0	52	2	3	2	2	0	1	0	0
HP-T1-3_contig.fa_viral_25	0	2	0	1	1	7	0	0	15	66	9	4	0	0	0	117	17	92	0	0	1	3	1	0
HP-T1-3_contig.fa_viral_26	0	0	0	0	1	3	3	2	34	111	30	9	0	0	0	330	2	50	0	5	11	1	0	0
HP-T1-3_contig.fa_viral_27	56	69	36	55	41	61	49	56	80	223	208	276	75	39	21	707	105	114	89	88	130	54	84	51
HP-T1-3_contig.fa_viral_28	1	4	5	2	6	13	8	6	4	89	91	2	4	0	0	2	0	0	7	14	11	19	11	8
HP-T1-3_contig.fa_viral_29	8	16	5	40	9	41	15	25	175	160	13	12	0	0	0	102	25	50	10	43	38	32	25	13
HP-T1-3_contig.fa_viral_30	5	1	1	2	5	3	0	0	2	202	3	5	2	5	4	3	6	5	1	0	2	3	4	3
HP-T1-3_contig.fa_viral_31	0	0	0	0	0	0	1	0	60	179	32	2	0	0	0	510	0	80	0	0	0	0	0	2
HP-T1-3_contig.fa_viral_32	0	0	0	0	0	0	0	0	0	73	1	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_33	0	1	0	0	0	0	0	0	0	120	10	2	0	0	0	79	0	13	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_34	0	0	2	2	0	3	6	1	6	90	16	26	0	0	0	298	4	94	6	2	5	2	1	1
HP-T1-3_contig.fa_viral_35	11	3	1	0	1	4	1	1	15	320	77	39	1	0	0	303	31	31	2	0	0	0	4	0
HP-T1-3_contig.fa_viral_36	0	0	0	0	0	0	0	0	0	159	281	233	0	0	0	91	165	132	3	0	0	0	0	0
HP-T1-3_contig.fa_viral_37	0	8	3	6	4	6	24	17	47	128	32	23	0	0	0	321	3	107	10	24	42	24	13	7
HP-T1-3_contig.fa_viral_38	0	0	0	0	0	0	0	0	0	124	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_39	0	4	1	6	3	8	10	5	79	94	8	6	0	0	0	76	18	65	2	8	18	8	4	1
HP-T1-3_contig.fa_viral_40	0	0	1	0	0	1	0	0	0	96	0	2	0	1	0	1	0	1	1	0	0	0	1	2
HP-T1-3_contig.fa_viral_41	0	0	0	0	1	0	0	0	0	88	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_42	0	0	0	0	0	0	0	0	0	71	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_43	0	1	1	2	1	3	1	1	66	86	4	1	0	0	0	40	10	34	1	1	7	0	0	0
HP-T1-3_contig.fa_viral_44	11	15	19	4	8	14	4	11	5	432	30	7	2	2	6	13	18	2	5	3	4	8	12	11
HP-T1-3_contig.fa_viral_45	76	83	48	53	45	71	39	43	40	156	75	89	47	34	35	192	143	129	79	55	40	52	149	85
HP-T1-3_contig.fa_viral_46	0	0	0	0	0	0	0	0	0	77	0	0	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_47	0	5	1	13	4	20	9	5	98	95	1	2	0	0	0	35	16	32	0	1	1	15	6	6
HP-T1-3_contig.fa_viral_48	2	0	0	0	0	2	0	0	0	88	0	2	0	0	1	1	2	3	1	0	0	1	2	0
HP-T1-3_contig.fa_viral_49	0	0	0	0	0	0	0	0	1	69	88	150	0	0	0	295	6	6	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_50	8	15	6	31	9	47	26	12	202	180	31	34	0	0	1	343	42	216	28	26	46	44	30	14
HP-T1-3_contig.fa_viral_51	0	0	0	0	0	0	0	0	5	102	120	7	0	0	0	92	1	1	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_52	0	0	1	4	1	4	1	3	1	81	5	9	1	4	4	1	1	1	2	3	1	1	3	1
HP-T1-3_contig.fa_viral_53	0	0	0	0	0	0	2	0	17	69	5	12	0	0	0	234	7	71	0	6	1	1	3	2
HP-T1-3_contig.fa_viral_54	2	0	0	4	0	1	15	7	63	90	3	1	0	0	0	11	1	10	3	7	21	5	2	0
HP-T1-3_contig.fa_viral_55	0	2	0	5	0	5	6	4	40	124	32	24	1	0	0	325	12	113	2	9	21	6	5	3
HP-T1-3_contig.fa_viral_56	0	0	0	0	0	0	0	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_57	0	0	3	1	1	1	6	1	69	93	4	5	0	0	0	31	0	9	0	3	0	2	5	2
HP-T1-3_contig.fa_viral_59	0	0	0	0	0	0	1	0	1	83	4	0	0	0	0	75	0	8	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_60	0	4	2	3	2	0	8	4	135	163	36	16	0	0	0	516	2	104	2	5	18	3	3	0
HP-T1-3_contig.fa_viral_61	0	0	0	0	0	0	0	0	0	86	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_62	0	0	0	0	0	1	0	0	13	89	66	38	0	0	0	100	100	58	9	2	4	0	0	0
HP-T1-3_contig.fa_viral_63	1	1	1	1	1	1	0	1	1	70	47	25	0	0	1	168	3	3	0	4	4	2	3	3
HP-T1-3_contig.fa_viral_64	63	54	13	32	16	26	21	19	19	182	48	77	16	14	15	67	147	70	27	11	9	16	126	74
HP-T1-3_contig.fa_viral_65	1	2	0	4	0	2	1	0	47	67	4	0	0	0	0	5	5	8	0	0	2	2	0	1
HP-T1-3_contig.fa_viral_66	117	127	76	120	23	49	184	92	84	127	110	304	33	30	15	322	634	324	140	91	68	58	262	86
HP-T1-3_contig.fa_viral_67	21	43	45	62	35	67	23	37	28	195	174	290	33	16	49	133	51	53	56	69	46	43	52	45
HP-T1-3_contig.fa_viral_68	0	0	1	0	0	0	1	0	0	79	2	0	0	2	0	0	0	1	0	0	2	0	1	1
HP-T1-3_contig.fa_viral_69	0	0	0	0	0	0	0	0	0	96	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_70	2	1	3	2	3	0	2	1	1	72	17	0	0	1	1	4	0	0	0	0	1	5	4	0
HP-T1-3_contig.fa_viral_71	15	7	1	13	2	7	13	5	25	58	31	42	0	0	6	16	43	19	26	7	12	0	23	31
HP-T1-3_contig.fa_viral_72	0	9	4	10	4	8	2	5	9	68	10	17	5	4	1	52	11	20	8	14	1	2	20	3
HP-T1-3_contig.fa_viral_73	0	0	0	3	1	1	0	2	82	82	7	6	0	0	0	50	24	75	0	0	1	3	1	0
HP-T1-3_contig.fa_viral_74	2	0	0	0	1	2	0	2	2	82	3	2	0	1	1	2	0	2	1	0	2	0	1	1
HP-T1-3_contig.fa_viral_75	0	2	0	3	0	2	2	1	11	51	16	4	0	0	0	130	10	14	1	6	13	6	2	0
HP-T1-3_contig.fa_viral_76	2	3	5	1	3	5	1	3	8	212	160	16	1	1	4	50	5	5	5	4	5	10	6	7
HP-T1-3_contig.fa_viral_77	0	0	0	0	0	0	0	0	0	107	8	0	0	0	0	7	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_78	3	2	0	0	0	0	1	1	0	99	39	11	0	0	0	70	8	9	5	1	2	2	0	0
HP-T1-3_contig.fa_viral_79	3	9	3	3	1	5	3	0	2	267	25	1	6	4	1	4	1	3	1	0	0	2	4	3
HP-T1-3_contig.fa_viral_80	22	22	12	25	1	18	13	4	6	172	16	26	7	9	6	15	23	12	21	6	9	17	44	33
HP-T1-3_contig.fa_viral_81	1	1	0	3	0	0	0	1	2	110	85	93	0	0	0	309	24	22	0	0	0	1	0	0
HP-T1-3_contig.fa_viral_83	0	6	3	5	1	7	1	4	3	134	69	12	1	0	1	53	3	2	14	5	5	5	5	7
HP-T1-3_contig.fa_viral_84	1	0	0	0	1	0	1	1	4	62	26	71	0	0	0	197	17	13	0	4	1	2	2	2
HP-T1-3_contig.fa_viral_85	3	15	18	17	6	19	16	18	21	109	44	48	3	4	0	52	4	20	19	30	19	13	40	29
HP-T1-3_contig.fa_viral_86	6	5	8	24	6	19	26	17	83	180	45	18	0	0	0	317	62	383	19	42	63	18	19	12
HP-T1-3_contig.fa_viral_87	0	0	0	3	0	1	5	4	9	62	8	7	0	0	0	150	13	42	3	5	7	6	6	1
HP-T1-3_contig.fa_viral_88	2	5	4	25	3	6	36	17	84	144	29	35	0	0	0	97	10	42	26	17	21	34	20	13
HP-T1-3_contig.fa_viral_89	35	14	7	9	5	15	14	7	19	49	14	29	0	2	2	33	112	39	22	6	6	7	32	13
HP-T1-3_contig.fa_viral_91	1	0	0	2	0	2	1	1	151	250	46	7	0	0	0	911	0	169	0	8	7	4	0	0
HP-T1-3_contig.fa_viral_92	0	1	1	2	0	0	1	1	0	71	8	2	0	0	0	74	2	8	2	3	0	0	1	0
HP-T1-3_contig.fa_viral_93	0	0	0	0	0	0	0	0	0	74	4	2	0	0	0	70	0	14	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_94	0	0	0	0	0	0	0	0	0	134	0	0	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_95	19	26	24	111	5	27	376	191	146	178	35	37	0	0	0	709	17	187	121	283	527	245	203	67
HP-T1-3_contig.fa_viral_96	7	23	4	24	3	32	9	27	143	160	35	10	0	0	0	386	49	296	25	26	23	30	25	11
HP-T1-3_contig.fa_viral_97	2	3	4	2	3	6	3	3	7	162	10	2	4	15	11	10	14	8	6	6	14	4	14	5
HP-T1-3_contig.fa_viral_98	15	10	4	18	2	3	17	8	18	94	27	79	0	0	0	278	496	268	43	11	10	8	37	13
HP-T1-3_contig.fa_viral_99	0	2	0	0	0	0	1	1	0	113	0	0	1	0	0	1	1	0	1	5	0	0	4	1
HP-T1-3_contig.fa_viral_100	3	3	2	9	1	5	7	2	22	80	12	22	0	0	0	48	16	24	12	7	13	10	7	3
HP-T1-3_contig.fa_viral_101	1	0	2	4	2	2	1	1	1	107	3	0	1	2	0	10	4	9	3	2	2	1	0	4
HP-T1-3_contig.fa_viral_103	0	0	0	0	1	3	4	2	9	193	168	158	0	0	0	573	30	56	6	19	37	2	0	1
HP-T1-3_contig.fa_viral_104	0	2	1	7	0	5	0	0	18	108	18	0	1	0	1	183	31	168	0	0	3	1	6	1
HP-T1-3_contig.fa_viral_105	0	0	0	0	0	0	0	0	0	143	2	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-3_contig.fa_viral_106	29	52	43	66	14	71	140	141	214	207	89	120	0	1	0	364	25	178	98	242	361	134	128	65
HP-T1-3_contig.fa_viral_107	0	4	2	12	2	5	42	17	37	120	23	25	0	0	0	340	12	150	6	23	57	26	31	8
HP-T1-3_contig.fa_viral_108	22	30	15	9	14	26	14	18	8	131	17	10	3	8	14	30	9	15	18	33	20	17	27	9
HP-T1-3_contig.fa_viral_109	0	0	0	0	0	1	2	1	0	129	2	0	0	0	0	0	1	0	0	0	0	1	0	0
HP-T1-3_contig.fa_viral_110	2	1	0	0	0	1	0	0	0	80	67	144	0	0	2	40	142	84	2	3	0	0	1	0
RC-T1-3_contig.fa_viral_58	0	0	1	0	0	0	0	2	0	0	0	0	63	76	11	0	0	0	0	0	0	0	0	1
RC-T1-3_contig.fa_viral_59	7	8	6	8	9	1	8	7	4	5	5	25	75	24	7	12	30	21	10	7	4	4	35	21
RC-T1-3_contig.fa_viral_60	3	12	143	7	24	88	21	68	3	2	4	0	244	137	226	1	3	0	570	52	14	41	21	34
RC-T1-3_contig.fa_viral_61	1	4	11	4	1	0	4	7	0	0	0	2	64	8	15	5	0	0	3	2	4	4	8	10
RC-T1-3_contig.fa_viral_62	2	8	53	13	2	9	9	13	0	0	0	0	62	14	2	0	0	2	9	4	2	9	12	8
RC-T1-3_contig.fa_viral_63	0	3	3	17	1	9	0	0	0	0	0	0	95	27	8	0	1	0	0	0	0	2	0	1
RP-T1-3_contig.fa_viral_666	0	0	0	6	1	9	2	5	21	24	63	45	0	0	0	133	0	29	2	5	27	1	1	1
RP-T1-3_contig.fa_viral_667	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	83	29	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_668	0	0	0	0	0	0	0	1	0	12	1	6	0	0	0	184	20	12	3	3	10	0	0	0
RP-T1-3_contig.fa_viral_669	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	90	0	0	6	0	0	0	0	0
RP-T1-3_contig.fa_viral_670	0	0	0	0	0	0	0	0	0	8	3	5	0	0	0	374	135	63	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_671	1	1	1	5	0	1	1	2	19	35	10	5	0	0	0	111	12	66	1	0	3	3	2	4
RP-T1-3_contig.fa_viral_672	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	164	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_673	3	5	1	13	2	2	13	9	12	13	15	8	1	1	0	76	3	14	13	18	26	6	7	3
RP-T1-3_contig.fa_viral_674	8	30	11	18	8	9	18	15	13	17	10	26	14	7	6	95	20	24	27	24	13	8	31	11
RP-T1-3_contig.fa_viral_675	0	0	0	0	0	0	1	0	0	173	43	0	0	0	0	90	1	5	1	3	7	0	0	0
RP-T1-3_contig.fa_viral_676	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	79	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_677	1025	526	146	217	171	307	264	267	124	194	392	523	286	249	250	979	1168	439	408	263	221	176	913	373
RP-T1-3_contig.fa_viral_678	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	286	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_679	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	90	25	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_680	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	71	24	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_681	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	66	15	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_682	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	469	0	0	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_683	0	5	6	4	1	3	10	4	17	4	1	21	0	1	2	105	7	2	3	13	10	4	7	6
RP-T1-3_contig.fa_viral_684	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	232	117	37	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_685	0	0	0	0	0	0	0	0	0	0	22	4	0	0	0	112	30	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_686	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1342	300	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_687	3	13	3	12	4	6	22	23	6	37	54	42	1	0	0	230	5	28	49	47	64	12	11	13
RP-T1-3_contig.fa_viral_688	1	0	0	0	0	0	0	0	60	58	46	34	0	0	0	299	1	34	0	0	1	1	3	0
RP-T1-3_contig.fa_viral_689	0	0	0	0	0	1	0	0	2	18	0	1	0	0	0	70	6	9	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_690	3	3	1	20	0	5	1	5	15	52	7	7	0	0	0	82	11	25	10	18	3	6	5	5
RP-T1-3_contig.fa_viral_691	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	74	0	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_692	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	83	4	1	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_693	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	85	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_694	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	130	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_695	2	9	8	8	4	8	9	8	7	6	8	16	3	2	9	90	0	2	3	7	5	2	7	3
RP-T1-3_contig.fa_viral_696	94	85	43	63	42	41	52	35	43	93	71	135	40	26	15	186	285	121	68	43	38	59	170	73
RP-T1-3_contig.fa_viral_697	2	2	1	2	0	0	0	0	2	6	0	0	0	0	0	85	4	5	2	0	0	0	2	1
RP-T1-3_contig.fa_viral_698	2	2	0	1	0	1	0	2	1	3	1	0	0	0	0	93	5	13	4	1	5	1	1	0
RP-T1-3_contig.fa_viral_699	4	1	1	0	0	1	1	2	2	1	0	3	0	0	0	134	30	25	0	2	0	0	2	2
RP-T1-3_contig.fa_viral_700	0	0	0	0	0	0	0	0	0	5	4	8	0	0	0	104	8	26	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_701	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	244	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_702	9	18	18	14	16	21	10	13	15	30	20	22	4	5	5	77	6	16	13	12	6	18	18	11
RP-T1-3_contig.fa_viral_703	2	1	0	2	1	1	1	0	1	0	0	0	0	0	0	165	0	7	0	1	0	0	1	1
RP-T1-3_contig.fa_viral_704	0	0	0	0	0	0	0	0	1	1	2	1	0	0	0	202	1	0	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_705	15	14	9	7	10	28	17	14	21	14	13	22	3	2	1	333	147	77	16	26	23	14	23	13
RP-T1-3_contig.fa_viral_706	2	4	2	3	0	6	5	6	2	36	45	61	0	0	0	122	5	16	1	11	3	4	2	2
RP-T1-3_contig.fa_viral_707	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	237	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_708	0	0	0	0	0	0	0	0	2	14	12	9	0	0	0	214	15	36	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_709	1	7	6	2	0	8	4	7	2	0	0	0	1	0	1	119	12	11	4	9	4	3	3	4
RP-T1-3_contig.fa_viral_710	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	85	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_711	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	91	10	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_712	0	0	0	0	0	0	0	0	0	4	1	0	0	0	0	142	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_713	0	0	0	0	0	2	1	1	10	155	18	13	1	0	0	651	53	41	0	0	0	1	1	1
RP-T1-3_contig.fa_viral_714	3	3	0	4	1	7	6	3	17	20	12	17	0	0	0	144	4	11	5	4	17	1	6	3
RP-T1-3_contig.fa_viral_715	2	8	1	13	2	10	34	24	43	62	11	10	0	0	0	236	3	83	11	28	48	33	33	12
RP-T1-3_contig.fa_viral_716	0	2	5	9	10	14	12	11	32	136	33	14	0	0	0	286	38	258	8	19	18	11	4	7
RP-T1-3_contig.fa_viral_717	0	0	1	0	0	0	1	3	6	22	35	41	2	1	0	140	0	8	0	7	12	3	0	1
RP-T1-3_contig.fa_viral_718	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	158	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_719	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	237	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_720	4	23	15	31	3	20	79	68	35	47	9	11	0	0	0	125	5	48	21	44	94	80	93	30
RP-T1-3_contig.fa_viral_721	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	86	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_722	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	74	5	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_723	1	1	3	2	2	4	3	2	5	21	37	23	0	0	0	167	40	27	14	20	23	10	2	3
RP-T1-3_contig.fa_viral_724	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	721	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_725	2	4	2	3	0	1	3	0	0	2	1	5	2	3	0	73	47	48	1	2	0	4	12	8
RP-T1-3_contig.fa_viral_726	0	0	1	0	0	0	0	0	0	11	4	0	0	0	0	138	0	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_727	0	0	0	0	1	0	0	0	0	14	4	11	0	0	0	134	9	6	1	0	0	1	1	0
RP-T1-3_contig.fa_viral_728	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	345	109	43	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_729	141	190	155	147	108	179	132	169	146	155	155	110	98	75	95	277	160	173	172	114	100	154	252	143
RP-T1-3_contig.fa_viral_730	0	1	0	0	1	3	0	0	3	0	0	0	0	0	0	140	0	14	0	1	1	1	3	1
RP-T1-3_contig.fa_viral_731	0	4	2	3	1	3	6	1	14	25	4	7	0	0	0	278	12	64	6	6	5	0	2	2
RP-T1-3_contig.fa_viral_732	0	0	0	0	0	0	0	0	1	69	11	36	0	0	0	249	0	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_733	0	0	0	3	0	1	0	2	0	16	29	35	0	0	0	121	7	16	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_734	14	0	0	3	2	3	0	3	1	4	6	7	0	0	0	207	16	1	11	4	3	3	1	5
RP-T1-3_contig.fa_viral_735	0	0	0	0	0	0	0	0	0	9	3	22	0	0	0	91	0	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_736	6	14	4	5	2	8	8	8	12	112	24	11	1	2	1	158	3	17	10	8	26	8	7	7
RP-T1-3_contig.fa_viral_737	1	0	0	0	0	1	0	0	17	96	110	15	0	0	0	137	0	7	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_738	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	154	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_739	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	144	3	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_740	4	28	48	11	4	22	17	23	7	17	7	5	11	5	0	86	5	25	12	13	1	4	11	7
RP-T1-3_contig.fa_viral_741	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	299	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_742	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	109	4	20	0	0	0	0	0	1
RP-T1-3_contig.fa_viral_743	1	2	0	1	0	1	3	2	1	4	5	22	0	0	0	158	63	34	5	3	6	1	0	3
RP-T1-3_contig.fa_viral_744	0	0	0	0	0	0	0	0	10	30	1	2	0	0	0	127	0	29	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_745	6	13	8	16	3	11	8	9	7	11	27	33	1	4	3	233	33	11	6	3	10	6	7	7
RP-T1-3_contig.fa_viral_746	133	45	11	87	13	48	53	42	47	26	12	28	0	1	0	61	86	41	33	18	21	25	201	78
RP-T1-3_contig.fa_viral_747	1	13	8	22	8	22	23	19	91	74	6	5	0	0	0	182	36	157	8	7	11	16	16	8
RP-T1-3_contig.fa_viral_748	9	14	11	9	11	16	11	23	14	18	39	84	1	1	2	334	404	263	14	5	10	15	46	28
RP-T1-3_contig.fa_viral_749	0	1	1	1	0	0	1	2	1	0	0	1	0	0	0	72	17	27	3	2	3	0	1	0
RP-T1-3_contig.fa_viral_750	7	18	11	13	9	25	19	22	23	18	24	14	4	8	5	172	22	35	23	25	40	25	24	16
RP-T1-3_contig.fa_viral_751	8	8	2	10	3	10	6	8	3	11	9	8	8	6	1	89	81	46	11	12	1	5	16	11
RP-T1-3_contig.fa_viral_752	2	0	0	0	0	0	0	0	2	2	3	10	0	0	0	79	13	0	0	0	0	1	1	1
RP-T1-3_contig.fa_viral_753	0	0	0	0	0	0	0	0	0	3	0	9	0	0	0	105	50	21	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_754	0	1	2	1	0	1	1	0	0	79	31	83	0	0	0	536	27	47	4	0	1	3	4	0
RP-T1-3_contig.fa_viral_755	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	246	0	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_756	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	81	0	0	2	0	0	0	0	1
RP-T1-3_contig.fa_viral_757	12	18	4	9	6	27	12	18	17	9	20	15	0	1	3	328	3	14	12	10	17	12	19	15
RP-T1-3_contig.fa_viral_758	0	0	0	0	0	0	0	0	0	2	0	14	0	0	0	90	43	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_759	0	0	0	1	0	1	0	0	0	20	17	3	0	1	1	78	17	12	0	0	0	0	0	0
Ex45-T1-9_contig.fa_viral_49	0	2	7	11	1	14	12	18	157	12	31	4	0	0	0	7	0	4	5	5	88	8	10	3
Ex45-T1-9_contig.fa_viral_50	1	1	1	3	0	2	1	2	115	46	32	6	0	0	0	141	1	38	0	5	6	3	3	0
Ex45-T1-9_contig.fa_viral_51	0	1	0	0	1	0	3	0	96	20	12	3	0	0	0	50	0	12	0	0	1	0	1	0
Ex45-T1-9_contig.fa_viral_52	0	1	0	1	0	2	0	0	159	32	13	0	0	0	0	1	0	7	0	0	0	0	0	1
Ex45-T1-9_contig.fa_viral_53	2	1	3	29	3	18	14	11	91	13	1	1	0	0	0	24	2	7	15	18	24	13	25	9
Ex45-T1-9_contig.fa_viral_54	0	0	0	0	0	0	0	0	96	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_270	1	1	0	0	0	0	0	1	0	0	1	17	1	0	5	57	324	58	6	0	2	0	0	1
RP-T1-6_contig.fa_viral_271	18	6	0	10	4	3	7	5	3	37	15	36	0	0	1	52	220	135	2	0	2	24	10	19
RP-T1-6_contig.fa_viral_272	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	16	84	22	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_273	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	111	27	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_274	0	0	0	0	0	0	1	0	0	4	4	43	0	0	0	19	79	48	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_275	0	0	0	0	0	0	0	0	0	0	2	6	0	0	0	17	79	15	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_276	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_277	56	68	65	62	12	30	59	81	32	26	17	60	2	1	1	149	184	110	91	70	51	42	123	59
RP-T1-6_contig.fa_viral_278	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	115	9	3	0	0	0	0	0
RP-T1-6_contig.fa_viral_279	20	21	16	18	11	9	16	7	9	27	52	42	11	7	4	90	153	50	18	5	11	6	42	23
RP-T1-6_contig.fa_viral_280	211	119	41	101	50	94	72	53	38	113	144	338	49	47	46	189	684	363	112	26	40	72	235	124
RP-T1-6_contig.fa_viral_281	0	0	0	0	0	0	0	0	0	1	3	2	0	0	0	30	49	13	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_282	8	3	3	3	1	4	4	2	0	6	8	38	2	1	1	52	157	63	3	0	2	0	2	3
RP-T1-6_contig.fa_viral_283	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	231	105	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_284	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	128	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_285	28	42	25	22	15	19	20	28	22	56	35	81	20	18	24	249	301	223	46	38	16	19	62	35
RP-T1-6_contig.fa_viral_286	18	11	6	16	2	6	34	13	21	34	54	85	2	3	0	104	225	130	24	9	9	13	47	24
RP-T1-6_contig.fa_viral_287	28	15	6	5	5	13	5	11	12	11	12	8	2	1	1	170	104	54	17	19	12	19	15	12
RP-T1-6_contig.fa_viral_288	6	7	2	4	3	8	3	3	11	25	28	67	3	1	8	31	126	129	7	3	3	5	17	16
RP-T1-6_contig.fa_viral_289	37	20	7	21	15	20	15	16	8	25	37	64	15	12	15	49	147	71	8	13	5	10	38	32
RP-T1-6_contig.fa_viral_290	85	13	3	26	2	21	24	10	34	58	13	38	0	1	0	63	208	98	34	10	9	3	28	20
RP-T1-6_contig.fa_viral_291	3	4	2	2	0	2	6	10	7	11	7	28	0	0	0	40	198	59	4	5	0	1	13	1
RP-T1-6_contig.fa_viral_292	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	209	118	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_293	0	0	1	0	0	1	0	0	0	0	3	1	0	2	0	25	92	20	1	1	1	0	1	0
RP-T1-6_contig.fa_viral_294	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	22	63	24	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_295	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	143	20	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_296	158	93	59	130	39	66	106	69	80	116	119	285	43	37	10	284	505	332	128	54	57	58	325	120
RP-T1-6_contig.fa_viral_297	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	235	22	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_298	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	132	144	18	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_299	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	270	112	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_300	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	65	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_302	10	21	13	15	12	15	13	8	9	52	34	121	23	23	12	80	150	58	17	2	11	10	28	12
RP-T1-6_contig.fa_viral_303	0	1	0	0	0	0	0	2	0	3	0	0	4	0	1	6	301	4	16	0	0	0	0	1
RP-T1-6_contig.fa_viral_304	10	7	2	5	0	2	0	3	1	12	27	48	0	5	7	52	177	117	2	1	2	1	22	7
RP-T1-6_contig.fa_viral_305	1	3	3	1	3	1	1	0	1	3	3	8	1	2	1	27	138	23	4	0	2	0	0	0
RP-T1-6_contig.fa_viral_306	0	0	0	0	1	0	0	1	1	0	0	2	0	1	0	49	90	60	0	0	0	0	0	1
RP-T1-6_contig.fa_viral_307	0	0	0	0	0	0	0	0	0	1	2	7	0	0	0	84	176	40	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_308	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	113	62	1	0	1	0	0	0
RP-T1-6_contig.fa_viral_310	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	165	7	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_311	13	3	0	8	5	8	0	0	3	8	8	9	0	0	0	20	71	14	1	0	0	1	13	8
RP-T1-6_contig.fa_viral_312	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	90	181	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_313	0	0	0	0	0	0	0	0	1	2	0	2	0	0	0	5	208	0	0	0	0	1	0	0
RP-T1-6_contig.fa_viral_314	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	20	105	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_315	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	64	21	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_316	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	133	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_317	5	4	2	4	6	3	0	1	1	4	9	15	1	4	1	12	63	28	0	0	0	1	4	5
RP-T1-6_contig.fa_viral_318	31	18	14	32	13	20	26	12	19	25	33	63	10	4	2	149	282	152	58	21	16	17	69	27
RP-T1-6_contig.fa_viral_319	2	0	1	2	0	1	0	0	0	6	14	41	2	0	0	40	146	95	0	0	0	0	4	2
RP-T1-6_contig.fa_viral_320	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	184	4	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_321	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	152	50	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_322	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	149	89	0	1	0	0	0	1
RP-T1-6_contig.fa_viral_323	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_324	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	17	113	70	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_325	1	0	0	0	0	0	0	0	0	3	3	31	0	0	0	15	118	54	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_326	11	3	0	1	1	0	1	0	0	1	1	1	1	0	0	7	75	44	0	0	0	1	5	3
RP-T1-6_contig.fa_viral_327	62	99	82	78	75	123	43	74	64	178	231	279	122	96	127	302	181	183	142	112	114	55	89	63
RP-T1-6_contig.fa_viral_328	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	114	12	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_329	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	217	75	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_330	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	115	65	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_331	0	0	0	0	0	0	0	0	0	3	6	0	0	0	0	856	292	104	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_332	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	5	170	75	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_333	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	201	67	41	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_334	0	0	0	0	0	0	0	2	14	29	14	15	0	0	0	115	114	60	6	1	1	0	0	1
RP-T1-6_contig.fa_viral_335	4	6	5	5	2	4	4	1	3	24	9	8	1	0	2	98	88	27	4	0	0	2	3	6
RP-T1-6_contig.fa_viral_336	5	0	1	1	0	2	0	0	0	5	5	50	0	0	0	33	91	28	2	0	0	2	1	2
RP-T1-6_contig.fa_viral_337	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	98	35	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_338	0	0	1	0	0	3	0	0	1	17	6	4	0	0	0	73	54	20	3	2	2	1	1	1
RP-T1-6_contig.fa_viral_340	234	252	136	160	103	177	144	147	148	279	293	432	88	92	101	518	806	425	197	182	187	178	324	200
RP-T1-6_contig.fa_viral_341	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	89	8	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_342	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	120	19	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_343	15	6	2	5	2	6	3	5	0	159	16	12	3	0	0	31	243	262	4	4	1	5	28	22
RP-T1-6_contig.fa_viral_344	29	27	15	15	4	25	34	14	40	80	32	51	6	3	6	50	89	51	38	12	18	12	82	35
RP-T1-6_contig.fa_viral_345	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	73	10	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_346	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	121	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_347	34	32	27	43	4	18	83	62	40	71	35	117	0	1	0	187	347	182	68	32	39	22	62	23
RP-T1-6_contig.fa_viral_348	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	10	216	52	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_349	3	1	0	0	0	0	0	1	0	0	0	2	1	0	0	225	77	40	0	0	0	0	1	1
RP-T1-6_contig.fa_viral_350	33	20	10	17	13	7	2	7	4	25	31	113	13	9	6	33	170	71	10	10	2	5	25	14
RP-T1-6_contig.fa_viral_351	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	59	31	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_352	58	29	26	23	13	29	12	14	16	19	24	48	8	10	12	37	172	115	23	19	17	27	44	22
RP-T1-6_contig.fa_viral_353	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	96	44	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_354	8	1	0	0	0	1	0	0	0	0	1	3	0	0	0	44	173	166	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_355	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	115	38	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_356	6	6	5	2	1	1	3	1	1	9	28	155	3	0	1	65	266	91	13	0	1	2	8	6
RP-T1-6_contig.fa_viral_357	4	1	0	1	0	0	1	0	5	4	3	6	0	0	0	19	94	2	1	0	1	3	0	1
11B-T1-3_contig.fa_provirus_1	111	1	6	4	0	1	1	0	1	1	5	1	0	0	0	6	14	6	2	0	0	0	7	2
11B-T1-3_contig.fa_viral_1	79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11B-T1-3_contig.fa_viral_2	37	13	24	27	1	23	45	57	16	27	9	20	1	0	0	10	20	13	65	62	36	18	60	28
11B-T1-3_contig.fa_viral_3	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11B-T1-3_contig.fa_viral_4	261	32	9	73	13	57	41	19	58	51	32	35	0	1	0	61	181	91	37	8	28	23	126	55
11B-T1-3_contig.fa_viral_5	142	11	8	7	1	5	4	1	9	5	2	5	0	0	0	11	17	12	10	1	3	5	15	9
11B-T1-3_contig.fa_viral_6	148	69	5	81	11	44	32	13	22	43	34	60	0	0	0	16	35	13	12	10	8	37	240	112
11B-T1-3_contig.fa_viral_7	90	1	2	7	0	1	4	1	4	6	2	1	0	0	0	11	32	5	1	0	2	1	8	1
11B-T1-3_contig.fa_viral_8	738	553	165	347	103	216	174	131	88	183	204	262	100	90	61	284	616	303	233	121	83	198	567	352
11B-T1-3_contig.fa_viral_9	87	6	1	8	9	0	1	0	4	13	2	11	5	4	4	10	41	19	10	4	0	1	2	3
11B-T1-3_contig.fa_viral_10	143	14	3	30	10	26	27	11	32	29	9	20	0	0	0	22	75	30	15	11	17	14	83	40
11B-T1-3_contig.fa_viral_11	108	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	6	0	0	0	0	0	0
11B-T1-3_contig.fa_viral_12	66	11	6	2	1	1	3	2	0	6	1	1	1	0	0	3	10	7	1	0	0	2	4	4
11B-T1-3_contig.fa_viral_13	125	71	20	60	33	68	62	45	38	46	75	29	8	4	2	50	49	17	89	55	43	52	116	94
11B-T1-3_contig.fa_viral_14	177	164	125	158	13	58	330	188	52	37	19	55	3	2	0	108	192	128	86	66	45	107	391	122
RP-T1-6_contig.fa_viral_201	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	77	61	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_202	0	0	0	0	1	1	1	2	1	2	1	1	0	0	0	29	88	17	8	3	2	2	14	0
RP-T1-6_contig.fa_viral_203	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	19	71	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_204	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	52	99	23	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_205	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	324	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_207	6	0	0	0	0	0	0	0	0	5	19	3	0	0	0	12	83	12	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_208	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	150	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_209	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	155	106	6	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_210	4	0	0	0	1	0	0	0	1	2	7	11	0	1	0	16	160	6	2	1	0	0	1	0
RP-T1-6_contig.fa_viral_211	2	0	0	0	0	0	0	0	0	4	15	2	0	0	0	66	87	33	1	0	0	0	1	0
RP-T1-6_contig.fa_viral_212	5	3	7	6	2	5	3	6	4	16	37	104	7	2	3	97	189	116	5	3	4	3	18	11
RP-T1-6_contig.fa_viral_213	14	2	1	2	0	7	8	5	5	14	46	67	1	0	0	61	142	51	20	3	6	0	27	11
RP-T1-6_contig.fa_viral_214	19	16	10	12	4	3	7	0	4	12	14	32	6	6	4	129	215	65	5	5	5	4	21	16
RP-T1-6_contig.fa_viral_215	131	91	25	62	32	46	41	26	24	66	57	91	15	34	14	84	307	133	34	15	21	40	146	95
RP-T1-6_contig.fa_viral_216	19	15	5	15	12	13	8	6	6	23	33	86	11	3	9	56	237	94	14	3	10	9	28	20
RP-T1-6_contig.fa_viral_217	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	171	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_218	21	24	8	28	8	15	8	12	3	11	19	34	3	8	2	34	138	53	23	4	8	12	34	23
RP-T1-6_contig.fa_viral_219	0	0	0	0	0	0	0	0	0	4	0	3	0	0	0	252	75	47	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_220	0	0	0	0	0	0	0	0	0	0	2	11	0	0	0	9	65	15	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_221	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	91	19	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_222	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	155	44	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_223	38	5	2	15	0	12	19	10	27	22	56	71	9	10	14	80	138	55	21	7	11	8	77	35
RP-T1-6_contig.fa_viral_225	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	106	37	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_226	1	0	1	3	0	2	0	1	4	98	7	12	0	0	0	919	143	32	1	0	4	1	2	1
RP-T1-6_contig.fa_viral_228	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	83	16	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_229	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	73	128	85	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_230	1	0	0	0	0	0	1	0	1	25	15	55	0	0	0	57	183	34	1	0	0	0	6	3
RP-T1-6_contig.fa_viral_231	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	33	69	5	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_233	2	0	0	0	0	0	0	0	0	0	63	4	0	2	0	15	141	82	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_234	2	0	1	0	0	0	0	0	1	4	3	4	0	0	0	27	101	44	2	2	1	1	4	4
RP-T1-6_contig.fa_viral_235	2	0	2	1	1	0	0	0	2	1	0	1	0	0	0	15	81	28	1	0	0	0	0	0
RP-T1-6_contig.fa_viral_236	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	110	67	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_237	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	106	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_239	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	152	33	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_240	1	0	0	0	0	0	0	0	0	7	16	43	0	0	0	57	263	120	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_241	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	100	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_242	2	0	0	0	0	1	1	0	0	3	3	5	0	3	0	29	106	38	0	0	3	0	5	1
RP-T1-6_contig.fa_viral_243	342	103	19	126	22	102	98	63	96	137	85	147	11	17	11	172	356	185	122	38	54	62	237	136
RP-T1-6_contig.fa_viral_244	3	3	0	2	0	2	0	0	0	10	20	38	2	1	0	48	134	64	0	0	0	2	1	3
RP-T1-6_contig.fa_viral_245	42	8	2	2	1	7	3	2	7	69	16	33	0	3	0	63	159	74	22	1	8	2	15	5
RP-T1-6_contig.fa_viral_246	37	4	3	9	2	7	16	11	11	63	26	50	1	0	1	34	198	100	36	8	11	5	31	8
RP-T1-6_contig.fa_viral_247	0	0	0	4	0	0	0	0	0	2	4	19	0	0	0	15	61	27	5	0	0	0	1	1
RP-T1-6_contig.fa_viral_248	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	116	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_249	9	5	4	6	1	1	13	6	8	12	9	19	7	2	0	86	217	93	32	17	10	2	38	8
RP-T1-6_contig.fa_viral_250	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	62	99	38	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_251	28	6	14	14	5	9	31	14	13	45	41	119	5	1	1	136	293	138	35	15	16	12	69	25
RP-T1-6_contig.fa_viral_252	1	1	0	0	0	0	0	0	0	15	26	98	0	1	0	181	647	321	0	0	0	0	0	2
RP-T1-6_contig.fa_viral_253	7	14	17	11	11	28	6	11	14	29	57	74	4	8	13	135	146	104	12	12	14	9	29	10
RP-T1-6_contig.fa_viral_254	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	120	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_255	7	1	0	4	1	4	4	1	0	5	6	27	0	0	0	19	105	63	8	2	0	1	6	3
RP-T1-6_contig.fa_viral_256	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	84	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_257	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	169	98	77	0	0	0	0	0	0
SC-T1-3_contig.fa_viral_204	5	25	54	21	17	55	35	32	31	5	1	1	10	3	0	9	0	6	106	89	57	23	35	23
SC-T1-3_contig.fa_viral_205	4	57	199	18	3	44	17	71	0	0	0	0	0	0	0	0	0	0	71	32	14	45	33	17
SC-T1-3_contig.fa_viral_206	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	178	4	0	1	1	2
SC-T1-3_contig.fa_viral_207	4	2	1	0	0	0	5	12	0	7	1	4	0	0	0	15	5	7	86	36	23	7	2	1
SC-T1-3_contig.fa_viral_208	3	21	25	22	18	29	9	11	8	17	6	19	5	7	1	8	0	1	88	9	12	14	18	10
SC-T1-3_contig.fa_viral_209	11	21	22	31	12	43	50	47	0	0	0	0	21	6	0	0	0	0	116	180	21	12	70	42
SC-T1-3_contig.fa_viral_210	20	45	22	35	23	42	25	15	18	20	72	37	35	35	48	59	67	46	320	15	24	20	53	41
SC-T1-3_contig.fa_viral_211	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	76	0	4	0	0	0
SC-T1-3_contig.fa_viral_212	4	13	5	4	4	1	53	75	1	0	0	0	3	0	0	3	2	0	152	241	161	17	21	8
SC-T1-3_contig.fa_viral_214	0	2	12	4	12	5	0	1	0	0	0	0	0	0	0	0	0	0	92	0	0	1	0	7
SC-T1-3_contig.fa_viral_215	9	57	71	20	5	30	42	35	0	0	0	0	0	0	0	0	0	0	37	29	4	30	58	78
SC-T1-3_contig.fa_viral_216	10	16	10	18	11	16	14	15	6	5	9	6	11	8	4	8	2	6	75	10	9	16	19	12
SC-T1-3_contig.fa_viral_217	3	1	0	0	22	6	1	2	1	1	0	0	4	8	6	1	0	2	274	0	0	3	0	0
SC-T1-3_contig.fa_viral_218	12	55	28	73	27	53	103	112	95	46	19	33	0	0	0	110	8	37	170	177	256	127	85	28
SC-T1-3_contig.fa_viral_219	3	62	239	8	10	62	33	75	0	0	0	0	0	0	0	0	0	0	130	71	23	62	42	22
SC-T1-3_contig.fa_viral_220	0	0	0	0	0	0	6	0	0	0	3	0	0	0	0	0	0	0	329	0	1	0	0	0
SC-T1-3_contig.fa_viral_221	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	136	7	64	0	0	0
SC-T1-3_contig.fa_viral_222	75	211	218	89	18	104	221	262	9	1	1	0	10	4	0	4	2	1	172	140	36	114	317	179
SC-T1-3_contig.fa_viral_223	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	138	0	0	0	0	0
SC-T1-3_contig.fa_viral_224	24	19	22	34	10	25	75	62	40	9	9	13	24	11	7	27	19	24	94	70	50	11	43	31
SC-T1-3_contig.fa_viral_225	7	16	18	3	8	9	18	14	2	2	3	2	1	5	1	2	6	2	195	23	16	6	11	17
SC-T1-3_contig.fa_viral_226	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	68	2	23	0	0	0
SC-T1-3_contig.fa_viral_227	19	95	104	41	47	101	49	78	7	0	0	0	19	10	12	0	0	0	96	126	49	49	110	79
SC-T1-3_contig.fa_viral_228	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	102	0	0	0	0	0
SC-T1-3_contig.fa_viral_229	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	155	0	0	0	0	0
SC-T1-3_contig.fa_viral_230	6	77	212	20	14	74	24	97	0	0	0	0	0	0	0	0	0	0	188	55	19	66	62	21
SC-T1-3_contig.fa_viral_231	0	1	1	6	0	3	12	9	3	5	1	0	0	0	0	2	0	0	85	38	45	4	9	0
SC-T1-3_contig.fa_viral_232	8	66	28	23	24	138	38	49	60	9	19	1	3	5	5	27	0	11	149	89	62	41	67	50
SC-T1-3_contig.fa_viral_233	0	0	0	0	0	0	1	1	2	0	2	0	0	0	0	0	0	0	130	1	5	0	7	0
SC-T1-3_contig.fa_viral_234	0	3	0	0	0	0	1	0	0	0	0	0	3	2	2	0	2	0	189	1	0	0	5	0
SC-T1-3_contig.fa_viral_235	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	284	0	0	0	0	0
SC-T1-3_contig.fa_viral_236	0	8	9	7	0	2	21	35	0	2	0	0	0	0	0	0	0	4	170	101	61	9	6	31
SC-T1-3_contig.fa_viral_237	1	3	12	0	3	1	7	16	0	0	0	0	3	3	0	0	0	0	91	11	9	5	1	1
SC-T1-3_contig.fa_viral_238	267	285	195	242	154	246	200	195	150	253	302	344	159	114	129	526	641	446	348	217	128	188	514	245
SC-T1-3_contig.fa_viral_241	0	0	1	14	3	0	21	15	13	19	2	5	0	0	0	10	2	13	115	54	50	7	18	5
SC-T1-3_contig.fa_viral_242	0	1	4	0	0	0	7	16	1	0	0	0	0	0	0	0	0	0	120	3	3	2	4	5
SC-T1-3_contig.fa_viral_243	0	0	0	5	0	0	0	2	1	0	17	0	0	0	0	0	0	0	111	10	19	0	39	0
SC-T1-3_contig.fa_viral_244	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	215	4	2	4	0	0
SC-T1-3_contig.fa_viral_245	0	0	0	0	3	0	0	0	0	0	0	0	1	1	0	0	0	0	782	0	0	0	0	0
SC-T1-3_contig.fa_viral_246	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	103	0	0	0	0	0
SC-T1-3_contig.fa_viral_247	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	201	0	0	0	0	1
SC-T1-3_contig.fa_viral_248	0	3	15	5	0	3	15	44	0	0	0	0	0	0	0	0	0	0	230	7	3	15	7	13
SC-T1-3_contig.fa_viral_250	0	1	2	2	3	7	1	1	1	0	0	0	0	0	0	0	0	0	64	6	0	0	6	3
SC-T1-3_contig.fa_viral_251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	196	0	0	0	0	0
SC-T1-3_contig.fa_viral_252	0	0	0	1	1	1	5	6	8	1	1	0	0	0	0	3	1	1	93	77	116	3	1	3
SC-T1-3_contig.fa_viral_253	0	0	0	0	0	0	3	6	0	0	1	0	0	0	0	2	1	1	85	52	47	1	6	6
SC-T1-3_contig.fa_viral_254	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	102	0	0	0	0	2
SC-T1-3_contig.fa_viral_255	2	14	54	12	11	12	19	32	4	2	11	2	5	2	2	7	5	5	98	165	45	11	32	7
RP-T1-3_contig.fa_viral_587	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	184	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_589	0	0	0	0	0	0	2	1	17	22	18	10	0	0	0	163	2	22	0	1	1	1	0	0
RP-T1-3_contig.fa_viral_590	0	0	0	0	0	0	0	0	0	31	1	0	0	0	0	96	17	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_591	1	2	2	11	2	10	10	6	34	15	5	13	0	0	0	623	6	23	7	44	74	15	7	1
RP-T1-3_contig.fa_viral_592	2	4	0	8	0	1	31	15	36	164	27	17	0	0	0	700	9	213	5	14	17	19	14	6
RP-T1-3_contig.fa_viral_593	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	173	0	0	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_595	3	0	0	0	0	0	0	0	0	3	29	19	0	0	0	1010	5	9	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_596	68	62	38	60	2	28	96	69	51	28	14	57	0	3	2	137	187	122	37	38	20	44	214	67
RP-T1-3_contig.fa_viral_597	0	0	0	0	0	0	2	0	70	172	35	5	0	0	0	631	2	134	0	0	0	2	0	0
RP-T1-3_contig.fa_viral_598	1	10	7	21	4	10	15	9	65	65	14	30	4	2	2	183	40	125	12	19	30	17	19	15
RP-T1-3_contig.fa_viral_599	1	15	14	33	2	7	12	9	32	31	5	2	0	1	0	67	4	35	0	4	0	22	21	11
RP-T1-3_contig.fa_viral_600	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	708	0	9	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_602	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	115	2	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_604	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	259	0	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_605	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	165	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_606	37	42	26	30	3	15	63	47	34	40	28	60	2	3	2	247	450	206	59	36	31	25	100	40
RP-T1-3_contig.fa_viral_607	9	12	11	7	4	2	9	8	4	27	18	10	3	1	4	198	10	6	6	9	8	5	11	4
RP-T1-3_contig.fa_viral_608	1	2	2	7	0	2	17	10	4	47	11	6	0	0	0	250	3	83	5	17	33	9	8	3
RP-T1-3_contig.fa_viral_609	0	0	0	0	0	0	0	0	0	6	2	0	0	0	0	111	7	3	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_610	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	470	3	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_611	8	2	0	4	4	4	1	2	2	7	3	11	0	0	0	128	5	6	6	3	2	1	3	3
RP-T1-3_contig.fa_viral_612	23	14	12	14	5	10	24	12	11	31	29	76	2	2	2	152	323	135	37	18	10	7	47	18
RP-T1-3_contig.fa_viral_613	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	67	2	11	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_615	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	115	51	9	0	0	1	0	0	1
RP-T1-3_contig.fa_viral_616	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	126	46	34	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_617	0	5	3	10	0	10	7	11	16	11	10	10	0	0	0	178	10	10	13	17	24	10	8	3
RP-T1-3_contig.fa_viral_618	9	4	1	0	3	5	0	2	15	39	20	0	0	0	3	121	13	32	0	3	4	1	3	2
RP-T1-3_contig.fa_viral_619	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	124	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_620	0	0	0	0	0	0	2	0	1	15	15	28	0	0	0	166	11	35	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_621	0	2	0	0	0	1	4	1	14	45	83	68	0	0	0	236	23	28	1	1	3	1	1	4
RP-T1-3_contig.fa_viral_622	0	0	0	0	0	0	0	0	0	13	5	0	0	0	0	150	36	27	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_623	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	83	7	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_624	3	4	1	2	0	2	1	2	2	7	29	34	0	0	1	219	51	10	1	0	1	1	0	0
RP-T1-3_contig.fa_viral_625	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	93	2	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_626	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	281	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_627	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_628	0	0	0	0	0	0	0	0	0	6	28	33	0	0	0	96	0	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_629	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	243	2	6	0	0	0	0	0	1
RP-T1-3_contig.fa_viral_630	0	0	0	0	0	0	0	0	2	5	1	3	0	0	0	124	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_631	10	24	26	16	6	17	15	18	20	26	11	18	11	6	7	833	97	110	48	32	36	7	22	16
RP-T1-3_contig.fa_viral_632	0	0	0	0	0	0	0	0	0	56	7	1	0	0	0	78	0	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_633	84	143	93	124	90	137	68	83	85	107	158	153	45	40	50	474	108	80	114	85	86	95	155	87
RP-T1-3_contig.fa_viral_634	2	1	0	1	0	2	0	0	0	3	2	5	1	2	2	67	0	0	1	0	1	0	1	1
RP-T1-3_contig.fa_viral_635	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	89	23	1	1	1	0	0	1	0
RP-T1-3_contig.fa_viral_636	0	3	1	2	0	1	2	4	3	128	103	81	0	1	0	197	7	16	6	5	13	2	0	2
RP-T1-3_contig.fa_viral_637	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	123	0	6	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_638	2	2	5	2	0	2	1	4	0	1	0	3	0	0	0	1936	837	72	7	16	14	3	0	1
RP-T1-3_contig.fa_viral_639	0	0	0	0	0	0	0	0	1	9	8	5	0	0	0	88	29	9	3	0	0	0	0	0
RP-T1-3_contig.fa_viral_640	0	0	0	0	0	0	0	0	0	3	0	8	2	0	0	437	205	72	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_641	0	0	0	0	0	1	0	0	0	2	2	0	0	0	0	122	2	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_642	0	3	6	2	1	8	3	7	5	28	6	9	1	1	4	89	8	4	4	7	8	4	9	5
RP-T1-3_contig.fa_viral_643	3	2	1	1	0	4	0	0	4	11	11	7	0	1	0	125	8	4	1	2	3	1	1	0
RP-T1-3_contig.fa_viral_644	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1167	0	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_645	0	0	0	1	0	0	3	1	0	4	1	11	1	0	0	70	23	14	1	0	0	1	8	8
RP-T1-3_contig.fa_viral_646	0	0	0	0	0	0	0	0	2	3	4	0	0	0	0	170	11	25	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_647	0	0	0	0	0	0	0	0	0	69	3	0	0	0	0	80	0	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_648	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	56	9	5	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_649	15	19	10	14	8	14	11	18	24	25	36	22	1	2	7	113	18	23	13	14	18	9	17	12
RP-T1-3_contig.fa_viral_650	2	3	1	1	3	2	1	1	1	9	11	1	0	0	2	158	12	9	0	1	0	0	2	1
RP-T1-3_contig.fa_viral_651	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	163	22	17	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_652	5	6	3	4	1	10	5	5	6	2	5	3	0	7	6	212	50	61	0	8	12	1	6	6
RP-T1-3_contig.fa_viral_653	0	0	0	1	0	1	1	0	4	1	0	0	0	0	0	194	42	9	4	2	11	0	2	0
RP-T1-3_contig.fa_viral_654	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	109	31	22	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_655	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	97	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_656	1	3	1	3	0	1	3	1	5	1203	1215	1320	0	0	0	4483	179	210	3	1	4	3	3	0
RP-T1-3_contig.fa_viral_657	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	98	26	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_658	0	0	0	0	0	2	0	1	1	10	11	25	0	0	0	210	9	31	0	0	2	0	2	1
RP-T1-3_contig.fa_viral_659	0	0	0	0	0	0	0	0	0	1	0	1	1	0	1	1049	0	11	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_660	38	54	60	44	47	97	39	50	42	29	56	28	79	61	62	132	68	74	81	64	55	36	120	86
RP-T1-9_contig.fa_viral_133	0	0	1	0	0	0	0	0	0	1	6	6	0	0	0	635	276	114	0	0	2	0	0	0
RP-T1-9_contig.fa_viral_134	8	1	0	4	0	3	0	0	1	13	2	9	0	0	0	45	243	79	3	0	0	4	5	2
RP-T1-9_contig.fa_viral_136	6	0	0	0	1	0	0	0	0	3	0	4	0	1	0	4	6	92	3	0	0	1	0	0
RP-T1-9_contig.fa_viral_137	0	3	0	2	1	4	2	3	19	91	9	4	0	0	0	210	27	183	0	0	1	4	3	0
RP-T1-9_contig.fa_viral_138	4	0	0	1	0	0	0	0	1	2	33	6	0	0	0	5	93	73	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_139	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	2	106	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_140	1	0	0	0	0	0	0	0	0	2	1	5	0	0	0	12	118	58	0	1	0	0	0	0
RP-T1-9_contig.fa_viral_142	26	20	9	22	7	6	18	13	10	40	45	120	7	1	2	117	232	180	40	25	15	4	84	26
RP-T1-9_contig.fa_viral_143	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	118	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_144	17	7	4	4	4	5	7	3	4	8	10	7	3	1	6	27	68	98	4	4	3	7	14	6
RP-T1-9_contig.fa_viral_145	69	3	2	8	3	7	1	4	8	15	8	19	1	1	0	39	109	67	6	0	2	2	28	15
RP-T1-9_contig.fa_viral_147	1	0	2	0	0	2	0	0	3	5	6	9	0	0	0	95	106	90	0	0	1	1	2	1
RP-T1-9_contig.fa_viral_148	1	1	1	1	0	1	3	1	4	21	5	8	0	0	0	62	13	84	5	3	0	2	3	0
RP-T1-9_contig.fa_viral_149	57	62	24	46	21	50	46	23	26	34	88	161	35	24	22	108	297	162	62	20	27	28	129	46
RP-T1-9_contig.fa_viral_151	1	3	4	23	4	19	14	6	85	92	11	1	0	0	0	169	25	111	0	3	3	7	3	2
RP-T1-9_contig.fa_viral_152	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	187	0	0	1	0	0	0
RP-T1-9_contig.fa_viral_153	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	6	88	0	0	1	0	0	0
RP-T1-9_contig.fa_viral_154	123	74	31	59	32	54	29	23	13	61	85	212	33	26	16	152	423	351	82	30	24	28	101	92
RP-T1-9_contig.fa_viral_155	132	77	53	71	32	71	55	42	47	119	98	108	33	45	28	107	301	277	38	22	28	42	127	49
RP-T1-9_contig.fa_viral_157	3	7	0	11	0	1	10	12	16	12	4	6	0	0	0	478	137	141	11	5	16	9	5	5
RP-T1-9_contig.fa_viral_158	0	0	1	3	1	2	0	1	1	40	2	0	0	0	0	85	12	96	0	0	0	0	1	0
RP-T1-9_contig.fa_viral_159	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	19	74	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_160	0	0	2	3	0	6	3	4	69	185	31	10	0	0	0	719	4	168	1	4	2	0	4	4
RP-T1-9_contig.fa_viral_161	0	0	0	0	0	0	0	1	0	28	19	34	0	1	0	41	117	80	0	0	0	0	1	1
RP-T1-9_contig.fa_viral_162	0	0	0	0	0	1	0	1	0	2	1	2	0	0	0	0	2	87	6	0	1	0	0	0
RP-T1-9_contig.fa_viral_163	32	8	6	16	2	5	20	4	11	47	18	31	0	1	1	34	106	69	18	4	11	7	27	17
RP-T1-9_contig.fa_viral_164	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	64	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_165	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	35	134	115	0	1	1	0	1	0
RP-T1-9_contig.fa_viral_166	37	25	12	19	11	28	19	16	11	21	63	52	3	13	5	56	197	158	15	17	11	23	69	41
RP-T1-9_contig.fa_viral_167	0	9	3	23	5	37	20	6	66	73	13	0	0	0	0	150	27	168	2	4	5	19	9	6
RP-T1-9_contig.fa_viral_168	0	0	1	1	0	1	2	1	0	0	0	0	0	0	1	5	3	87	39	0	0	1	0	0
Ex45-T1-3_contig.fa_viral_56	0	0	0	0	0	0	83	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_57	36	29	31	30	9	18	102	38	13	3	2	9	4	7	1	6	8	3	22	18	10	20	96	20
Ex45-T1-3_contig.fa_viral_58	0	6	10	28	3	10	128	61	31	8	1	4	0	0	0	15	2	7	30	39	103	67	55	27
Ex45-T1-3_contig.fa_viral_59	39	112	151	71	10	79	141	134	34	9	8	3	5	4	2	11	8	6	93	100	37	52	142	80
Ex45-T1-3_contig.fa_viral_60	3	7	1	33	0	16	124	60	12	6	3	4	0	0	0	1	1	2	13	29	48	55	42	3
Ex45-T1-3_contig.fa_viral_61	96	210	298	153	57	201	344	305	79	11	12	20	3	0	0	33	22	14	179	218	90	159	393	294
Ex45-T1-3_contig.fa_viral_62	0	0	0	0	0	0	95	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-3_contig.fa_viral_63	18	71	122	38	12	64	110	114	49	12	3	7	11	3	2	8	3	17	70	105	49	55	124	58
Ex45-T1-3_contig.fa_viral_64	35	44	51	21	4	45	226	137	32	14	5	15	4	2	3	12	23	9	160	135	97	54	86	60
Ex45-T1-3_contig.fa_viral_65	124	344	42	263	17	110	238	129	11	5	18	18	1	2	3	6	14	6	39	13	15	106	722	480
Ex45-T1-3_contig.fa_viral_66	7	4	4	16	2	17	101	59	27	15	1	2	0	0	0	47	1	20	27	68	94	50	57	26
Ex45-T1-3_contig.fa_viral_67	19	32	21	35	9	14	74	50	6	10	3	16	0	0	1	20	50	24	28	20	13	22	72	37
Ex45-T1-3_contig.fa_viral_68	64	101	51	32	5	8	65	27	3	5	11	19	2	11	2	15	29	24	9	7	6	104	103	115
Ex45-T1-6_contig.fa_provirus_1	38	44	21	36	5	6	68	48	10	8	1	25	5	3	1	27	58	35	37	23	30	31	88	31
Ex45-T1-6_contig.fa_provirus_2	0	0	0	0	0	5	4	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1
Ex45-T1-6_contig.fa_viral_1	1	5	5	0	0	1	53	99	0	0	0	0	0	0	0	1	0	0	38	53	47	13	6	3
Ex45-T1-6_contig.fa_viral_2	11	19	15	16	7	26	18	57	0	0	1	0	0	0	0	0	0	0	3	2	0	30	19	13
Ex45-T1-6_contig.fa_viral_3	27	54	53	8	2	7	46	94	9	2	1	4	5	4	0	10	11	6	28	28	23	32	53	27
Ex45-T1-6_contig.fa_viral_5	34	118	191	77	42	66	106	153	2	1	0	0	0	1	0	0	0	0	52	49	19	103	185	141
Ex45-T1-6_contig.fa_viral_6	0	3	2	0	0	10	5	108	3	0	0	0	0	2	0	0	0	2	10	7	9	6	4	2
Ex45-T1-6_contig.fa_viral_7	9	42	182	8	7	60	18	105	0	0	0	0	0	0	0	0	0	0	91	37	14	49	37	17
Ex45-T1-6_contig.fa_viral_8	7	28	130	10	5	31	17	72	0	0	0	0	0	0	0	0	0	0	48	14	8	48	27	9
Ex45-T1-6_contig.fa_viral_9	7	69	208	10	6	62	17	77	0	0	0	0	0	0	0	0	0	0	64	35	17	39	37	19
Ex45-T1-6_contig.fa_viral_10	4	19	11	11	25	101	54	103	49	10	11	3	0	1	5	7	0	3	9	37	42	27	56	22
Ex45-T1-6_contig.fa_viral_11	140	142	99	126	8	58	222	218	39	23	9	49	13	11	5	109	194	141	119	116	57	95	386	98
Ex45-T1-6_contig.fa_viral_12	0	6	6	7	20	38	31	80	25	2	3	0	0	0	0	11	2	2	7	19	16	12	25	11
Ex45-T1-6_contig.fa_viral_13	4	13	10	38	7	24	158	88	72	9	4	3	0	0	0	15	1	3	53	91	186	129	99	42
Ex45-T1-6_contig.fa_viral_14	9	60	184	5	11	1	28	134	0	0	0	0	11	4	1	0	0	0	96	44	8	31	48	53
Ex45-T1-6_contig.fa_viral_16	0	0	0	0	0	0	0	76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_17	20	54	43	29	2	17	35	50	3	5	2	1	9	3	1	9	0	0	26	30	4	57	93	64
Ex45-T1-6_contig.fa_viral_18	0	0	3	0	0	0	0	97	1	0	0	0	0	0	0	0	0	0	0	1	0	0	2	2
Ex45-T1-6_contig.fa_viral_19	11	53	71	10	6	29	34	116	15	0	0	3	0	0	0	0	0	1	37	55	26	17	41	36
Ex45-T1-6_contig.fa_viral_20	7	15	108	11	374	161	15	100	6	2	0	0	49	16	4	1	1	0	243	30	6	26	19	22
Ex45-T1-6_contig.fa_viral_22	36	44	35	6	3	19	44	83	12	4	2	8	1	0	0	10	6	8	46	47	33	21	42	25
Ex45-T1-6_contig.fa_viral_23	4	5	8	0	2	3	20	81	0	0	0	0	0	0	0	0	0	0	0	2	4	42	33	24
Ex45-T1-6_contig.fa_viral_24	0	5	5	2	0	0	17	78	0	0	1	0	0	0	0	0	0	0	18	11	15	23	11	11
Ex45-T1-6_contig.fa_viral_25	4	10	7	72	5	18	165	111	26	7	5	10	0	0	0	9	0	1	56	77	194	101	128	52
Ex45-T1-6_contig.fa_viral_26	2	10	9	25	6	18	137	89	31	8	6	2	0	0	0	6	0	1	35	75	178	121	116	28
Ex45-T1-6_contig.fa_viral_27	1	59	173	4	7	16	18	116	0	0	0	0	0	0	0	0	0	0	12	5	1	47	29	16
Ex45-T1-6_contig.fa_viral_29	1	39	140	9	11	28	12	67	1	0	0	0	0	0	0	0	0	0	49	18	7	34	15	11
Ex45-T1-6_contig.fa_viral_30	0	2	0	1	2	4	2	123	2	0	2	0	0	0	0	0	0	0	3	18	5	5	7	2
Ex45-T1-6_contig.fa_viral_31	9	113	266	24	15	59	64	309	4	2	2	4	19	16	15	2	0	0	92	169	64	103	69	58
Ex45-T1-6_contig.fa_viral_32	0	1	1	0	0	3	1	209	3	0	1	0	1	0	0	0	0	0	1	0	0	1	2	3
Ex45-T1-6_contig.fa_viral_33	7	59	38	56	70	359	94	188	98	9	8	0	0	2	0	1	1	7	42	142	88	68	183	111
Ex45-T1-6_contig.fa_viral_35	78	89	79	65	11	88	140	154	56	47	20	48	7	2	5	73	90	45	245	175	154	74	224	92
Ex45-T1-6_contig.fa_viral_36	2	5	17	6	0	2	19	115	2	1	1	2	1	0	0	5	0	3	15	10	11	32	10	8
Ex45-T1-6_contig.fa_viral_37	5	26	21	32	30	137	48	110	56	1	6	0	0	3	0	0	0	1	10	56	26	31	82	46
Ex45-T1-6_contig.fa_viral_38	5	73	238	16	7	82	26	99	0	0	0	0	0	0	0	0	0	0	79	38	10	47	32	43
Ex45-T1-6_contig.fa_viral_39	2	12	14	4	0	6	23	117	14	4	7	9	0	0	0	15	0	4	40	27	58	23	20	6
Ex45-T1-6_contig.fa_viral_41	6	40	90	22	13	27	22	75	5	1	1	0	7	3	1	4	0	2	36	55	31	16	45	38
Ex45-T1-6_contig.fa_viral_42	1	5	5	3	0	2	7	74	3	0	0	0	0	0	0	0	0	0	0	1	1	16	14	2
Ex45-T1-6_contig.fa_viral_43	4	7	1	11	9	27	7	84	23	9	13	6	0	1	0	21	13	6	9	4	5	3	16	17
Ex45-T1-6_contig.fa_viral_44	14	42	33	16	11	13	107	143	3	2	5	4	1	1	0	3	1	1	47	12	15	112	159	80
Ex45-T1-6_contig.fa_viral_45	0	1	8	4	1	1	7	81	8	2	0	1	0	0	0	4	0	1	5	2	7	14	16	13
Ex45-T1-6_contig.fa_viral_46	22	35	17	19	7	10	56	49	0	8	7	11	3	1	3	19	20	9	47	43	10	76	93	88
Ex45-T1-6_contig.fa_viral_48	7	11	16	0	0	3	25	94	0	0	0	0	0	0	0	0	0	0	4	31	37	68	22	25
Ex45-T1-6_contig.fa_viral_49	0	1	0	1	1	4	3	384	7	0	0	0	0	0	0	1	0	1	2	5	1	1	4	0
Ex45-T1-6_contig.fa_viral_50	22	94	305	45	19	50	108	430	4	1	2	6	63	50	3	5	4	2	156	94	19	125	186	173
Ex45-T1-6_contig.fa_viral_51	7	25	18	41	11	28	175	113	87	92	41	49	0	0	0	177	19	47	57	115	198	112	120	24
Ex45-T1-6_contig.fa_viral_52	0	25	22	5	6	11	56	116	2	2	3	3	2	0	0	8	0	1	51	155	112	37	19	15
Ex45-T1-6_contig.fa_viral_53	0	1	0	1	5	26	10	87	15	0	0	0	0	0	0	0	0	0	0	1	6	3	9	1
Ex45-T1-6_contig.fa_viral_54	0	1	0	3	3	23	9	60	6	0	0	0	0	0	0	0	0	0	1	0	5	5	9	7
Ex45-T1-6_contig.fa_viral_55	2	11	10	43	7	10	121	101	41	15	1	8	0	0	0	29	2	9	57	79	168	84	85	22
Ex45-T1-6_contig.fa_viral_56	15	80	119	55	11	52	60	99	84	6	5	1	23	14	3	10	2	10	61	69	50	33	90	46
Ex45-T1-6_contig.fa_viral_58	2	3	9	3	0	7	6	74	0	0	0	1	0	0	0	1	0	0	2	1	1	25	17	6
Ex45-T1-6_contig.fa_viral_59	0	0	0	0	0	0	0	122	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_60	0	0	0	0	0	0	0	121	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_61	85	177	265	176	67	213	187	193	31	12	10	7	21	8	2	15	27	13	186	180	86	85	214	172
Ex45-T1-6_contig.fa_viral_62	14	68	121	59	11	25	59	251	13	1	1	1	26	12	4	3	3	0	81	80	26	53	71	59
Ex45-T1-6_contig.fa_viral_63	14	61	31	25	47	212	65	99	95	7	12	0	0	2	0	22	3	7	47	105	87	57	127	80
Ex45-T1-6_contig.fa_viral_64	2	32	56	13	2	6	43	75	0	0	0	0	0	0	0	0	0	0	41	43	3	69	48	33
Ex45-T1-6_contig.fa_viral_65	20	61	48	40	1	54	43	82	27	9	2	8	0	0	0	28	9	7	48	31	66	41	46	24
Ex45-T1-6_contig.fa_viral_66	20	44	31	32	9	26	72	75	16	33	11	4	0	0	0	74	3	22	26	28	37	89	90	37
Ex45-T1-6_contig.fa_viral_67	5	88	164	57	21	41	65	167	20	3	6	5	9	5	0	28	10	16	134	120	42	33	57	53
Ex45-T1-6_contig.fa_viral_69	0	0	0	0	0	0	1	88	1	0	1	0	0	0	0	0	0	0	2	0	0	0	1	3
Ex45-T1-6_contig.fa_viral_70	1	5	0	0	1	19	3	76	3	0	0	0	0	0	0	0	0	0	3	1	0	4	3	3
Ex45-T1-6_contig.fa_viral_71	0	0	0	0	0	0	3	127	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ex45-T1-6_contig.fa_viral_73	0	0	0	0	0	2	1	172	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
Ex45-T1-6_contig.fa_viral_75	16	36	36	19	8	17	37	125	5	1	0	9	5	3	2	3	7	1	49	29	10	44	61	83
Ex45-T1-6_contig.fa_viral_76	56	200	362	83	48	121	199	225	13	2	11	4	3	7	1	3	8	7	135	134	41	135	349	310
SC-T1-3_contig.fa_viral_104	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	107	0	0	0	0	0
SC-T1-3_contig.fa_viral_105	0	2	57	0	7	7	9	27	0	0	0	0	0	2	0	0	0	0	128	7	0	13	13	4
SC-T1-3_contig.fa_viral_106	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	226	0	1	0	1	0
SC-T1-3_contig.fa_viral_107	1	1	3	1	7	2	0	0	1	0	0	0	2	1	3	0	0	0	285	2	1	2	0	0
SC-T1-3_contig.fa_viral_108	3	5	9	6	1	3	8	6	1	0	16	1	1	3	0	18	3	6	144	14	9	11	14	4
SC-T1-3_contig.fa_viral_109	1	6	17	3	10	9	8	23	2	2	0	0	3	0	1	0	0	0	146	15	6	31	21	8
SC-T1-3_contig.fa_viral_110	32	55	43	31	7	37	40	45	3	3	5	5	8	7	5	10	15	7	102	84	16	57	73	62
SC-T1-3_contig.fa_viral_111	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	144	0	0	0	0	0
SC-T1-3_contig.fa_viral_112	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	64	0	0	0	0	0
SC-T1-3_contig.fa_viral_114	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	222	0	0	0	0	0
SC-T1-3_contig.fa_viral_115	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	114	0	0	0	0	0
SC-T1-3_contig.fa_viral_116	4	15	60	23	10	22	18	10	3	0	1	2	2	1	1	5	2	1	119	25	14	7	17	17
SC-T1-3_contig.fa_viral_117	0	2	10	4	11	4	0	0	0	0	0	0	0	0	0	0	0	0	66	0	0	0	0	0
SC-T1-3_contig.fa_viral_118	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	130	0	0	0	0	0
SC-T1-3_contig.fa_viral_119	3	44	138	1	6	53	27	45	1	0	0	0	0	0	0	0	0	0	137	53	25	48	35	25
SC-T1-3_contig.fa_viral_120	0	7	51	8	46	27	8	25	5	0	0	0	21	19	12	0	0	1	275	28	11	15	9	11
SC-T1-3_contig.fa_viral_121	2	4	27	13	38	14	0	2	0	0	0	0	0	0	0	0	0	0	215	0	1	2	1	7
SC-T1-3_contig.fa_viral_122	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	79	2	0	0	0	0
SC-T1-3_contig.fa_viral_123	17	49	68	33	9	49	64	114	15	3	6	5	2	0	2	6	1	1	137	78	26	41	85	40
SC-T1-3_contig.fa_viral_124	15	25	26	21	33	32	21	27	22	16	7	0	25	35	24	11	14	11	244	15	18	10	45	20
Ex45-T1-9_contig.fa_viral_13	79	18	3	53	6	37	40	12	158	13	12	10	0	2	0	5	17	7	25	11	12	20	98	45
Ex45-T1-9_contig.fa_viral_14	0	4	0	14	2	5	9	4	91	15	5	3	0	0	0	28	5	25	2	3	4	11	5	0
Ex45-T1-9_contig.fa_viral_15	15	88	148	83	48	186	45	63	243	68	3	7	25	19	17	17	5	26	46	60	22	37	69	68
Ex45-T1-9_contig.fa_viral_16	4	21	20	23	30	127	22	42	133	37	23	0	0	0	0	7	1	5	20	42	62	30	96	55
Ex45-T1-9_contig.fa_viral_17	0	0	1	5	0	3	5	2	80	0	7	1	0	0	0	4	0	0	0	3	8	0	1	0
Ex45-T1-9_contig.fa_viral_18	0	8	11	3	2	11	8	21	120	35	12	6	0	0	0	44	0	9	6	16	23	5	5	1
Ex45-T1-9_contig.fa_viral_19	0	3	1	3	0	0	2	1	55	66	6	2	3	0	3	34	11	32	0	0	2	5	3	2
Ex45-T1-9_contig.fa_viral_21	1	0	2	11	2	30	19	4	180	17	2	1	0	0	0	18	5	14	2	2	5	15	10	6
Ex45-T1-9_contig.fa_viral_22	0	4	0	2	7	4	6	13	73	16	57	0	0	0	0	4	0	0	0	5	4	0	1	2
Ex45-T1-9_contig.fa_viral_23	1	2	2	33	6	47	24	5	168	32	14	4	0	0	0	31	11	58	5	6	8	28	22	6
Ex45-T1-9_contig.fa_viral_24	0	0	1	0	0	0	0	0	61	5	14	0	0	0	0	2	0	5	0	0	0	0	0	0
Ex45-T1-9_contig.fa_viral_25	6	8	14	36	11	32	30	20	150	58	25	18	7	6	12	98	26	39	20	33	35	36	38	15
Ex45-T1-9_contig.fa_viral_26	4	0	0	8	0	3	4	4	169	11	12	5	0	1	0	0	1	10	5	2	1	2	23	6
Ex45-T1-9_contig.fa_viral_27	0	1	2	0	1	4	2	2	125	23	10	2	0	0	0	0	0	1	4	1	1	0	0	1
Ex45-T1-9_contig.fa_viral_28	0	2	6	25	4	19	15	7	380	27	26	17	0	0	0	9	1	4	3	27	119	7	3	0
Ex45-T1-9_contig.fa_viral_29	2	4	2	15	0	21	4	3	123	11	5	4	0	0	0	13	0	12	8	11	21	12	10	4
Ex45-T1-9_contig.fa_viral_30	0	0	1	6	0	5	19	2	101	10	8	1	0	0	0	9	0	4	0	5	33	3	0	1
Ex45-T1-9_contig.fa_viral_31	1	2	1	12	3	20	7	5	142	7	5	10	0	0	0	15	0	24	4	8	11	15	18	4
Ex45-T1-9_contig.fa_viral_32	0	0	0	0	0	0	4	0	103	20	12	0	0	0	0	0	0	0	0	0	0	3	0	0
Ex45-T1-9_contig.fa_viral_33	1	6	3	11	7	41	16	2	104	38	12	6	0	0	0	36	10	32	0	15	29	9	8	7
Ex45-T1-9_contig.fa_viral_34	0	4	2	17	1	21	13	3	161	2	1	0	0	0	0	2	0	15	0	0	1	4	8	2
Ex45-T1-9_contig.fa_viral_35	0	3	9	13	3	12	15	13	73	17	8	8	0	0	0	33	3	8	14	7	22	5	6	2
Ex45-T1-9_contig.fa_viral_36	11	26	20	47	7	32	21	39	48	2	7	7	0	0	0	19	0	3	59	31	57	29	35	19
Ex45-T1-9_contig.fa_viral_37	2	4	1	2	0	3	10	19	77	5	2	2	0	0	0	0	0	0	0	8	1	3	0	5
Ex45-T1-9_contig.fa_viral_38	15	37	37	15	4	29	75	75	68	6	4	4	2	1	1	1	3	2	104	113	68	28	37	28
Ex45-T1-9_contig.fa_viral_39	0	1	0	1	0	1	0	1	120	25	10	2	0	0	0	26	0	15	0	0	0	1	0	0
Ex45-T1-9_contig.fa_viral_40	1	2	1	21	0	6	8	9	85	5	1	0	0	0	0	10	0	5	1	2	5	10	7	4
Ex45-T1-9_contig.fa_viral_41	0	2	9	9	2	9	12	20	145	7	1	5	0	0	0	7	0	3	3	13	81	7	5	3
Ex45-T1-9_contig.fa_viral_42	0	3	1	23	1	9	8	8	81	2	2	1	0	0	0	0	0	0	6	7	13	10	11	1
Ex45-T1-9_contig.fa_viral_43	3	17	4	16	14	83	16	31	60	5	2	0	0	2	0	0	0	0	6	22	25	27	34	22
Ex45-T1-9_contig.fa_viral_44	16	29	11	80	10	56	67	55	142	58	27	25	0	1	1	123	20	57	63	53	100	68	83	40
Ex45-T1-9_contig.fa_viral_45	116	81	30	73	22	71	65	38	96	74	89	151	19	22	5	136	256	153	73	26	39	46	225	106
Ex45-T1-9_contig.fa_viral_46	0	2	1	32	3	28	7	4	192	17	3	1	0	0	0	14	6	23	1	1	3	9	10	2
Ex45-T1-9_contig.fa_viral_47	2	0	0	10	0	5	2	0	69	0	0	1	0	0	0	0	4	7	0	0	0	1	5	0
Ex45-T1-9_contig.fa_viral_48	2	1	0	8	1	4	6	2	99	3	4	2	0	0	0	4	0	2	0	6	4	3	2	1
SC-T1-3_contig.fa_viral_4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	168	0	0	0	0	0
SC-T1-3_contig.fa_viral_5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	513	0	0	0	0	0
SC-T1-3_contig.fa_viral_6	0	3	1	0	0	0	0	2	1	0	0	0	0	0	0	1	1	0	103	12	134	1	2	5
SC-T1-3_contig.fa_viral_8	43	123	193	91	28	137	201	265	24	14	11	8	7	2	0	7	8	9	135	112	43	117	275	173
SC-T1-3_contig.fa_viral_9	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	69	0	0	0	0	0
SC-T1-3_contig.fa_viral_10	3	4	1	3	2	5	3	1	4	2	3	3	7	5	1	6	0	1	90	4	3	1	8	2
SC-T1-3_contig.fa_viral_11	355	225	129	158	111	221	130	163	183	201	1780	256	167	141	177	336	258	135	668	234	247	153	467	249
SC-T1-3_contig.fa_viral_12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	0	0	0	0	0
SC-T1-3_contig.fa_viral_13	0	0	0	1	0	0	0	6	1	0	2	2	0	0	0	0	0	0	128	0	3	0	4	0
SC-T1-3_contig.fa_viral_14	0	0	0	0	3	0	0	0	0	0	2	0	0	0	1	0	0	0	216	0	0	0	0	0
SC-T1-3_contig.fa_viral_15	5	3	22	1	25	14	4	4	4	2	1	0	9	11	4	0	2	3	69	11	12	9	7	4
SC-T1-3_contig.fa_viral_16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	100	0	0	0	0	0
SC-T1-3_contig.fa_viral_17	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	74	0	0	0	0	0
SC-T1-3_contig.fa_viral_18	5	124	332	22	19	118	39	112	0	0	0	0	0	0	0	0	0	0	166	87	30	91	54	34
SC-T1-3_contig.fa_viral_19	10	11	3	6	5	16	8	9	9	12	13	3	1	0	2	23	8	3	84	9	10	9	14	10
SC-T1-3_contig.fa_viral_20	2	5	12	0	14	4	12	19	0	0	0	0	1	0	0	0	0	0	357	37	10	2	1	3
SC-T1-3_contig.fa_viral_21	14	101	335	26	10	99	37	111	0	0	0	0	0	0	0	0	0	0	181	87	28	76	53	40
SC-T1-3_contig.fa_viral_22	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	108	6	1	0	0	0
SC-T1-3_contig.fa_viral_23	3	17	15	11	12	51	9	18	25	6	6	4	1	1	0	7	4	1	140	42	21	13	29	22
SC-T1-3_contig.fa_viral_24	19	92	186	58	28	155	95	94	72	12	3	2	13	8	6	16	2	4	65	34	9	40	76	61
SC-T1-3_contig.fa_viral_25	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	178	0	0	0	0	0
SC-T1-3_contig.fa_viral_27	2	59	205	12	3	22	13	73	0	0	0	0	0	0	0	0	0	0	113	49	26	33	30	12
SC-T1-3_contig.fa_viral_28	0	0	1	1	3	0	0	0	0	0	1	0	2	0	0	0	1	0	74	1	1	1	2	0
SC-T1-3_contig.fa_viral_29	7	8	2	3	6	7	6	4	6	8	5	2	5	2	10	5	0	5	60	8	4	11	10	8
SC-T1-3_contig.fa_viral_30	31	35	30	35	10	39	69	78	29	10	6	9	6	0	2	14	16	17	129	70	54	42	95	40
SC-T1-3_contig.fa_viral_31	7	38	45	41	58	43	12	32	16	4	17	5	8	25	10	7	8	5	115	8	3	30	37	19
SC-T1-3_contig.fa_viral_32	5	18	16	12	2	15	7	22	3	12	9	14	17	4	17	27	27	21	509	13	15	23	27	25
SC-T1-3_contig.fa_viral_33	63	98	79	109	66	127	70	93	87	106	104	64	73	51	64	108	34	44	248	98	86	74	111	92
SC-T1-3_contig.fa_viral_34	0	0	1	0	3	0	0	0	0	0	0	0	0	1	2	0	0	0	289	0	0	0	0	0
SC-T1-3_contig.fa_viral_35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	431	2	0	0	0	0
SC-T1-3_contig.fa_viral_36	2	10	16	7	13	12	2	3	1	0	1	0	14	2	0	0	0	0	85	0	0	2	3	3
SC-T1-3_contig.fa_viral_37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	60	6	27	0	0	0
SC-T1-3_contig.fa_viral_38	8	6	10	6	2	2	35	30	2	0	0	0	0	1	0	0	0	0	67	38	12	32	31	25
SC-T1-3_contig.fa_viral_39	2	3	4	3	8	8	2	4	3	1	1	1	6	2	4	1	6	3	189	1	0	2	4	4
SC-T1-3_contig.fa_viral_41	0	5	30	0	6	2	2	19	5	0	0	0	1	11	1	0	0	0	120	10	3	2	4	4
SC-T1-3_contig.fa_viral_42	0	10	38	4	2	4	49	105	13	10	15	19	0	0	0	18	0	6	69	50	97	45	29	9
SC-T1-3_contig.fa_viral_43	2	18	56	9	10	19	15	24	0	0	0	0	0	0	0	0	0	0	101	42	14	13	26	24
SC-T1-3_contig.fa_viral_44	8	68	231	20	14	72	29	120	0	0	0	0	0	0	0	0	0	0	110	50	21	78	57	30
SC-T1-3_contig.fa_viral_45	4	44	136	10	3	51	20	75	0	0	0	0	0	0	0	0	0	0	89	40	12	28	21	34
SC-T1-3_contig.fa_viral_47	0	0	0	0	0	0	0	0	1	0	16	0	0	0	0	0	0	0	69	9	17	0	0	0
SC-T1-3_contig.fa_viral_48	8	34	146	1	6	33	15	56	0	0	0	0	0	0	0	0	0	0	92	45	22	45	21	17
SC-T1-3_contig.fa_viral_49	11	12	25	14	3	10	9	14	5	9	7	2	26	30	18	16	7	10	186	16	11	17	19	32
SC-T1-3_contig.fa_viral_50	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	297	0	0	0	0	0
SC-T1-3_contig.fa_viral_51	4	8	63	7	20	23	15	42	0	0	0	0	0	0	0	0	0	0	131	37	12	42	25	14
SC-T1-3_contig.fa_viral_52	0	0	5	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	345	0	0	0	0	0
SC-T1-3_contig.fa_viral_53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	93	1	0	0	0	0
SC-T1-3_contig.fa_viral_54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	112	0	0	0	0	0
SC-T1-3_contig.fa_viral_55	0	4	11	6	10	4	0	0	1	0	0	0	0	0	0	0	0	0	105	2	1	0	0	6
SC-T1-3_contig.fa_viral_56	4	14	5	16	2	14	16	18	24	3	1	2	0	0	0	41	10	9	103	123	240	15	18	6
SC-T1-3_contig.fa_viral_57	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	144	0	0	0	0	0
SC-T1-3_contig.fa_viral_58	7	21	6	60	12	17	183	159	54	10	7	4	0	0	0	18	2	4	62	122	279	145	139	36
SC-T1-3_contig.fa_viral_59	1	12	14	9	4	10	32	92	3	16	4	15	0	0	0	47	3	12	71	55	93	17	15	10
SC-T1-3_contig.fa_viral_60	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	167	0	0	0	0	0
SC-T1-3_contig.fa_viral_61	2	8	1	9	0	0	5	6	7	1	0	0	0	0	0	1	0	1	149	141	236	8	8	5
SC-T1-3_contig.fa_viral_62	3	15	8	14	3	15	19	20	16	23	3	9	0	0	0	25	10	6	94	88	150	18	22	11
SC-T1-3_contig.fa_viral_63	0	0	0	1	0	0	2	0	1	0	0	0	1	2	0	1	0	1	78	0	1	0	0	0
SC-T1-3_contig.fa_viral_64	0	0	1	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	192	4	0	2	0	4
SC-T1-3_contig.fa_viral_65	0	2	1	24	2	8	24	19	23	42	17	13	0	0	0	50	4	27	81	30	37	11	14	0
SC-T1-3_contig.fa_viral_66	0	2	0	10	1	7	10	17	8	6	17	11	0	0	0	68	12	21	159	165	278	11	16	2
SC-T1-3_contig.fa_viral_67	11	31	45	22	7	36	49	54	15	0	1	9	8	0	1	0	1	0	81	92	41	41	37	17
SC-T1-3_contig.fa_viral_68	7	26	15	69	7	31	140	101	76	38	48	42	3	4	2	64	2	7	86	89	169	155	95	43
SC-T1-3_contig.fa_viral_69	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	0	0	0	0	0
SC-T1-3_contig.fa_viral_70	15	74	107	40	17	26	43	101	24	9	4	10	12	6	3	16	12	9	82	87	52	30	56	31
SC-T1-3_contig.fa_viral_71	1	10	56	15	38	57	19	46	2	7	6	0	22	28	17	2	0	0	405	45	18	30	25	12
SC-T1-3_contig.fa_viral_72	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	202	0	0	0	0	0
RP-T1-3_contig.fa_viral_185	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	273	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_186	0	1	4	10	0	10	4	5	9	21	3	6	0	0	0	281	44	36	14	12	28	5	7	2
RP-T1-3_contig.fa_viral_187	0	0	0	1	1	0	0	0	0	17	4	90	0	0	0	114	22	19	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_188	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	138	30	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_189	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	132	0	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_190	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	112	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_191	6	8	35	16	3	9	5	7	6	6	3	8	6	2	0	130	16	12	16	9	4	6	6	2
RP-T1-3_contig.fa_viral_192	0	0	0	0	0	0	0	0	2	7	0	0	0	0	0	119	2	11	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_193	8	15	10	7	6	8	17	17	6	8	6	13	7	5	2	96	9	14	24	21	20	9	16	6
RP-T1-3_contig.fa_viral_194	0	0	0	0	0	0	0	0	1	1	0	2	0	0	0	74	2	18	1	0	0	1	0	0
RP-T1-3_contig.fa_viral_195	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	126	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_196	0	0	0	1	0	0	1	0	1	50	22	29	0	0	0	220	0	11	0	3	4	0	1	0
RP-T1-3_contig.fa_viral_197	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	124	0	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_198	0	0	0	0	0	0	0	0	0	3	1	8	0	0	0	84	17	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_199	0	1	2	2	0	4	3	0	9	28	23	7	0	0	0	100	0	14	1	4	8	3	4	0
RP-T1-3_contig.fa_viral_200	0	3	0	1	1	2	0	0	17	98	191	14	0	0	0	179	0	9	1	3	7	0	1	0
RP-T1-3_contig.fa_viral_201	0	1	0	1	0	1	0	4	25	9	14	20	0	0	0	154	0	20	0	12	21	0	1	1
RP-T1-3_contig.fa_viral_202	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	318	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_203	8	15	4	6	4	11	1	6	25	12	7	3	0	1	6	246	9	13	1	9	3	6	8	8
RP-T1-3_contig.fa_viral_204	0	0	0	1	0	0	0	0	1	10	1	1	0	0	0	190	3	34	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_205	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	138	72	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_206	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	412	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_207	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	389	97	58	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_208	6	4	1	0	0	1	8	1	4	18	3	31	0	0	0	181	410	220	8	0	2	3	8	5
RP-T1-3_contig.fa_viral_209	0	1	2	0	0	2	0	0	0	0	0	1	0	0	0	72	0	1	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_210	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	144	37	26	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_211	26	24	28	13	17	40	12	15	47	63	119	179	17	22	23	668	55	69	20	27	21	22	36	17
RP-T1-3_contig.fa_viral_212	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	57	3	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_213	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	76	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_214	3	15	6	11	4	3	30	21	30	83	15	22	0	0	0	336	9	106	12	21	43	37	32	11
RP-T1-3_contig.fa_viral_215	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	213	28	40	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_216	1	0	0	3	0	0	0	0	1	2	1	2	0	0	0	116	15	13	1	4	4	2	0	0
RP-T1-3_contig.fa_viral_217	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_218	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	148	4	33	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_219	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	125	25	27	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_220	0	0	0	0	0	1	0	0	0	20	9	55	0	0	0	72	2	3	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_221	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	77	51	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_222	0	0	0	0	0	0	0	0	0	0	11	1	0	0	0	102	52	0	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_223	0	0	0	0	1	1	0	0	4	256	59	1	0	0	0	134	1	0	0	0	3	0	0	0
RP-T1-3_contig.fa_viral_224	0	2	0	0	0	0	0	1	0	12	4	2	0	0	0	81	1	27	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_225	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	97	2	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_226	3393	3259	2059	2666	1506	2403	1718	1949	1753	2954	3450	4340	2017	1374	1316	4972	6415	3941	2934	2177	2075	1861	5336	2807
RP-T1-3_contig.fa_viral_227	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	143	2	6	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_228	1	0	0	2	3	3	4	2	8	19	30	25	0	1	0	351	77	27	4	4	11	2	5	1
RP-T1-3_contig.fa_viral_229	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	66	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_230	0	2	1	0	1	2	2	2	0	49	56	51	0	0	0	235	5	9	5	4	7	3	2	3
RP-T1-3_contig.fa_viral_231	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_232	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	149	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_233	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	105	0	5	1	0	0	0	4	0
RP-T1-3_contig.fa_viral_234	0	0	0	0	0	0	0	0	0	67	5	0	0	0	0	88	0	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_235	1	0	2	2	0	0	9	5	3	16	9	22	1	0	0	111	194	86	26	8	11	1	26	3
RP-T1-3_contig.fa_viral_236	0	0	0	0	0	0	0	0	0	4	0	4	0	0	0	76	22	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_237	71	65	45	51	32	102	39	57	67	75	86	45	45	34	29	267	93	60	62	67	60	52	108	66
RP-T1-3_contig.fa_viral_238	0	0	0	1	1	1	0	0	4	7	4	0	0	0	0	109	0	16	0	1	0	0	1	0
RP-T1-3_contig.fa_viral_239	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	90	11	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_240	1	0	0	1	0	0	0	0	0	7	18	11	1	0	0	111	3	0	3	3	0	2	0	2
RP-T1-3_contig.fa_viral_241	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	115	2	33	0	1	0	0	0	1
RP-T1-3_contig.fa_viral_242	1	0	2	6	1	4	1	1	28	71	3	2	0	0	0	100	8	90	3	0	0	1	1	1
RP-T1-3_contig.fa_viral_244	2	2	0	3	1	0	5	2	4	19	24	33	0	0	0	117	3	10	1	11	13	2	6	1
RP-T1-3_contig.fa_viral_245	5	7	3	18	3	5	5	4	26	66	64	37	4	3	1	268	169	61	25	12	11	11	9	9
RP-T1-3_contig.fa_viral_246	0	0	1	0	0	0	2	2	6	8	4	4	0	0	0	202	10	6	1	2	6	0	0	0
RP-T1-3_contig.fa_viral_247	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	78	19	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_248	0	0	0	0	0	0	0	0	0	13	18	32	0	0	0	169	77	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_249	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	117	25	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_250	9	0	0	0	0	0	0	0	3	3	0	3	0	0	0	145	6	0	4	0	0	0	2	0
RP-T1-3_contig.fa_viral_251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77	1	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_252	0	0	0	0	0	0	0	1	15	125	29	7	0	0	0	985	4	192	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_253	0	0	0	0	1	0	0	0	4	35	3	0	0	0	0	83	5	65	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_254	2	0	0	2	0	2	1	0	9	8	5	3	1	2	0	73	6	10	2	3	3	1	4	7
RP-T1-3_contig.fa_viral_255	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	44	1	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_256	0	0	2	0	0	0	1	1	5	12	3	0	0	0	0	221	8	34	1	2	0	0	1	2
RP-T1-3_contig.fa_viral_257	16	16	5	12	4	8	34	25	17	15	7	9	1	0	0	65	108	81	32	13	17	10	67	13
RP-T1-3_contig.fa_viral_258	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	105	46	29	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_259	0	0	0	2	1	1	1	1	0	6	8	2	1	0	1	75	6	6	1	2	1	2	4	1
RP-T1-3_contig.fa_viral_260	0	1	1	0	1	1	0	0	0	1	1	4	0	2	1	167	23	61	1	0	0	0	0	1
HP-T1-9_contig.fa_viral_368	1	0	0	0	0	0	0	0	0	3	14	59	0	1	0	9	29	2	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_369	0	0	0	0	0	0	0	0	0	19	4	108	0	0	0	2	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_370	1	2	1	2	1	2	2	5	0	9	15	130	1	0	1	49	123	39	4	4	2	4	10	9
HP-T1-9_contig.fa_viral_371	0	0	0	0	0	0	0	0	0	0	0	89	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_372	0	0	0	0	0	0	0	0	0	0	43	115	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_373	0	0	0	0	0	0	0	0	0	0	0	76	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_374	0	0	0	0	0	0	0	0	0	0	0	180	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_375	0	0	0	1	0	0	0	0	0	0	0	205	0	0	0	2	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_376	1	2	0	1	0	0	1	0	0	4	25	130	0	2	0	3	7	5	0	0	0	3	2	0
HP-T1-9_contig.fa_viral_377	5	0	0	0	0	0	1	0	1	29	53	151	0	1	0	40	180	56	8	0	2	3	10	5
HP-T1-9_contig.fa_viral_378	1	0	0	0	0	0	0	0	1	12	40	153	0	0	0	33	36	28	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_379	0	0	0	0	0	0	0	0	0	56	31	118	0	0	0	342	19	24	1	0	0	1	0	1
HP-T1-9_contig.fa_viral_381	64	63	45	51	28	59	51	37	19	61	88	182	18	21	8	123	321	148	128	62	47	34	190	85
HP-T1-9_contig.fa_viral_382	0	0	0	0	0	1	0	0	0	2	7	99	1	0	0	18	31	4	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_383	5	4	0	3	0	4	2	0	0	4	18	152	5	2	1	16	42	22	5	3	4	1	4	2
HP-T1-9_contig.fa_viral_384	3	2	7	2	1	3	7	12	5	1	12	111	1	0	2	23	1	2	14	11	11	2	11	2
HP-T1-9_contig.fa_viral_385	4	6	6	9	9	24	11	6	12	27	24	82	7	11	5	5	7	6	11	7	5	17	24	12
HP-T1-9_contig.fa_viral_386	0	0	0	0	0	0	0	0	0	0	2	917	0	0	0	0	1	0	1	0	0	0	1	0
HP-T1-9_contig.fa_viral_387	1	0	0	0	0	0	0	0	0	2	22	80	0	0	0	5	5	4	0	0	1	1	1	1
HP-T1-9_contig.fa_viral_388	15	18	6	7	5	9	2	6	5	5	50	98	1	2	1	29	51	24	7	2	2	8	15	9
HP-T1-9_contig.fa_viral_389	1	0	0	0	0	0	0	0	0	0	0	101	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_390	1	2	0	0	0	2	0	0	0	0	0	272	1	0	2	0	0	1	0	1	0	0	1	0
HP-T1-9_contig.fa_viral_391	0	0	0	0	0	0	0	0	0	0	0	105	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_392	0	0	0	0	0	0	0	0	0	0	0	70	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_393	0	0	0	0	0	0	0	0	0	0	46	193	1	0	1	1	0	0	0	1	0	0	0	0
RP-T1-3_contig.fa_viral_104	5	3	0	2	1	3	5	5	1	7	3	17	9	1	0	196	294	217	1	2	5	0	11	7
RP-T1-3_contig.fa_viral_105	0	0	0	0	0	0	0	0	0	3	0	1	0	1	0	85	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_107	6	1	0	1	3	3	3	2	1	6	9	10	0	0	0	1171	2	8	3	2	3	1	2	1
RP-T1-3_contig.fa_viral_108	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	145	56	20	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_110	0	0	0	0	0	0	0	0	0	0	13	2	0	0	0	81	13	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_111	0	1	3	5	0	5	2	2	2	3	2	3	0	0	0	118	7	7	2	10	10	2	1	1
RP-T1-3_contig.fa_viral_112	0	0	0	0	0	0	0	0	0	5	11	5	0	0	0	142	0	22	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_113	0	0	0	0	0	2	0	0	0	8	1	2	0	0	0	199	7	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_114	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	92	2	0	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_115	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	85	25	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_116	65	81	37	63	13	25	98	79	77	43	32	85	9	6	0	247	447	261	67	33	29	43	207	63
RP-T1-3_contig.fa_viral_119	0	5	1	1	1	0	0	1	2	2	0	0	0	0	5	62	5	1	2	0	1	1	3	0
RP-T1-3_contig.fa_viral_120	2	0	2	1	1	0	3	5	18	52	7	7	0	0	0	146	11	84	0	5	13	0	0	0
RP-T1-3_contig.fa_viral_121	0	0	0	0	0	1	0	1	0	43	77	94	0	0	0	126	5	15	0	1	1	1	1	0
RP-T1-3_contig.fa_viral_123	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_124	6	3	0	0	5	2	1	2	10	47	16	1	0	0	2	103	6	22	0	0	0	1	0	0
RP-T1-3_contig.fa_viral_125	4	3	0	8	0	8	4	7	11	17	9	9	0	0	0	542	134	49	9	6	10	6	6	3
RP-T1-3_contig.fa_viral_126	5	3	4	12	3	19	11	5	36	6	23	3	0	0	1	209	5	38	3	12	15	4	13	8
RP-T1-3_contig.fa_viral_127	0	4	1	0	0	0	2	0	36	67	13	23	2	1	0	153	27	119	1	1	2	0	3	1
RP-T1-3_contig.fa_viral_128	0	3	1	11	2	5	23	11	26	70	7	18	0	0	0	371	9	90	4	13	27	17	12	0
RP-T1-3_contig.fa_viral_129	0	1	0	0	0	0	0	0	0	0	0	10	0	0	0	156	51	21	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_130	0	0	0	0	0	0	1	0	1	19	11	22	0	0	0	305	16	52	0	0	0	2	3	0
RP-T1-3_contig.fa_viral_131	1	6	5	18	3	15	14	10	73	78	9	15	0	0	0	201	22	172	11	15	13	11	14	3
RP-T1-3_contig.fa_viral_132	5	6	2	3	0	1	14	6	13	19	10	44	1	0	0	60	124	56	7	3	2	7	28	4
RP-T1-3_contig.fa_viral_133	1	0	0	0	1	0	0	0	0	24	1	3	0	0	0	101	46	16	2	0	1	0	0	0
RP-T1-3_contig.fa_viral_134	1	33	56	14	6	14	16	46	22	15	21	7	13	9	5	216	38	55	31	28	11	23	29	18
RP-T1-3_contig.fa_viral_135	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	118	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_136	1	1	1	1	3	1	1	0	3	15	3	1	4	1	1	86	4	3	2	1	0	0	0	1
RP-T1-3_contig.fa_viral_137	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	238	7	15	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_138	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	66	20	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_139	0	3	2	3	0	11	16	12	34	36	86	50	0	0	0	145	0	32	4	36	69	5	4	0
RP-T1-3_contig.fa_viral_140	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	125	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_141	0	0	0	0	0	1	0	1	8	14	30	18	0	0	0	115	0	10	0	2	0	0	0	0
RP-T1-3_contig.fa_viral_142	0	1	1	1	0	3	0	1	1	30	10	8	2	0	1	114	24	61	5	2	0	0	1	2
RP-T1-3_contig.fa_viral_143	0	0	0	1	0	0	0	0	0	49	1	3	0	1	0	108	4	2	0	0	1	0	2	0
RP-T1-3_contig.fa_viral_144	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	85	10	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_145	1	4	2	3	2	3	2	1	15	84	52	35	0	0	0	609	85	92	1	1	2	5	5	2
RP-T1-3_contig.fa_viral_146	8	18	5	17	1	11	12	21	19	41	14	11	0	0	0	82	9	19	53	14	16	30	33	15
RP-T1-3_contig.fa_viral_147	0	0	0	0	0	1	0	0	69	122	17	6	0	0	0	507	2	93	0	1	1	0	0	0
RP-T1-3_contig.fa_viral_148	0	0	0	0	0	0	0	0	0	1	1	3	0	0	0	576	97	20	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_149	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	222	1	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_150	0	1	1	0	0	1	5	5	2	20	8	12	0	0	0	348	41	23	2	2	8	1	1	3
RP-T1-3_contig.fa_viral_151	2	1	2	0	0	0	0	0	2	11	1	4	0	0	0	94	2	3	0	2	4	1	3	1
RP-T1-3_contig.fa_viral_152	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	454	185	134	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_153	1	1	1	2	0	6	4	4	20	126	25	49	0	0	0	303	28	37	6	17	19	7	4	1
RP-T1-3_contig.fa_viral_154	1	2	0	2	0	0	0	0	0	1	0	0	0	0	0	67	7	11	1	0	0	0	1	0
RP-T1-3_contig.fa_viral_155	0	2	1	5	0	3	7	6	9	11	2	0	0	0	0	161	23	8	15	8	9	8	4	3
RP-T1-3_contig.fa_viral_156	0	0	0	4	0	4	0	1	22	114	10	12	0	0	0	304	24	177	1	1	1	1	5	0
RP-T1-3_contig.fa_viral_157	1	3	1	7	0	1	18	7	46	134	29	21	0	0	0	419	6	147	8	5	12	9	13	5
RP-T1-3_contig.fa_viral_158	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	256	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_159	6	6	2	19	3	11	23	31	25	59	66	31	0	0	0	174	9	26	27	29	47	23	27	12
RP-T1-3_contig.fa_viral_160	0	0	0	0	0	0	0	0	0	3	3	5	0	0	0	167	6	25	0	0	0	1	0	0
SC-T1-6_contig.fa_viral_104	1	7	1	2	6	45	21	33	13	0	2	0	0	0	0	0	0	1	19	436	42	9	25	13
SC-T1-6_contig.fa_viral_105	6	28	24	22	41	112	30	43	30	3	16	1	1	3	0	7	1	6	33	91	71	40	75	51
SC-T1-6_contig.fa_viral_106	0	0	0	0	0	0	6	2	9	6	5	11	0	0	0	11	0	5	4	69	105	2	1	0
SC-T1-6_contig.fa_viral_107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	59	1	0	0	2
SC-T1-6_contig.fa_viral_108	1	0	1	0	0	1	0	2	0	0	0	1	0	0	0	0	0	0	15	124	2	1	1	0
SC-T1-6_contig.fa_viral_109	8	31	11	61	5	33	186	118	79	12	6	12	0	0	0	50	1	17	46	129	211	161	129	34
SC-T1-6_contig.fa_viral_110	0	2	1	0	1	2	0	1	0	0	6	4	1	0	0	0	0	0	1	108	14	5	1	3
SC-T1-6_contig.fa_viral_111	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	92	52	0	0	0
SC-T1-6_contig.fa_viral_112	1	1	8	0	0	3	0	1	0	0	1	0	0	0	0	0	0	0	11	92	0	2	0	0
SC-T1-6_contig.fa_viral_113	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	208	0	0	0	0
SC-T1-6_contig.fa_viral_114	8	14	20	2	0	5	59	112	1	0	0	0	0	0	0	0	0	0	66	169	104	24	18	12
SC-T1-6_contig.fa_viral_115	11	31	33	64	7	32	174	115	96	81	38	54	1	0	0	214	20	59	61	145	183	127	133	64
SC-T1-6_contig.fa_viral_116	7	64	27	41	33	206	44	62	72	10	21	1	6	5	5	3	2	6	24	249	72	57	120	66
SC-T1-6_contig.fa_viral_117	4	10	4	0	0	0	5	49	1	0	0	0	0	0	0	0	0	0	9	62	78	17	13	11
SC-T1-6_contig.fa_viral_120	5	22	25	13	3	34	54	52	82	12	9	24	0	2	0	15	5	29	5	140	132	90	48	21
SC-T1-6_contig.fa_viral_121	0	0	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	5	88	0	1	0	0
SC-T1-6_contig.fa_viral_122	10	30	68	9	2	19	113	201	18	4	1	2	2	1	0	17	2	3	99	265	135	31	34	20
SC-T1-6_contig.fa_viral_124	0	1	0	0	1	3	0	0	0	0	0	0	0	0	0	2	1	0	17	147	0	2	1	0
SC-T1-6_contig.fa_viral_125	8	75	154	31	20	48	50	116	15	9	4	11	21	5	5	17	10	19	51	119	30	24	35	26
SC-T1-6_contig.fa_viral_126	0	10	1	2	8	30	4	10	16	6	5	0	0	0	0	0	0	0	20	191	11	4	16	9
SC-T1-6_contig.fa_viral_127	0	4	3	1	1	3	4	17	0	0	0	0	0	1	0	0	0	0	29	71	23	4	0	3
SC-T1-6_contig.fa_viral_128	15	14	21	12	2	15	69	140	10	6	9	9	1	1	4	9	11	7	151	270	166	29	29	16
SC-T1-6_contig.fa_viral_129	8	64	71	38	43	49	23	64	23	24	53	7	31	24	31	28	2	7	89	210	207	69	47	48
SC-T1-6_contig.fa_viral_130	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	958	0	0	0	0
SC-T1-6_contig.fa_viral_131	52	170	136	85	20	170	199	286	69	19	30	52	11	8	4	31	19	19	135	224	76	100	285	129
SC-T1-6_contig.fa_viral_132	1	2	3	3	6	42	9	11	8	0	0	0	1	0	5	3	1	1	0	2120	14	5	7	9
SC-T1-6_contig.fa_viral_133	14	7	5	8	0	4	2	10	1	8	10	42	0	3	0	28	135	79	29	120	2	10	22	31
SC-T1-6_contig.fa_viral_134	0	4	1	4	1	7	18	15	10	2	13	8	0	0	0	5	1	5	5	203	290	12	8	3
SC-T1-6_contig.fa_viral_135	0	3	1	0	0	2	1	1	0	2	0	1	0	0	1	0	0	0	5	138	81	0	1	0
SC-T1-6_contig.fa_viral_136	0	3	2	2	4	9	55	41	20	5	13	7	0	0	0	14	0	2	6	215	297	16	10	1
SC-T1-6_contig.fa_viral_137	4	11	2	30	0	33	142	62	41	20	5	8	0	0	0	26	3	7	32	86	125	69	109	43
SC-T1-6_contig.fa_viral_138	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	105	0	0	0	0
SC-T1-6_contig.fa_viral_139	7	12	2	9	1	3	10	11	7	2	2	7	0	2	1	12	1	2	77	75	99	12	6	4
SC-T1-6_contig.fa_viral_140	0	0	0	0	1	1	4	0	2	0	8	13	0	0	0	17	2	1	2	75	80	1	2	3
SC-T1-6_contig.fa_viral_141	63	136	48	252	32	174	350	297	423	294	179	248	0	0	0	829	118	195	323	476	712	320	270	139
SC-T1-6_contig.fa_viral_142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	94	0	0	0	0
SC-T1-6_contig.fa_viral_143	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	84	0	0	0	0
SC-T1-6_contig.fa_viral_144	96	211	162	203	170	244	119	153	159	194	209	140	100	95	82	272	46	81	202	250	191	149	230	127
SC-T1-6_contig.fa_viral_145	64	78	79	67	39	60	74	98	67	69	105	84	35	21	23	213	78	91	109	216	268	70	124	68
SC-T1-6_contig.fa_viral_146	0	4	6	0	0	1	11	45	1	1	1	1	0	0	0	1	0	0	190	94	44	7	8	16
SC-T1-6_contig.fa_viral_147	0	2	2	1	0	0	8	23	0	0	0	0	0	0	0	0	0	0	47	87	47	11	6	5
SC-T1-6_contig.fa_viral_148	5	18	19	7	1	8	115	198	3	0	0	0	0	0	0	2	0	0	236	450	322	44	21	17
SC-T1-6_contig.fa_viral_149	0	0	0	0	1	4	0	1	1	0	0	0	0	0	0	0	0	0	0	273	4	0	0	1
SC-T1-6_contig.fa_viral_150	9	37	20	18	28	104	32	37	52	14	22	9	7	7	9	34	7	8	24	136	58	29	75	69
SC-T1-6_contig.fa_viral_151	14	29	47	12	10	27	26	37	14	3	4	11	4	4	1	6	6	2	28	44	12	23	39	18
SC-T1-6_contig.fa_viral_153	0	0	0	1	6	14	6	2	3	4	0	0	0	1	0	0	0	0	2	511	27	5	4	5
SC-T1-6_contig.fa_viral_154	7	86	158	38	11	30	47	144	5	3	3	0	25	12	7	5	2	7	94	98	45	46	47	46
SC-T1-6_contig.fa_viral_155	1	2	6	1	0	2	1	2	0	2	1	1	1	1	4	2	1	1	6	116	0	0	1	0
SC-T1-9_contig.fa_viral_212	0	4	10	0	2	7	7	26	5	10	14	6	1	1	0	40	6	7	35	47	69	10	5	5
SC-T1-9_contig.fa_viral_213	27	143	150	92	47	168	71	60	83	18	8	8	35	44	24	31	2	8	66	111	64	43	57	72
SC-T1-9_contig.fa_viral_214	0	0	0	0	0	0	0	0	4	3	0	2	0	0	0	1	0	0	0	55	119	0	2	0
SC-T1-9_contig.fa_viral_215	0	2	2	1	1	2	8	7	0	0	0	0	0	0	0	0	0	0	1	296	205	3	3	0
SC-T1-9_contig.fa_viral_216	8	11	3	2	0	0	7	47	0	0	0	0	0	0	0	0	0	0	7	89	184	28	18	11
SC-T1-9_contig.fa_viral_217	6	24	10	35	14	43	44	53	117	35	27	34	0	0	0	114	19	37	103	139	192	46	41	24
SC-T1-9_contig.fa_viral_218	4	19	20	24	4	20	20	21	11	4	4	2	3	5	3	6	1	4	76	257	85	11	30	21
SC-T1-9_contig.fa_viral_219	0	1	1	4	2	9	49	11	7	2	1	8	0	0	0	14	0	0	6	101	135	3	3	0
SC-T1-9_contig.fa_viral_220	71	161	110	121	86	161	97	122	127	137	161	111	38	55	53	214	97	92	145	285	317	133	186	122
SC-T1-9_contig.fa_viral_221	1	2	3	1	2	1	0	4	0	0	6	2	0	0	0	0	0	0	0	40	116	2	4	2
SC-T1-9_contig.fa_viral_222	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	9	85	0	0	0
UAB-T1-3_contig.fa_provirus_1	5	5	1	6	4	2	3	3	1	1	3	4	2	1	1	4	4	4	20	5	13	41	6	2
UAB-T1-3_contig.fa_provirus_2	0	5	3	14	0	9	49	25	10	5	0	2	0	0	0	10	2	2	11	16	25	32	20	17
SC-T1-9_contig.fa_viral_25	0	11	2	12	2	4	3	4	1	3	0	4	1	0	0	2	0	2	11	44	57	5	7	5
SC-T1-9_contig.fa_viral_27	0	0	2	1	0	5	12	11	11	4	2	5	0	0	0	13	0	8	15	69	88	5	4	2
SC-T1-9_contig.fa_viral_28	0	1	1	0	0	0	3	5	12	16	9	20	0	0	0	35	1	9	7	35	86	6	1	1
SC-T1-9_contig.fa_viral_30	0	2	2	0	0	0	1	2	0	0	1	0	0	0	1	4	0	2	9	72	76	2	3	0
SC-T1-9_contig.fa_viral_31	1	3	5	15	1	6	47	27	12	1	0	1	0	0	0	7	1	1	13	72	154	26	23	11
SC-T1-9_contig.fa_viral_32	3	8	1	19	3	8	53	38	10	6	1	0	0	0	0	15	1	11	18	44	105	62	46	18
SC-T1-9_contig.fa_viral_33	1	8	1	19	0	10	14	18	24	13	4	5	0	0	0	21	3	10	126	136	174	22	10	4
SC-T1-9_contig.fa_viral_34	4	0	4	6	0	6	11	7	10	16	11	10	0	2	1	23	2	4	9	28	108	14	23	7
SC-T1-9_contig.fa_viral_35	1	1	4	3	1	2	3	11	2	0	0	0	0	0	0	0	0	0	1	31	103	4	6	2
SC-T1-9_contig.fa_viral_36	0	0	0	1	0	1	0	2	3	1	0	0	0	0	4	1	1	0	19	28	94	0	1	1
SC-T1-9_contig.fa_viral_37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	129	0	0	0
SC-T1-9_contig.fa_viral_38	0	8	3	5	2	18	11	8	13	1	2	2	0	0	0	0	0	1	8	30	68	5	9	9
SC-T1-9_contig.fa_viral_39	3	3	4	2	2	2	3	14	3	1	10	5	0	1	1	17	4	4	23	38	96	2	4	1
SC-T1-9_contig.fa_viral_40	0	0	2	0	1	6	0	2	0	0	0	0	0	0	0	0	0	0	0	19	107	0	0	1
SC-T1-9_contig.fa_viral_41	16	39	26	4	0	8	73	171	9	12	5	9	0	0	0	23	4	9	19	120	239	130	68	69
SC-T1-9_contig.fa_viral_42	3	13	19	16	11	21	26	28	28	6	8	9	1	1	2	19	1	4	7	266	361	28	25	9
SC-T1-9_contig.fa_viral_43	6	30	19	15	23	126	22	28	30	9	11	1	0	2	1	12	0	3	11	63	91	25	69	43
SC-T1-9_contig.fa_viral_44	48	52	38	38	49	123	30	43	117	62	31	36	7	39	16	33	12	13	76	96	154	145	110	63
SC-T1-9_contig.fa_viral_45	0	0	0	0	0	0	11	5	2	0	0	3	0	0	0	3	0	1	8	20	100	0	0	0
SC-T1-9_contig.fa_viral_46	0	0	0	0	0	1	2	1	0	0	0	1	0	0	0	0	0	0	3	17	68	0	2	0
SC-T1-9_contig.fa_viral_47	2	3	2	7	2	2	16	19	18	3	7	18	0	0	0	28	2	6	1	40	117	6	12	2
SC-T1-9_contig.fa_viral_48	1	3	4	2	1	5	5	9	4	0	1	0	0	0	0	3	0	0	0	31	69	9	6	2
SC-T1-9_contig.fa_viral_49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	101	0	0	0
SC-T1-9_contig.fa_viral_50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	12	76	0	0	0
SC-T1-9_contig.fa_viral_51	0	5	5	9	0	7	29	44	25	12	8	28	0	0	0	14	1	7	30	95	152	21	15	6
SC-T1-9_contig.fa_viral_52	0	0	3	2	0	1	16	8	13	13	11	22	0	0	0	60	12	17	13	75	214	11	5	1
SC-T1-9_contig.fa_viral_53	3	8	8	10	2	7	50	53	4	3	2	0	3	0	0	2	0	6	125	167	149	11	16	5
SC-T1-9_contig.fa_viral_54	7	8	7	8	2	4	29	16	12	17	15	21	2	0	2	62	23	22	25	71	121	17	20	6
SC-T1-9_contig.fa_viral_55	11	4	1	5	5	2	4	1	2	3	5	4	1	3	1	1	3	3	6	44	119	2	7	5
SC-T1-9_contig.fa_viral_56	42	109	100	78	57	113	58	76	68	71	84	42	45	53	47	98	26	39	94	209	234	103	114	67
SC-T1-9_contig.fa_viral_57	1	1	0	1	0	1	6	4	4	11	14	13	0	0	0	19	1	5	2	62	144	1	1	2
SC-T1-9_contig.fa_viral_58	1	2	0	0	0	2	3	3	4	1	2	2	0	0	0	14	1	1	0	39	82	2	4	0
SC-T1-9_contig.fa_viral_59	0	1	0	2	1	4	3	4	5	1	5	7	0	0	0	86	1	4	7	67	132	3	6	1
SC-T1-9_contig.fa_viral_60	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	35	71	1	0	0
SC-T1-9_contig.fa_viral_61	11	115	183	76	26	60	93	159	23	1	1	1	24	14	7	30	1	5	123	332	117	42	138	67
SC-T1-9_contig.fa_viral_62	7	25	52	2	0	11	33	58	4	0	1	0	0	1	2	1	0	0	11	71	93	101	37	24
SC-T1-9_contig.fa_viral_63	1	1	9	13	3	6	30	30	0	6	0	2	9	0	0	2	0	1	59	30	109	18	5	6
SC-T1-9_contig.fa_viral_64	21	21	51	17	9	27	24	50	23	16	10	10	3	11	14	10	14	6	80	92	94	19	21	21
SC-T1-9_contig.fa_viral_65	0	0	0	0	0	0	4	4	4	1	12	30	0	0	0	0	1	0	0	52	142	0	0	0
SC-T1-9_contig.fa_viral_66	1	11	20	15	12	33	56	53	4	1	3	0	0	0	0	0	0	0	0	47	71	27	22	15
SC-T1-9_contig.fa_viral_67	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	85	59	0	0	0
SC-T1-9_contig.fa_viral_68	0	1	0	2	1	4	33	23	8	9	5	4	0	0	0	15	0	2	5	117	207	8	9	0
SC-T1-9_contig.fa_viral_69	73	115	172	82	24	148	151	162	53	18	13	10	12	8	2	28	27	28	177	322	149	82	213	120
SC-T1-9_contig.fa_viral_71	1	2	2	8	2	6	9	14	9	7	1	3	0	0	0	15	2	15	12	58	76	8	6	1
SC-T1-9_contig.fa_viral_72	0	0	0	0	0	0	9	0	3	0	1	8	0	0	0	0	0	0	1	62	112	0	0	0
SC-T1-9_contig.fa_viral_74	7	8	9	14	7	13	8	4	26	27	34	28	2	6	8	44	22	14	11	35	95	9	10	12
SC-T1-9_contig.fa_viral_75	0	0	3	2	4	3	1	4	0	0	0	1	12	8	1	2	0	0	15	98	121	1	3	2
SC-T1-9_contig.fa_viral_76	10	22	21	11	6	5	9	24	6	7	8	24	14	6	7	20	18	10	40	40	88	27	33	30
SC-T1-9_contig.fa_viral_78	6	23	17	13	19	117	28	29	25	4	6	0	0	2	1	0	0	1	9	64	80	34	68	38
SC-T1-9_contig.fa_viral_79	0	0	0	1	0	0	7	1	4	5	8	29	0	0	0	26	0	2	11	49	114	1	1	0
SC-T1-9_contig.fa_viral_80	3	8	6	13	3	14	34	29	33	43	33	60	0	0	0	129	10	34	53	119	224	24	35	13
SC-T1-9_contig.fa_viral_81	0	0	0	0	0	0	7	0	2	0	0	0	0	0	0	0	0	0	3	46	64	0	0	0
SC-T1-9_contig.fa_viral_82	3	1	5	1	2	6	5	4	4	13	4	13	0	0	0	6	0	6	5	56	99	6	7	2
SC-T1-9_contig.fa_viral_83	0	6	3	3	3	5	17	14	17	2	2	4	0	0	0	2	3	3	4	110	105	23	12	9
SC-T1-9_contig.fa_viral_84	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	129	0	0	0
SC-T1-9_contig.fa_viral_86	2	4	14	9	5	7	41	63	33	18	23	12	4	4	1	29	2	21	33	85	125	29	8	11
SC-T1-9_contig.fa_viral_87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	10	76	0	0	0
SC-T1-9_contig.fa_viral_88	24	27	37	17	6	34	58	59	24	16	9	24	1	3	2	11	16	3	149	151	138	29	43	27
SC-T1-9_contig.fa_viral_89	1	6	16	3	1	14	4	2	1	4	4	0	19	16	3	3	3	3	120	1348	110	4	6	2
SC-T1-9_contig.fa_viral_90	47	47	65	41	7	35	70	61	42	25	8	16	3	0	0	18	32	10	178	213	153	30	83	34
SC-T1-9_contig.fa_viral_91	0	3	0	1	0	1	10	9	4	0	1	1	0	0	0	0	0	0	1	102	216	3	8	0
SC-T1-9_contig.fa_viral_92	0	3	2	2	0	2	3	7	3	0	2	0	0	1	0	0	0	0	2	38	106	2	2	1
SC-T1-9_contig.fa_viral_93	1	0	1	3	0	0	3	3	3	2	1	2	0	0	0	3	0	1	11	27	103	0	3	2
SC-T1-9_contig.fa_viral_94	0	0	0	1	0	2	5	6	9	3	5	1	0	0	0	22	0	5	3	135	230	9	5	2
SC-T1-9_contig.fa_viral_95	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	40	93	0	0	0
SC-T1-9_contig.fa_viral_96	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	6	23	95	2	2	0
SC-T1-9_contig.fa_viral_97	49	58	67	42	10	58	105	131	36	13	13	13	6	3	0	9	22	21	133	163	206	43	82	54
SC-T1-9_contig.fa_viral_98	0	1	0	0	0	3	6	8	6	1	0	0	0	0	0	1	0	0	0	106	170	7	5	0
SC-T1-9_contig.fa_viral_99	6	26	23	9	1	17	44	96	2	0	0	2	0	0	0	0	0	0	37	148	125	12	12	10
SC-T1-9_contig.fa_viral_100	6	25	45	4	2	15	96	185	7	0	1	0	1	0	0	1	3	2	124	221	153	25	25	17
SC-T1-9_contig.fa_viral_101	57	226	179	93	76	169	50	125	2	0	0	1	54	30	8	1	0	0	51	101	90	68	192	109
SC-T1-9_contig.fa_viral_102	4	5	1	3	6	8	39	45	27	4	10	7	0	0	0	18	1	5	3	333	517	53	37	14
SC-T1-9_contig.fa_viral_103	0	0	2	0	0	0	0	0	1	0	1	1	0	1	0	0	1	2	3	59	159	1	1	2
SC-T1-9_contig.fa_viral_104	2	1	0	4	2	2	41	27	6	11	12	14	1	0	0	40	0	8	99	102	105	10	18	4
SC-T1-9_contig.fa_viral_105	0	1	1	1	0	0	10	1	2	1	0	11	0	1	1	17	1	2	5	50	76	1	0	0
SC-T1-9_contig.fa_viral_107	2	0	0	5	0	0	1	6	14	14	14	28	0	0	0	138	3	19	5	64	143	5	0	1
SC-T1-9_contig.fa_viral_108	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	9	0	1	5	71	92	0	0	0
SC-T1-9_contig.fa_viral_109	1	3	2	0	1	0	5	2	6	3	3	0	0	0	0	0	0	0	8	48	95	0	2	0
SC-T1-9_contig.fa_viral_110	0	2	0	0	0	0	0	0	1	0	3	0	0	0	0	2	0	0	2	77	152	0	0	0
SC-T1-9_contig.fa_viral_111	0	1	1	0	0	0	2	25	11	1	1	1	0	0	0	8	1	4	5	30	83	3	1	2
SC-T1-9_contig.fa_viral_112	0	3	1	6	2	12	15	26	43	6	24	17	0	0	0	30	1	7	1	211	371	19	17	0
SC-T1-9_contig.fa_viral_113	0	0	0	0	0	0	1	2	1	0	0	1	0	0	0	1	0	1	0	61	62	0	0	0
SC-T1-9_contig.fa_viral_114	39	78	32	77	20	84	113	131	148	143	68	92	5	11	9	298	40	71	110	233	357	118	118	62
SC-T1-9_contig.fa_viral_115	0	1	0	0	6	4	21	20	10	0	4	3	0	0	0	0	0	0	1	161	198	9	7	9
SC-T1-9_contig.fa_viral_116	13	14	4	46	9	33	132	101	59	12	4	7	0	0	0	21	1	7	48	82	158	115	86	22
SC-T1-9_contig.fa_viral_117	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	70	0	2	0
SC-T1-9_contig.fa_viral_118	3	12	3	11	1	11	33	27	25	29	15	20	0	0	0	83	14	19	12	69	172	21	21	8
RC-T1-9_contig.fa_viral_60	7	1	0	3	4	3	1	1	5	1	0	2	0	9	104	1	1	1	1	3	1	0	1	1
RC-T1-9_contig.fa_viral_61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	116	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_62	0	0	0	0	0	0	0	0	0	0	0	0	0	0	424	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_63	0	0	0	0	0	0	0	0	0	0	0	0	0	0	139	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	79	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_65	0	0	0	0	0	0	0	0	0	0	0	1	0	1	638	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_66	0	0	0	0	11	3	0	0	0	0	0	0	0	8	76	0	0	0	0	0	0	0	1	0
RC-T1-9_contig.fa_viral_67	57	44	35	38	43	41	42	24	34	30	46	74	167	97	86	53	107	64	62	35	29	27	115	47
RC-T1-9_contig.fa_viral_68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	529	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_69	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_70	0	1	0	0	0	0	0	0	0	0	0	0	0	0	191	0	0	0	0	0	0	0	1	1
RC-T1-9_contig.fa_viral_71	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	0	0	0	0	0	0	0	0	1
RC-T1-9_contig.fa_viral_72	1	0	0	0	0	2	1	0	3	2	2	0	5	15	64	0	0	0	1	0	0	0	0	2
RC-T1-9_contig.fa_viral_73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	102	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_74	0	2	3	1	4	2	1	2	5	4	0	0	19	9	593	0	0	0	0	2	0	1	1	6
RC-T1-9_contig.fa_viral_75	0	0	0	0	0	0	0	0	0	0	0	0	4	10	147	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_76	0	2	1	0	0	0	0	1	2	0	0	0	0	0	96	0	0	0	0	0	0	1	1	0
RC-T1-9_contig.fa_viral_77	0	0	0	0	0	0	0	0	0	0	0	0	36	53	86	0	0	0	0	0	0	1	0	0
RC-T1-9_contig.fa_viral_78	0	0	0	0	0	0	0	0	0	0	0	0	0	0	159	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	197	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_80	0	0	0	0	0	0	0	0	0	0	0	0	0	0	100	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_81	58	124	111	85	82	173	71	107	114	50	61	51	137	84	527	111	26	41	133	122	123	87	137	104
RC-T1-9_contig.fa_viral_82	0	0	0	0	3	0	0	0	0	0	0	0	0	0	98	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_84	2	9	2	3	3	10	5	3	10	4	3	1	0	11	1277	4	6	7	6	5	1	4	7	8
RC-T1-9_contig.fa_viral_85	0	0	0	0	0	1	0	0	0	0	0	0	3	4	262	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_86	0	0	0	0	0	0	0	0	0	0	0	0	0	0	356	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_88	1	3	0	3	1	2	1	0	0	0	0	0	1	0	111	0	0	0	0	2	0	0	0	1
RC-T1-9_contig.fa_viral_89	0	0	0	0	0	0	0	0	1	0	1	0	0	0	281	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_90	674	450	299	337	218	450	262	304	357	462	517	448	475	396	756	841	733	421	435	359	332	230	799	394
RC-T1-9_contig.fa_viral_91	1	12	34	16	11	32	1	2	0	0	0	1	64	21	78	2	0	0	2	1	1	3	10	22
RC-T1-9_contig.fa_viral_92	2	1	0	0	0	0	0	0	0	0	0	0	0	2	103	2	2	1	1	1	0	1	3	0
RC-T1-9_contig.fa_viral_93	0	4	1	1	9	5	1	0	3	3	0	0	10	8	73	2	2	0	0	1	1	0	6	0
RC-T1-9_contig.fa_viral_94	1	0	0	0	0	0	1	0	0	0	0	0	0	0	104	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_95	0	0	0	0	0	0	0	0	0	0	0	0	0	0	104	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_96	10	11	10	12	7	19	10	12	8	9	13	8	3	9	86	16	14	9	15	13	14	12	30	13
RC-T1-9_contig.fa_viral_97	0	0	0	0	0	0	0	0	0	0	0	0	0	0	105	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_98	0	0	0	1	1	0	1	0	0	0	0	0	20	211	110	0	1	0	1	0	0	1	1	1
RC-T1-9_contig.fa_viral_99	2	8	22	34	20	10	6	8	0	0	0	0	52	48	78	0	0	1	17	10	1	8	6	25
RC-T1-9_contig.fa_viral_100	0	0	0	0	0	0	0	0	0	0	0	0	0	0	107	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_101	0	4	4	1	4	3	0	0	2	1	0	0	1	3	68	5	1	0	0	1	0	1	3	3
UAB-T1-9_contig.fa_viral_64	0	0	0	3	4	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	71	105
UAB-T1-9_contig.fa_viral_65	22	117	97	29	15	56	69	74	7	1	0	3	2	0	1	4	2	2	47	43	33	49	116	89
UAB-T1-9_contig.fa_viral_66	126	32	7	32	16	35	30	15	9	13	8	16	2	2	7	9	30	12	19	4	8	23	120	63
UAB-T1-9_contig.fa_viral_67	49	136	251	91	34	110	125	174	11	7	17	12	4	3	1	18	14	6	83	101	38	92	193	203
UAB-T1-9_contig.fa_viral_68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	76	225
UAB-T1-9_contig.fa_viral_69	21	36	8	13	2	11	13	8	3	1	2	3	8	0	4	2	1	1	6	2	2	14	144	117
UAB-T1-9_contig.fa_viral_70	3	4	1	6	1	6	9	5	0	1	0	0	1	1	0	0	0	0	1	2	1	1	78	56
UAB-T1-9_contig.fa_viral_71	38	47	42	38	9	80	89	54	23	4	2	4	4	1	1	13	19	21	90	95	60	38	93	90
UAB-T1-9_contig.fa_viral_72	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	324
UAB-T1-9_contig.fa_viral_73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	120
UAB-T1-9_contig.fa_viral_74	5	42	8	22	20	105	17	37	34	13	9	1	1	1	0	1	0	1	25	50	35	27	64	57
UAB-T1-9_contig.fa_viral_75	3	5	1	9	3	18	4	3	3	0	0	0	5	18	1	0	0	0	0	0	1	9	10	584
UAB-T1-9_contig.fa_viral_76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	94
UAB-T1-9_contig.fa_viral_77	65	16	7	34	11	31	11	17	11	14	25	5	2	3	1	2	2	2	23	15	10	16	51	48
UAB-T1-9_contig.fa_viral_79	1	0	3	0	1	3	4	3	3	0	0	0	2	1	3	1	0	0	5	14	4	0	26	91
UAB-T1-9_contig.fa_viral_80	39	67	77	42	4	20	37	67	4	7	7	14	2	5	8	10	29	11	49	74	19	69	117	116
UAB-T1-9_contig.fa_viral_81	31	183	265	88	33	91	154	188	0	0	0	0	0	0	0	0	0	0	81	122	18	93	219	218
UAB-T1-9_contig.fa_viral_82	98	36	12	56	12	57	45	30	24	37	36	17	4	1	0	23	9	7	49	23	34	16	96	85
UAB-T1-9_contig.fa_viral_83	8	23	2	10	0	0	22	16	0	0	0	0	0	0	0	0	0	0	2	1	0	10	31	45
UAB-T1-9_contig.fa_viral_84	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	1	209
UAB-T1-9_contig.fa_viral_85	24	24	5	9	7	21	23	9	8	9	18	8	6	6	0	7	23	9	20	7	19	13	611	344
UAB-T1-9_contig.fa_viral_87	0	0	0	1	1	0	0	0	1	0	4	2	1	1	1	3	0	1	0	1	1	8	181	281
UAB-T1-9_contig.fa_viral_88	64	256	455	97	42	96	199	244	22	6	1	3	10	2	3	6	4	5	125	153	72	122	266	224
UAB-T1-9_contig.fa_viral_89	12	15	1	10	0	4	27	16	0	0	3	0	0	0	0	2	3	0	1	1	1	11	51	112
UAB-T1-9_contig.fa_viral_90	35	54	34	59	10	46	27	27	15	18	26	33	28	32	14	43	118	61	39	23	16	19	341	199
UAB-T1-9_contig.fa_viral_91	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	85
UAB-T1-9_contig.fa_viral_92	11	8	14	18	7	9	11	2	3	5	4	7	4	2	4	19	9	5	5	4	7	5	78	54
UAB-T1-9_contig.fa_viral_93	9	51	95	19	16	40	59	49	1	0	0	0	0	0	0	0	0	0	28	25	9	31	78	81
UAB-T1-9_contig.fa_viral_94	48	68	8	43	11	13	9	20	2	2	4	2	0	0	0	3	9	3	7	1	3	28	258	203
UAB-T1-9_contig.fa_viral_95	12	6	0	10	0	6	5	3	0	0	0	2	0	0	0	0	0	0	1	0	0	4	243	101
UAB-T1-9_contig.fa_viral_96	30	70	116	38	16	46	49	62	4	1	0	1	10	6	6	0	0	0	10	22	5	25	86	60
UAB-T1-9_contig.fa_viral_97	43	171	238	89	34	101	169	173	9	3	10	2	6	3	2	12	15	11	151	161	62	119	262	182
UAB-T1-9_contig.fa_viral_98	47	55	30	39	15	54	41	41	18	13	29	24	12	25	7	10	31	20	28	27	17	46	126	108
UAB-T1-9_contig.fa_viral_99	89	171	66	48	14	18	32	36	5	6	6	8	8	14	7	3	30	22	19	10	8	121	154	176
UAB-T1-9_contig.fa_viral_100	0	6	9	8	2	6	0	0	0	0	0	0	1	46	0	0	0	0	0	0	0	1	10	137
UAB-T1-9_contig.fa_viral_101	2	30	181	93	5	9	1	12	1	0	0	0	5	0	0	0	0	0	11	5	1	59	58	161
UAB-T1-9_contig.fa_viral_102	126	123	59	96	29	72	86	57	55	62	86	169	41	19	14	122	364	188	102	60	43	60	477	223
UAB-T1-9_contig.fa_viral_104	32	30	6	34	0	9	17	26	0	1	0	0	1	0	0	0	0	0	4	2	1	22	110	124
UAB-T1-9_contig.fa_viral_105	19	17	7	22	15	38	4	11	3	2	2	4	15	9	6	14	2	0	9	4	2	1	98	93
UAB-T1-9_contig.fa_viral_106	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	327
UAB-T1-9_contig.fa_viral_107	228	52	7	98	7	66	58	25	20	8	11	7	12	4	14	8	9	6	38	11	20	35	170	94
UAB-T1-9_contig.fa_viral_108	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	76
UAB-T1-9_contig.fa_viral_109	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	96
RP-T1-6_contig.fa_viral_58	391	356	128	222	100	164	140	120	74	216	266	380	108	125	94	394	805	482	193	93	73	142	538	401
RP-T1-6_contig.fa_viral_59	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	89	9	2	0	0	0	0	0
RP-T1-6_contig.fa_viral_60	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	61	140	64	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_61	3	3	2	5	0	6	4	3	4	3	2	3	1	2	2	38	80	22	4	2	0	6	7	4
RP-T1-6_contig.fa_viral_62	24	5	16	21	4	18	15	8	12	27	87	119	5	6	2	58	149	43	41	9	11	6	50	36
RP-T1-6_contig.fa_viral_64	62	7	3	10	2	12	21	6	21	90	30	58	0	1	0	117	254	156	42	7	3	4	34	12
RP-T1-6_contig.fa_viral_65	1	1	0	1	1	1	0	0	0	1	3	0	1	0	0	3	151	36	3	3	0	1	6	2
RP-T1-6_contig.fa_viral_66	4	1	0	0	0	0	0	0	0	7	12	12	0	0	0	1284	481	209	0	0	1	0	1	0
RP-T1-6_contig.fa_viral_67	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	79	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_69	2	0	0	0	0	0	1	0	0	0	0	2	0	0	0	9	1340	420	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_70	0	0	0	0	0	0	0	0	0	5	1	9	0	0	0	429	165	42	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_71	36	34	32	21	5	31	37	37	40	7	35	11	3	2	0	72	73	44	26	30	25	12	47	18
RP-T1-6_contig.fa_viral_72	158	168	95	131	100	133	108	98	75	143	152	177	115	92	103	332	357	188	149	122	116	106	247	184
RP-T1-6_contig.fa_viral_73	27	8	2	10	4	15	2	4	2	24	27	43	1	5	3	81	199	71	13	3	2	11	13	8
RP-T1-6_contig.fa_viral_74	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	98	0	0	0	0	0	0	0
UAB-T1-9_contig.fa_viral_43	3	18	5	8	5	7	3	5	4	7	3	3	7	56	3	4	2	2	5	5	2	6	27	648
UAB-T1-9_contig.fa_viral_44	11	86	316	185	141	267	16	58	0	0	1	0	62	32	30	0	1	1	28	42	11	86	76	194
UAB-T1-9_contig.fa_viral_45	43	102	122	39	7	30	72	140	0	0	0	0	13	2	0	0	0	0	107	86	18	105	147	166
UAB-T1-9_contig.fa_viral_46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	24	71
UAB-T1-9_contig.fa_viral_47	13	11	1	28	1	0	1	3	0	1	2	3	0	3	0	5	8	10	3	1	0	11	233	137
UAB-T1-9_contig.fa_viral_48	1	16	17	12	0	1	19	53	1	1	1	1	0	0	0	5	1	2	73	51	41	8	7	56
UAB-T1-9_contig.fa_viral_50	8	17	270	43	152	327	60	250	4	5	2	3	8	8	8	11	4	9	2299	133	39	154	114	88
UAB-T1-9_contig.fa_viral_51	244	296	220	214	183	305	175	194	176	227	278	202	149	107	116	347	184	173	270	182	128	238	393	240
UAB-T1-9_contig.fa_viral_52	2	14	0	11	0	1	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	19	77	78
UAB-T1-9_contig.fa_viral_53	185	68	15	75	17	47	60	27	35	44	33	72	13	5	6	58	118	54	50	24	34	26	203	110
UAB-T1-9_contig.fa_viral_54	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	1	0	0	1	0	35	83
UAB-T1-9_contig.fa_viral_55	0	7	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	15	138
UAB-T1-9_contig.fa_viral_56	2	12	1	30	4	11	19	20	2	0	0	1	0	0	0	0	3	0	5	1	0	3	183	96
UAB-T1-9_contig.fa_viral_57	60	122	42	27	3	4	30	13	0	0	0	0	0	0	0	0	0	0	10	1	0	152	133	180
UAB-T1-9_contig.fa_viral_58	0	0	0	1	0	2	1	1	2	8	0	0	0	0	0	0	0	0	0	3	1	2	3	62
UAB-T1-9_contig.fa_viral_59	12	66	58	24	13	45	32	68	2	1	0	0	1	0	0	0	0	0	28	30	9	45	165	109
UAB-T1-9_contig.fa_viral_60	35	64	15	19	12	8	9	8	0	0	1	2	0	0	0	0	3	0	2	3	0	44	52	159
UAB-T1-9_contig.fa_viral_61	34	85	104	61	19	89	119	109	6	1	3	0	21	15	15	2	0	0	52	57	20	67	127	99
UAB-T1-9_contig.fa_viral_62	51	100	152	77	28	186	123	208	67	17	18	26	11	5	5	26	4	16	108	122	67	68	124	107
UAB-T1-9_contig.fa_viral_63	62	69	23	100	15	34	56	25	11	13	14	39	11	14	4	39	49	43	26	18	14	33	331	178
RP-T1-3_contig.fa_viral_261	2	1	2	7	1	7	4	1	41	110	18	10	0	0	0	259	20	220	0	1	1	5	5	0
RP-T1-3_contig.fa_viral_262	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	89	50	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_263	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	97	22	26	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_264	0	0	0	2	0	0	0	0	1	21	10	2	0	0	0	84	0	12	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_265	0	6	3	3	0	11	1	0	4	1	2	0	1	2	1	102	2	3	2	3	0	0	4	1
RP-T1-3_contig.fa_viral_266	11	22	8	26	4	25	75	51	70	88	39	30	3	0	2	292	9	92	40	73	115	56	52	28
RP-T1-3_contig.fa_viral_267	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_268	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4549	18	51	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_269	4	13	9	26	2	15	108	62	69	60	8	13	0	0	0	304	3	104	33	64	110	85	82	35
RP-T1-3_contig.fa_viral_270	0	0	1	0	0	0	0	0	0	0	0	4	0	0	0	7367	2	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_271	2	4	4	1	0	0	1	3	0	2	4	1	0	1	0	297	7	4	3	7	4	4	2	1
RP-T1-3_contig.fa_viral_272	0	1	0	0	0	1	0	0	0	0	0	4	3	0	0	173	117	59	1	2	1	1	1	0
RP-T1-3_contig.fa_viral_273	7	12	8	3	3	0	2	7	0	21	5	21	3	11	1	222	76	34	0	6	7	5	9	11
RP-T1-3_contig.fa_viral_274	0	0	1	1	0	2	0	3	1	0	0	0	0	0	0	154	6	9	0	0	0	1	0	1
RP-T1-3_contig.fa_viral_275	0	1	8	1	0	5	3	2	4	28	13	22	0	0	0	202	20	24	0	1	4	3	2	0
RP-T1-3_contig.fa_viral_276	13	17	7	7	6	16	11	13	9	26	21	18	7	6	6	104	27	41	14	16	8	10	21	10
RP-T1-3_contig.fa_viral_277	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	11	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_278	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	99	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_279	5	15	4	5	2	6	2	9	6	8	4	8	3	0	0	271	22	58	11	7	4	3	12	5
RP-T1-3_contig.fa_viral_280	0	2	0	2	0	3	2	6	0	16	30	19	0	0	0	151	8	6	16	8	16	4	16	5
RP-T1-3_contig.fa_viral_281	0	5	1	2	0	5	4	1	8	33	8	0	0	0	0	85	6	51	0	0	0	3	4	1
RP-T1-3_contig.fa_viral_282	0	1	0	0	0	0	1	2	3	1	0	1	0	0	0	363	1	4	0	8	5	0	0	0
RP-T1-3_contig.fa_viral_283	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	607	333	53	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_284	20	12	5	8	2	7	28	10	8	22	13	50	2	3	0	292	587	251	36	13	13	6	42	14
RP-T1-3_contig.fa_viral_285	2820	2038	1357	1465	794	1575	1278	1238	1244	1704	1881	1726	1661	980	1330	3006	3046	1764	1784	1453	1063	974	3818	1830
RP-T1-3_contig.fa_viral_286	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	148	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_287	0	0	0	0	0	0	0	0	1	37	15	23	0	0	0	169	2	20	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_288	3	16	27	14	4	7	13	11	8	11	7	9	8	4	3	230	9	37	18	15	5	6	23	9
RP-T1-3_contig.fa_viral_289	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	117	38	12	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_290	31	44	55	54	34	61	45	47	43	62	20	22	16	16	26	376	59	53	47	73	70	49	50	22
RP-T1-3_contig.fa_viral_291	0	0	0	0	0	0	0	0	0	0	3	8	0	0	0	173	222	76	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_292	0	0	0	0	0	0	0	0	0	4	3	1	0	0	0	95	5	17	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_293	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	167	52	20	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_294	3	0	1	0	0	1	2	1	1	3	3	7	0	0	0	159	0	8	5	2	2	0	1	1
RP-T1-3_contig.fa_viral_295	3	3	4	4	3	7	5	4	16	97	34	44	3	1	6	302	16	31	5	11	18	10	10	3
RP-T1-3_contig.fa_viral_296	0	0	0	0	0	0	1	1	1	20	6	4	0	0	0	231	6	8	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_297	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	19	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_298	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	121	29	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_299	0	2	0	2	1	0	3	1	9	59	28	45	0	2	0	267	19	21	2	0	2	3	2	1
RP-T1-3_contig.fa_viral_300	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	121	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_301	2	22	48	14	2	22	30	52	30	9	11	8	6	7	1	83	7	23	33	46	27	14	21	6
RP-T1-3_contig.fa_viral_302	0	0	0	3	0	0	1	1	118	199	30	3	0	0	0	689	2	160	2	0	5	1	0	0
RP-T1-3_contig.fa_viral_303	0	1	0	0	0	2	0	2	1	61	114	84	0	0	0	256	4	14	0	4	3	1	1	0
RP-T1-3_contig.fa_viral_304	0	3	0	0	0	2	0	3	2	119	124	94	0	0	0	550	10	15	1	2	0	1	0	1
RP-T1-3_contig.fa_viral_305	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	181	62	24	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_306	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	69	5	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_307	1	0	0	1	0	2	0	1	0	2	34	7	0	0	0	231	59	8	0	0	0	0	2	0
RP-T1-3_contig.fa_viral_308	0	5	1	1	1	5	7	13	28	96	159	18	0	0	0	168	0	20	1	10	16	2	2	0
RP-T1-3_contig.fa_viral_309	0	0	0	0	0	0	0	0	3	36	8	9	0	0	0	168	9	63	1	1	1	0	0	0
RP-T1-3_contig.fa_viral_310	0	0	0	0	0	0	0	0	3	21	2	7	0	0	0	76	2	40	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_311	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	242	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_312	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	0	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_313	3	3	2	2	3	2	3	0	3	6	11	6	4	3	0	113	44	23	3	4	3	3	1	2
RP-T1-3_contig.fa_viral_314	0	0	0	0	0	0	0	0	0	9	2	19	0	0	0	107	35	14	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_315	5	5	2	4	0	1	0	1	6	4	8	16	0	0	4	1648	11	6	12	3	3	6	4	4
RP-T1-3_contig.fa_viral_316	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	149	0	0	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_317	0	0	0	0	0	0	0	0	11	8	7	1	0	0	0	64	77	35	1	0	0	0	0	0
RP-T1-3_contig.fa_viral_318	1	2	2	0	5	4	3	6	7	0	0	0	0	0	0	269	3	41	1	3	0	1	1	2
RP-T1-3_contig.fa_viral_319	0	0	0	0	0	0	0	0	0	0	1	12	0	0	0	80	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_320	0	1	0	0	0	0	1	1	48	174	33	6	0	0	0	724	0	153	0	7	7	0	0	0
RP-T1-3_contig.fa_viral_321	0	0	0	1	0	0	0	0	2	3	3	14	0	0	0	118	8	46	0	0	1	0	0	0
RP-T1-3_contig.fa_viral_322	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	122	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_323	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	150	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_324	1	0	4	1	0	1	1	0	3	3	5	2	3	0	1	177	0	0	4	1	0	0	5	4
RP-T1-3_contig.fa_viral_325	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	106	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_326	0	0	0	3	0	1	1	2	3	13	16	16	0	0	0	169	73	20	2	1	2	0	5	0
RP-T1-3_contig.fa_viral_327	13	15	21	11	15	10	10	11	8	13	8	4	8	5	6	263	24	32	16	16	15	3	21	19
RP-T1-3_contig.fa_viral_328	1	0	0	5	0	1	5	12	12	28	14	27	0	0	0	132	7	69	5	11	23	3	4	3
RP-T1-3_contig.fa_viral_329	7	5	4	6	3	4	4	3	18	9	3	0	1	0	4	179	0	12	2	2	2	1	1	3
RP-T1-3_contig.fa_viral_330	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	213	2	32	0	0	3	0	2	0
RP-T1-3_contig.fa_viral_331	0	2	0	3	2	5	1	8	102	168	31	11	0	0	0	726	0	121	2	6	11	7	2	2
RP-T1-3_contig.fa_viral_332	0	5	5	7	1	8	11	3	21	84	20	54	0	0	0	226	38	18	9	14	18	10	7	2
RP-T1-3_contig.fa_viral_333	11	13	7	8	7	10	3	1	2	3	4	6	0	0	0	67	99	6	1	2	0	3	25	6
RP-T1-3_contig.fa_viral_334	1	3	0	1	0	1	7	2	1	5	0	1	1	0	0	98	30	14	0	4	0	3	1	2
RP-T1-3_contig.fa_viral_335	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	162	77	12	0	0	0	0	1	0
RP-T1-3_contig.fa_viral_336	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	74	9	1	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_337	0	0	0	1	0	0	0	1	2	3	1	5	0	0	0	622	4	2	0	4	9	0	0	1
RP-T1-3_contig.fa_viral_338	23	32	23	42	20	40	61	64	96	124	64	78	13	14	6	478	52	74	72	86	157	67	64	28
RP-T1-3_contig.fa_viral_339	0	0	0	0	0	0	0	0	0	8	5	8	0	0	0	285	41	60	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_340	33	21	10	18	8	25	13	10	10	165	70	36	8	11	7	171	43	48	11	13	8	9	38	11
HP-T1-9_contig.fa_viral_274	0	0	0	0	0	0	0	0	0	8	24	124	0	0	0	27	57	10	1	0	1	2	0	0
HP-T1-9_contig.fa_viral_275	0	0	0	0	0	0	0	0	0	6	0	1926	0	0	0	0	2	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_277	8	6	0	3	2	2	2	5	4	5	380	358	4	1	2	5	7	7	4	3	1	2	6	5
HP-T1-9_contig.fa_viral_278	0	0	0	0	0	0	0	0	0	0	23	125	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_279	0	0	0	0	0	0	0	0	0	7	0	174	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_280	0	0	0	2	0	0	0	1	0	3	46	159	0	0	0	1	0	0	1	0	1	1	0	0
HP-T1-9_contig.fa_viral_281	0	3	1	6	1	6	3	1	2	11	156	152	3	3	0	3	4	1	6	3	3	3	2	3
HP-T1-9_contig.fa_viral_282	2	0	0	1	0	0	0	1	5	12	44	171	0	0	0	22	38	37	2	2	2	2	2	0
HP-T1-9_contig.fa_viral_283	0	0	0	0	0	0	0	0	0	6	76	133	0	0	0	0	2	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_284	0	0	0	0	0	0	0	0	0	0	22	149	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_285	0	0	0	0	0	0	0	0	0	0	0	1261	0	0	0	0	0	1	0	0	0	0	0	1
HP-T1-9_contig.fa_viral_286	0	0	0	0	0	0	0	0	0	0	0	93	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_287	0	0	0	1	0	2	0	2	0	19	45	160	0	0	0	8	0	3	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_288	0	0	0	1	0	0	0	0	0	10	0	149	0	0	0	0	0	0	0	0	0	0	1	0
HP-T1-9_contig.fa_viral_289	0	0	0	0	0	0	0	0	0	83	78	472	1	0	1	298	1	2	0	0	1	0	0	0
HP-T1-9_contig.fa_viral_290	7	3	0	0	0	1	2	0	3	8	25	152	0	0	0	119	4	1	0	0	1	0	1	2
HP-T1-9_contig.fa_viral_291	0	0	0	0	0	0	0	0	0	0	146	119	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_292	0	0	0	0	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_294	0	0	0	0	0	0	0	0	0	0	0	211	0	0	0	0	2	0	0	0	1	0	0	0
HP-T1-9_contig.fa_viral_296	3	1	4	4	3	11	1	2	1	24	7	71	0	1	0	3	2	0	7	3	11	0	6	2
HP-T1-9_contig.fa_viral_297	0	0	0	0	0	0	0	0	0	14	26	75	0	0	0	23	17	9	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_298	0	0	0	0	0	0	0	0	0	0	4	80	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_299	0	0	0	0	0	0	1	0	0	0	0	2871	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_300	0	4	2	0	0	0	1	0	0	2	0	414	0	1	1	2	13	5	2	0	0	0	0	0
HP-T1-9_contig.fa_viral_301	0	0	0	0	0	0	0	0	0	0	130	120	0	0	1	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_302	0	0	0	0	0	0	0	0	0	2	0	76	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_303	5	5	1	2	0	1	4	3	6	5	11	187	0	1	0	44	2	5	9	9	6	6	4	4
HP-T1-9_contig.fa_viral_304	0	0	0	0	0	0	0	0	0	0	0	68	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_305	0	0	0	0	0	0	0	0	0	0	6	93	0	1	0	1	0	0	0	0	0	0	0	1
HP-T1-9_contig.fa_viral_306	0	0	0	0	0	0	1	0	0	13	0	106	0	0	0	1	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_307	18	4	3	6	6	10	2	1	3	32	21	84	4	2	5	18	26	26	1	8	0	1	4	3
HP-T1-9_contig.fa_viral_308	7	6	6	7	8	13	3	6	4	9	10	702	5	6	4	6	16	5	5	2	0	4	20	9
HP-T1-9_contig.fa_viral_310	0	1	0	1	0	1	1	0	0	168	159	254	0	0	0	658	80	41	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_311	0	1	0	0	0	0	0	0	1	1	5	89	0	0	0	3	1	2	0	0	2	2	5	0
HP-T1-9_contig.fa_viral_312	0	0	0	0	0	0	0	0	1	42	77	325	0	0	0	0	0	2	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_313	7	3	5	5	2	6	2	0	2	4	13	100	3	2	3	26	24	10	1	2	1	2	7	6
HP-T1-9_contig.fa_viral_314	0	0	0	0	0	0	0	0	0	0	0	93	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_315	0	0	0	0	0	0	0	0	0	0	0	56	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_316	7	5	1	4	2	7	0	0	1	13	11	160	1	3	3	2	5	3	2	0	0	2	8	2
HP-T1-9_contig.fa_viral_317	0	0	0	0	0	0	2	0	0	16	4	114	0	0	0	3	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_318	636	692	445	602	338	610	355	413	354	531	9233	27097	379	285	276	932	1065	694	609	452	425	408	1066	631
HP-T1-9_contig.fa_viral_319	1	2	0	3	0	0	0	0	0	38	52	236	0	0	0	33	44	50	2	0	0	0	8	3
HP-T1-9_contig.fa_viral_320	0	1	0	0	0	3	0	1	3	11	34	113	0	1	0	8	0	0	5	1	6	7	2	1
HP-T1-9_contig.fa_viral_321	0	0	0	0	0	0	0	0	0	2	11	129	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_322	0	0	0	0	0	0	0	0	0	0	0	100	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_323	3	0	0	0	0	0	0	0	0	20	30	97	0	0	0	39	35	26	2	0	4	0	0	1
HP-T1-9_contig.fa_viral_324	0	0	0	0	0	0	0	0	0	3	0	295	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_325	7	5	0	6	1	1	2	1	2	37	22	121	2	1	0	53	10	10	1	2	0	5	6	6
HP-T1-9_contig.fa_viral_327	0	0	0	0	0	0	0	0	0	6	45	124	0	0	0	0	0	0	1	2	2	2	0	0
HP-T1-9_contig.fa_viral_328	0	0	0	0	0	0	0	0	0	20	0	388	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_329	0	0	0	0	0	0	0	0	0	0	1	299	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_330	0	0	0	0	0	0	0	0	0	0	25	102	0	0	0	31	3	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_331	37	42	40	53	39	77	20	47	59	92	112	184	19	17	21	118	25	36	45	50	58	34	62	36
HP-T1-9_contig.fa_viral_332	7	7	3	3	4	10	0	7	3	7	53	83	12	5	8	10	3	2	16	3	5	3	6	2
HP-T1-9_contig.fa_viral_333	0	0	0	0	0	0	0	0	0	4	5	112	0	0	0	4	12	6	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_334	0	0	0	0	0	0	0	0	0	0	0	347	0	0	0	0	2	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_335	0	0	0	0	0	0	0	0	0	16	0	311	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_336	8	3	2	1	1	2	1	0	6	7	24	158	0	0	0	150	6	4	4	1	0	1	2	3
HP-T1-9_contig.fa_viral_337	0	0	0	0	0	0	0	0	0	0	295	924	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_338	2	7	8	5	2	7	1	4	7	16	494	1186	2	2	2	9	5	2	7	12	2	5	9	5
HP-T1-9_contig.fa_viral_339	0	0	0	0	0	0	0	0	0	35	117	129	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_340	0	0	0	0	0	0	0	0	0	0	0	70	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_341	1	0	0	0	0	0	0	0	0	0	58	167	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_342	0	0	0	0	0	0	0	0	0	0	0	109	0	0	0	0	0	1	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_343	11	7	12	16	13	18	12	21	28	61	139	378	8	6	14	87	24	42	14	35	36	20	18	14
HP-T1-9_contig.fa_viral_344	3	0	2	0	1	0	0	0	1	7	44	133	0	0	0	34	20	28	0	2	0	0	0	0
HP-T1-9_contig.fa_viral_345	0	0	0	0	0	0	0	0	0	1	0	119	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_346	47	77	58	58	36	69	49	46	49	68	118	187	15	14	4	107	62	52	79	45	38	62	90	62
HP-T1-9_contig.fa_viral_347	0	0	0	0	0	0	0	0	0	0	88	244	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_348	0	0	0	0	0	0	0	0	0	0	0	114	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_349	0	0	0	0	0	0	0	0	0	0	51	208	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_350	0	0	0	0	0	0	0	0	1	2	11	77	1	0	0	6	55	46	2	0	0	0	1	0
HP-T1-9_contig.fa_viral_351	2	5	2	9	1	7	2	14	5	1	10	85	0	1	1	60	8	7	12	8	23	4	5	6
HP-T1-9_contig.fa_viral_352	7	1	1	6	2	4	5	2	4	4	12	102	0	0	2	59	5	0	6	3	5	5	7	6
HP-T1-9_contig.fa_viral_353	1	0	2	1	0	1	0	2	0	1	2	200	2	0	2	2	3	4	2	0	0	1	0	0
HP-T1-9_contig.fa_viral_354	1	0	0	0	0	0	0	0	0	0	1	310	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_356	7	4	6	4	2	16	3	3	2	13	15	76	5	4	2	9	11	5	5	3	5	2	2	1
HP-T1-9_contig.fa_viral_357	0	0	0	0	1	0	0	0	0	108	52	196	0	0	0	467	34	24	0	1	2	0	0	0
HP-T1-9_contig.fa_viral_358	0	0	0	0	0	0	0	0	0	0	0	261	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_359	1	0	0	0	0	0	0	0	1	12	26	125	0	0	0	72	48	23	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_360	0	0	0	0	0	0	0	0	0	0	0	150	0	0	0	1	7	6	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_361	4	1	2	3	1	4	1	0	7	45	77	137	2	2	1	34	4	3	2	3	1	11	18	6
HP-T1-9_contig.fa_viral_362	0	0	0	0	0	0	0	0	0	0	0	493	0	0	0	3	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_363	2	1	0	0	0	0	1	0	1	1	27	120	0	1	2	17	3	1	0	2	2	0	2	0
HP-T1-9_contig.fa_viral_364	0	0	0	0	0	0	1	0	0	19	1	130	0	0	0	0	1	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_365	3	6	0	1	0	7	1	0	3	68	154	157	3	5	2	22	46	25	1	3	1	3	5	8
HP-T1-9_contig.fa_viral_366	0	0	0	0	0	0	0	0	0	3	0	111	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-9_contig.fa_viral_367	0	0	0	0	0	0	0	0	0	0	0	152	0	0	0	0	0	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_258	12	21	10	14	9	12	9	6	9	26	29	43	10	8	12	41	254	97	17	12	10	12	35	18
RP-T1-6_contig.fa_viral_259	2	0	0	0	4	0	3	0	2	9	1	3	0	0	0	45	169	3	2	0	0	0	1	2
RP-T1-6_contig.fa_viral_260	1	0	2	0	0	1	0	0	0	3	6	1	0	0	0	11	84	66	1	0	0	0	1	1
RP-T1-6_contig.fa_viral_261	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	121	53	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_262	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	130	10	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_263	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	65	14	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_264	0	0	0	0	0	0	0	0	0	2	1	17	0	0	0	12	69	12	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_265	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	184	3	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_266	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	90	4	0	0	0	0	0	1
RP-T1-6_contig.fa_viral_267	10	6	4	4	0	4	9	10	8	9	5	21	0	0	0	115	249	93	8	5	4	5	14	6
RP-T1-6_contig.fa_viral_268	3	1	0	0	0	0	3	1	0	3	3	21	0	2	0	50	226	55	8	1	1	1	4	0
RP-T1-6_contig.fa_viral_269	5	0	0	0	0	0	0	0	0	3	2	1	0	0	0	39	97	5	1	0	0	0	0	0
HP-T1-6_contig.fa_viral_270	0	0	0	0	0	0	0	0	0	1	144	60	0	0	0	1	0	0	0	1	2	0	0	0
HP-T1-6_contig.fa_viral_271	0	0	0	0	0	0	0	0	0	0	73	44	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_272	0	0	0	0	0	0	0	0	0	0	819	2	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_273	0	0	0	0	0	0	0	0	0	0	106	0	0	0	0	0	0	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_274	0	0	0	0	0	0	0	0	1	119	543	883	0	0	0	6	2	0	0	0	0	0	0	0
HP-T1-6_contig.fa_viral_275	0	0	0	0	0	0	0	0	0	0	214	1	0	0	0	0	0	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_458	216	197	118	203	57	127	134	88	70	143	137	209	56	46	16	283	576	301	167	91	63	130	458	263
RP-T1-6_contig.fa_viral_459	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	16	61	24	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_460	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	75	25	0	0	2	0	0	0
RP-T1-6_contig.fa_viral_461	51	65	42	43	30	72	44	51	53	66	120	156	35	36	41	229	124	58	64	42	51	40	102	57
RP-T1-6_contig.fa_viral_462	20	12	3	10	8	12	8	8	3	18	15	20	2	14	0	36	111	26	8	8	15	11	25	20
RP-T1-6_contig.fa_viral_463	3	2	1	4	3	7	1	1	5	4	1	2	0	2	0	30	76	50	1	0	0	1	6	1
RP-T1-6_contig.fa_viral_464	0	0	0	0	0	0	0	0	0	0	6	6	1	0	0	611	227	66	0	0	1	0	0	0
RP-T1-6_contig.fa_viral_465	0	0	0	0	0	0	0	0	0	1	2	10	0	0	0	127	202	72	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_466	34	13	5	21	6	12	12	5	10	18	18	22	0	5	1	29	64	27	12	6	10	7	56	34
RP-T1-6_contig.fa_viral_467	18	5	2	2	0	11	3	1	0	20	15	19	0	0	0	74	294	123	3	2	2	6	19	16
RP-T1-6_contig.fa_viral_468	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	243	4	0	1	0	0	0	0
RP-T1-6_contig.fa_viral_469	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	40	72	24	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_470	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	156	9	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_471	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	251	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_472	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	143	1	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_473	12	6	5	11	7	10	12	8	2	11	12	27	1	3	2	47	113	38	22	14	6	10	31	18
RP-T1-6_contig.fa_viral_474	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	93	218	85	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_475	36	27	10	28	7	13	15	10	15	34	28	67	1	5	5	53	177	135	23	11	7	14	61	43
RP-T1-6_contig.fa_viral_477	21	10	7	10	9	17	5	6	2	7	12	41	7	12	4	35	132	49	15	11	8	2	22	11
RP-T1-6_contig.fa_viral_478	28	33	19	37	11	36	21	19	21	35	96	257	10	6	9	97	164	89	42	36	40	25	49	30
RP-T1-6_contig.fa_viral_479	16	6	6	13	2	5	14	4	9	17	16	36	4	8	8	43	162	48	10	9	8	12	43	24
RP-T1-6_contig.fa_viral_480	0	0	0	0	1	1	0	0	0	4	3	10	0	0	0	11	63	12	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_481	1	1	2	4	0	3	1	2	0	0	2	1	0	0	0	23	91	0	1	5	3	3	2	1
RP-T1-6_contig.fa_viral_482	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	249	36	5	0	0	0	0	0
RP-T1-6_contig.fa_viral_483	6	3	1	5	0	3	9	7	6	5	3	7	0	0	0	111	217	93	21	11	1	1	21	12
RP-T1-6_contig.fa_viral_484	2	2	1	0	1	1	1	2	0	8	14	36	0	0	0	14	86	34	2	1	0	1	2	2
RP-T1-6_contig.fa_viral_485	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	169	3	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_486	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	55	18	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_487	0	0	1	0	0	0	0	0	0	1	2	6	3	0	0	2	452	15	0	0	0	0	1	0
RP-T1-6_contig.fa_viral_488	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	287	696	2	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_489	9	4	3	4	1	4	1	3	3	23	18	37	3	0	2	42	107	62	8	3	3	1	5	5
RP-T1-6_contig.fa_viral_490	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	51	106	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_491	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	79	31	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_493	3	0	0	0	3	0	0	0	0	10	4	5	1	0	0	25	126	56	2	0	0	0	4	0
RP-T1-6_contig.fa_viral_494	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	5	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_495	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	70	311	138	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_496	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	226	394	226	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_497	0	0	0	0	0	0	0	0	0	20	25	80	0	0	0	89	421	193	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_498	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	553	128	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_499	1	0	0	2	1	1	0	0	0	3	3	1	0	0	1	32	78	44	0	2	2	0	1	1
RP-T1-6_contig.fa_viral_500	26	8	6	13	1	12	19	13	8	17	17	40	16	5	0	105	260	119	29	22	14	9	37	16
RP-T1-6_contig.fa_viral_501	14	18	12	13	1	6	24	17	8	25	12	50	1	0	0	181	304	125	20	13	7	17	31	20
RP-T1-6_contig.fa_viral_502	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	138	43	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_503	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	116	28	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_504	20	5	13	15	9	12	20	13	7	22	41	115	9	4	5	109	166	56	20	16	11	7	60	31
RP-T1-6_contig.fa_viral_505	0	1	0	0	0	1	1	4	1	1	3	8	3	0	1	189	88	42	1	1	2	0	3	0
RP-T1-6_contig.fa_viral_506	10	1	0	0	0	1	0	0	0	1	4	2	0	0	0	51	64	17	1	0	0	0	2	0
RP-T1-6_contig.fa_viral_507	112	85	44	78	42	78	49	33	23	65	74	87	76	57	44	81	344	148	82	34	25	58	190	116
RP-T1-6_contig.fa_viral_509	6	0	0	1	0	0	0	1	1	15	2	1	0	0	0	121	291	5	5	0	0	0	3	0
RP-T1-6_contig.fa_viral_510	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	67	126	0	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_511	7	12	4	15	7	8	0	0	2	6	25	17	2	0	1	33	97	40	6	1	0	2	11	11
RP-T1-6_contig.fa_viral_512	7	6	9	6	15	4	13	7	5	8	10	21	3	12	3	14	156	34	15	14	4	13	23	11
RP-T1-6_contig.fa_viral_513	6	2	0	5	1	7	1	1	1	4	7	29	2	2	1	32	79	8	9	7	0	2	9	5
RP-T1-6_contig.fa_viral_514	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	154	117	0	0	0	0	0	0
RP-T1-6_contig.fa_viral_515	12	4	2	4	2	1	1	0	0	4	13	22	2	5	0	17	199	109	4	2	3	2	6	4
RP-T1-6_contig.fa_viral_517	2	7	2	4	0	1	8	3	3	4	7	36	2	1	0	15	111	49	2	3	0	8	10	2
RP-T1-6_contig.fa_viral_519	4	0	0	1	0	0	0	0	0	3	9	5	0	0	0	673	230	90	0	0	0	0	0	0
RP-T1-9_contig.fa_provirus_2	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	82	167	69	0	0	0	0	0	0
RP-T1-9_contig.fa_provirus_3	4	7	1	2	0	3	4	4	8	22	14	24	0	0	0	184	313	160	12	1	0	1	35	13
RP-T1-9_contig.fa_provirus_4	32	3	7	5	4	1	3	2	6	4	7	21	0	1	1	37	103	115	4	1	4	3	8	2
RP-T1-9_contig.fa_provirus_6	97	81	14	45	16	34	29	13	21	71	66	89	14	27	13	59	208	232	30	14	6	37	101	62
RP-T1-9_contig.fa_viral_1	8	11	0	9	0	1	3	4	0	10	17	40	0	0	0	73	290	128	0	3	0	6	17	17
RP-T1-9_contig.fa_viral_2	65	49	26	55	9	53	34	17	40	40	70	136	21	16	3	103	175	194	56	32	29	35	128	55
RP-T1-9_contig.fa_viral_3	87	24	15	52	7	58	24	32	52	37	22	19	0	0	0	39	135	100	50	19	21	21	99	47
RP-T1-9_contig.fa_viral_5	0	0	0	0	0	0	0	0	0	7	4	55	0	0	0	61	258	141	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_6	0	2	0	1	0	1	15	6	253	49	18	8	0	0	0	19	26	157	1	4	6	5	13	6
RP-T1-9_contig.fa_viral_7	9	1	1	0	0	0	2	0	2	3	6	6	0	2	0	9	13	116	29	1	0	1	1	1
RP-T1-9_contig.fa_viral_8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	541	127	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	85	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_11	0	0	0	0	0	0	0	0	19	42	1	9	0	0	0	77	40	135	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	93	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_13	7	5	3	7	3	5	3	6	3	13	6	18	3	3	2	45	185	76	3	4	2	3	39	14
RP-T1-9_contig.fa_viral_14	105	135	98	115	61	111	90	65	69	123	118	181	48	64	47	304	433	249	182	100	71	56	257	106
RP-T1-9_contig.fa_viral_15	20	22	40	19	3	23	35	70	27	16	20	14	1	1	1	144	124	120	46	44	21	23	43	21
RP-T1-9_contig.fa_viral_16	0	2	0	7	0	2	5	5	7	8	2	1	0	0	0	358	79	106	2	7	7	5	5	3
RP-T1-9_contig.fa_viral_17	12	43	21	89	17	110	59	68	159	93	26	34	0	0	0	380	58	146	52	60	104	72	47	24
RP-T1-9_contig.fa_viral_19	0	4	0	0	0	0	1	2	16	28	5	4	0	0	0	50	20	82	0	2	0	2	1	1
RP-T1-9_contig.fa_viral_20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	81	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_21	1	1	0	0	0	0	0	0	0	11	19	44	0	0	0	78	279	183	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_22	1	6	1	2	0	3	14	6	20	52	25	17	0	0	0	327	9	104	3	12	17	9	12	4
RP-T1-9_contig.fa_viral_23	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	464	181	65	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_24	0	3	0	0	0	0	9	2	9	58	8	8	0	0	0	202	3	68	0	4	10	8	5	5
RP-T1-9_contig.fa_viral_25	0	0	0	0	0	0	0	0	0	1	1	6	0	0	0	75	84	91	1	0	0	0	0	0
RP-T1-9_contig.fa_viral_26	1	4	0	8	3	14	5	4	44	85	4	3	0	0	0	155	24	128	0	1	1	4	3	2
RP-T1-9_contig.fa_viral_28	0	0	0	0	0	0	0	0	0	1	0	5	0	0	0	27	126	68	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_29	4	3	3	12	1	7	44	20	27	80	17	9	0	0	0	316	4	106	13	27	38	18	16	14
RP-T1-9_contig.fa_viral_30	4	2	1	1	5	0	0	0	1	5	11	5	0	0	0	29	17	216	4	5	3	4	9	5
RP-T1-9_contig.fa_viral_31	0	0	0	0	0	0	0	0	0	11	2	4	0	0	0	1108	100	198	0	0	0	0	0	0
RP-T1-9_contig.fa_viral_32	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	8	115	2	0	0	0	0	0
RP-T1-3_contig.fa_viral_661	17	4	1	7	1	5	10	1	16	49	20	85	0	2	0	189	392	195	13	4	10	1	9	8
RP-T1-3_contig.fa_viral_662	0	0	2	0	0	0	4	1	3	3	6	3	0	0	0	114	30	22	8	7	12	1	3	1
RP-T1-3_contig.fa_viral_663	1	6	4	3	2	5	3	7	8	36	16	8	5	2	9	171	15	50	5	14	10	7	9	8
RP-T1-3_contig.fa_viral_664	62	106	66	60	41	57	47	47	40	41	60	58	39	35	24	198	114	73	73	34	39	38	75	55
RP-T1-3_contig.fa_viral_665	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	261	85	22	0	0	0	0	0	0
UAB-T1-6_contig.fa_viral_208	1	1	0	1	0	1	2	0	0	1	1	2	0	0	0	3	1	0	1	0	0	0	57	6
UAB-T1-6_contig.fa_viral_209	35	42	2	29	12	33	11	5	10	15	23	19	5	2	2	6	17	7	6	9	3	10	225	136
UAB-T1-6_contig.fa_viral_210	64	18	43	31	10	27	16	15	2	6	40	30	4	6	11	23	84	32	21	5	9	8	135	58
UAB-T1-6_contig.fa_viral_212	16	72	52	38	8	45	14	36	16	0	0	1	14	11	11	1	1	0	13	35	6	15	96	67
UAB-T1-6_contig.fa_viral_213	15	9	0	6	7	11	13	5	9	19	17	47	18	11	2	40	36	10	22	0	11	3	90	30
UAB-T1-6_contig.fa_viral_214	0	0	0	3	0	0	1	1	5	0	3	0	0	0	0	0	0	0	36	10	20	0	150	1
UAB-T1-6_contig.fa_viral_215	1	18	3	2	0	0	13	4	0	1	0	0	23	11	5	0	0	0	1	2	4	2	92	3
UAB-T1-6_contig.fa_viral_216	0	0	0	0	0	1	1	0	1	2	1	2	0	1	0	0	2	3	2	2	5	3	89	45
UAB-T1-6_contig.fa_viral_217	28	2	2	3	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	70	22
UAB-T1-6_contig.fa_viral_218	31	22	26	31	7	20	30	19	25	31	27	63	7	4	3	56	136	73	27	11	12	28	221	42
UAB-T1-6_contig.fa_viral_219	13	100	170	46	8	42	46	131	22	11	8	6	15	7	3	25	1	15	164	241	91	47	77	55
UAB-T1-6_contig.fa_viral_220	0	6	1	2	0	0	1	4	0	0	0	0	1	0	0	0	2	0	0	0	0	1	112	6
UAB-T1-6_contig.fa_viral_221	0	0	0	1	0	3	3	1	5	0	0	0	0	0	0	6	12	6	1	0	0	5	222	29
UAB-T1-6_contig.fa_viral_222	4	1	0	36	0	0	20	10	0	0	0	0	0	0	0	0	0	0	25	5	11	11	182	64
UAB-T1-6_contig.fa_viral_223	209	331	98	99	21	24	93	82	13	35	41	48	19	34	14	34	93	39	67	21	15	346	398	284
UAB-T1-6_contig.fa_viral_224	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	72	0
UAB-T1-6_contig.fa_viral_225	9	4	1	27	5	22	3	3	0	0	1	0	0	0	0	1	0	0	3	5	2	2	135	78
UAB-T1-6_contig.fa_viral_226	0	1	0	1	0	1	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	111	0
UAB-T1-6_contig.fa_viral_227	18	20	13	15	2	13	25	13	27	24	26	35	4	3	1	23	15	9	11	10	18	16	124	31
UAB-T1-6_contig.fa_viral_228	3	7	1	8	1	3	5	3	0	0	0	0	0	0	0	0	0	0	3	0	2	2	215	71
UAB-T1-6_contig.fa_viral_229	225	119	38	90	40	73	106	45	29	84	103	120	26	41	20	85	316	182	79	22	22	55	473	297
UAB-T1-6_contig.fa_viral_230	17	86	9	47	0	13	49	33	0	0	0	0	0	0	0	0	0	0	0	0	0	21	141	95
UAB-T1-6_contig.fa_viral_231	2	12	0	12	1	0	3	0	1	0	0	0	1	3	0	0	0	0	2	0	1	7	112	60
UAB-T1-6_contig.fa_viral_232	4	7	0	38	0	3	23	7	0	0	0	1	0	0	0	0	1	0	24	2	5	13	152	27
UAB-T1-6_contig.fa_viral_233	0	0	4	1	0	0	0	1	0	1	0	0	0	1	0	3	2	1	0	0	1	0	63	28
UAB-T1-6_contig.fa_viral_234	41	8	1	8	1	4	18	3	0	11	37	18	0	0	0	26	59	13	17	5	9	3	104	38
UAB-T1-6_contig.fa_viral_235	5	9	0	40	4	2	18	8	0	0	6	4	0	0	1	3	16	9	19	0	4	11	149	48
RC-T1-9_contig.fa_viral_102	34	178	196	122	83	137	94	160	71	46	98	40	111	53	121	88	23	25	199	289	294	175	146	139
RC-T1-9_contig.fa_viral_103	0	0	1	0	2	0	0	2	0	0	0	0	18	81	121	0	0	0	0	0	0	0	1	1
RC-T1-9_contig.fa_viral_104	0	0	0	0	0	0	0	0	0	0	8	0	2	0	5777	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_105	0	0	0	0	1	0	0	0	0	0	0	0	0	0	141	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_106	0	0	0	0	0	3	0	0	0	0	0	0	0	7	63	0	0	0	0	2	1	0	0	0
RC-T1-9_contig.fa_viral_107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	249	0	0	0	0	0	0	0	0	0
RC-T1-9_contig.fa_viral_108	110	115	32	32	99	42	35	34	14	11	59	35	258	237	324	40	58	23	41	31	12	49	400	55
RC-T1-9_contig.fa_viral_109	0	0	0	0	0	0	0	0	0	0	0	0	0	0	149	0	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	159	49	26	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_4	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	29	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_5	0	0	0	0	0	0	0	0	0	16	1	2	0	0	0	56	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	235	65	36	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_7	0	0	0	0	0	0	0	0	0	28	11	9	0	0	0	165	10	5	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	200	89	65	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	17	4	0	0	0	0	1	0
RP-T1-3_contig.fa_provirus_10	2	2	4	0	8	6	2	4	6	29	3	3	6	10	14	116	1	5	0	0	0	2	2	6
RP-T1-3_contig.fa_provirus_11	0	0	0	0	0	0	0	0	6	5	13	8	0	0	0	171	0	11	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_12	15	0	0	0	1	0	0	0	0	3	1	0	0	0	0	89	58	30	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_13	3	5	6	6	5	6	5	7	6	6	8	5	1	3	2	124	86	20	5	4	6	3	8	4
RP-T1-3_contig.fa_provirus_14	0	0	0	0	0	2	0	0	1	8	14	11	0	0	0	220	12	45	0	1	0	0	2	2
RP-T1-3_contig.fa_provirus_15	0	1	0	0	0	0	1	1	1	11	31	29	2	0	1	111	2	7	0	2	0	0	2	1
RP-T1-3_contig.fa_provirus_16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0	1	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_17	14	9	3	9	0	4	14	6	8	13	4	33	0	0	0	165	321	112	15	11	2	6	32	8
RP-T1-3_contig.fa_provirus_19	0	0	0	0	0	0	0	1	1	0	4	0	0	0	0	144	4	16	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_20	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	202	128	36	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_22	0	0	0	0	0	0	0	0	0	11	3	0	0	0	0	60	24	8	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_23	3	0	0	0	0	0	0	0	0	29	1	1	0	0	0	74	49	35	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_24	0	0	0	0	1	0	1	0	1	33	0	1	0	0	0	73	48	17	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_25	1	0	0	1	0	0	0	0	1	2	1	2	0	0	0	47	3	3	1	0	0	0	0	0
RP-T1-3_contig.fa_provirus_26	1	2	1	1	0	2	0	1	3	13	6	4	0	0	0	166	57	54	4	1	0	1	4	1
RP-T1-3_contig.fa_provirus_27	0	0	0	0	0	0	0	0	0	15	6	2	0	0	0	94	2	24	0	2	1	0	1	0
RP-T1-3_contig.fa_provirus_28	0	0	0	0	0	0	0	0	0	7	2	8	0	0	0	60	9	4	0	1	0	1	1	0
RP-T1-3_contig.fa_provirus_29	0	0	0	0	0	0	0	0	2	10	13	3	0	0	0	90	9	8	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_30	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	12	0	2	0	0	0	0	0	0
RP-T1-3_contig.fa_provirus_31	4	7	8	10	3	13	9	9	15	19	48	32	2	1	0	78	4	13	15	9	6	9	4	6
RP-T1-3_contig.fa_provirus_32	0	0	2	1	0	2	1	2	5	38	8	12	0	0	0	82	3	29	3	3	2	3	0	2
RP-T1-3_contig.fa_viral_1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	154	0	5	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_2	377	383	265	333	184	319	243	293	285	505	464	543	208	141	135	1537	732	562	491	404	408	249	569	291
RP-T1-3_contig.fa_viral_3	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	102	10	14	1	0	0	1	1	0
RP-T1-3_contig.fa_viral_4	2	0	0	0	0	0	0	0	0	18	4	0	1	0	0	86	33	15	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	478	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_6	10	27	28	12	7	22	14	20	20	11	20	38	0	4	1	166	108	56	11	19	17	12	27	7
RP-T1-3_contig.fa_viral_7	3	1	1	0	2	2	1	0	3	12	5	4	0	2	3	86	4	23	1	0	4	4	11	3
RP-T1-3_contig.fa_viral_8	2	2	1	4	1	2	4	1	6	545	385	332	0	0	0	2092	16	104	4	0	3	1	5	2
RP-T1-3_contig.fa_viral_9	1	0	0	0	0	0	0	0	3	1	1	3	0	0	0	104	0	5	1	1	0	3	2	2
RP-T1-3_contig.fa_viral_10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	93	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_11	0	0	0	1	0	0	0	0	2	32	0	10	0	0	0	158	9	80	1	0	1	0	0	0
RP-T1-3_contig.fa_viral_12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	135	0	4	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_13	2	65	53	49	16	45	33	51	36	14	49	7	22	17	28	186	0	19	58	136	143	66	43	41
RP-T1-3_contig.fa_viral_14	0	0	0	0	0	0	0	0	0	8	8	5	0	0	0	118	43	7	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_15	0	0	0	0	0	0	0	0	6	2	16	10	0	0	0	126	2	10	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_16	0	3	0	5	1	2	3	1	6	9	4	8	0	0	0	348	1	8	0	10	18	10	3	0
RP-T1-3_contig.fa_viral_18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	107	29	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_19	8	6	6	16	1	5	37	31	7	36	57	52	0	1	1	192	4	37	62	75	107	23	20	14
RP-T1-3_contig.fa_viral_20	0	0	0	0	0	0	0	1	30	220	57	17	0	0	0	1529	2	321	0	0	1	1	0	2
RP-T1-3_contig.fa_viral_22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	195	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_23	1	0	1	1	2	8	7	1	13	23	5	0	0	0	0	244	64	77	8	2	8	3	3	1
RP-T1-3_contig.fa_viral_24	1	3	0	2	0	8	1	0	1	10	0	0	0	0	0	165	49	35	9	2	4	1	4	4
RP-T1-3_contig.fa_viral_25	0	0	0	0	0	0	0	0	0	12	7	0	0	0	0	110	0	8	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	80	18	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	172	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_28	12	13	6	14	14	20	8	8	43	47	28	10	5	4	23	207	20	29	8	14	4	9	18	11
RP-T1-3_contig.fa_viral_29	0	0	0	0	1	0	2	0	41	127	24	2	0	0	0	185	2	28	0	0	0	3	1	0
RP-T1-3_contig.fa_viral_30	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	221	411	293	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	95	3	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_32	1	2	3	20	5	8	67	39	30	44	11	11	0	0	0	340	6	89	27	37	97	48	29	17
RP-T1-3_contig.fa_viral_33	0	0	1	5	0	1	6	9	20	37	6	4	0	0	0	183	0	43	1	3	4	9	1	1
RP-T1-3_contig.fa_viral_34	0	0	0	3	0	0	1	3	1	1	0	0	0	0	0	244	127	44	2	4	0	2	3	3
RP-T1-3_contig.fa_viral_35	57	52	24	24	23	37	58	47	36	72	79	54	33	21	33	211	122	84	53	30	33	32	85	44
RP-T1-3_contig.fa_viral_36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	96	0	0	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	133	24	18	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_38	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	104	21	2	0	0	0	0	0	0
RP-T1-3_contig.fa_viral_39	112	76	53	79	25	54	43	25	36	87	104	281	69	50	35	208	317	142	72	30	18	28	154	106