Published July 5, 2024 | Version v1
Dataset Open

Root images for testing concatenation and statistical analysis with RhizoVision Explorer

Authors/Creators

  • 1. ROR icon Oak Ridge National Laboratory

Description

Thresholded images of cleaned and scanned roots as described for a paper entitled:

"Divide and conquer: Using RhizoVision Explorer to aggregate data from multiple root scans using image concatenation and statistical methods"

The zip file contains two main folders for Original and Concatenated images. Each contains a subfolder for the 3 different image sets for switchgrass, poplar, and petaland (which also includes some arctic samples). Original images include multiple scans of the same sample where the sample is denoted as a letter. Concatenated images were generated in python combining multiple scans of the same sample into one large image based on the common letter.

Check out the paper.

Download Python code for concatenation.

Download R code for statistics.

Files

RhizoVision Concatenation Images.zip

Files (569.9 MB)

Name Size Download all
md5:6cc639e0dbcc916918b4f01af8fb5d42
569.9 MB Preview Download