lib/Sanger/CGP/Vagrent/Annotators/ComplexIndelAnnotator.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
subroutine | 16 | 17 | 94.1 |
pod | n/a |
line | count | pod | subroutine |
---|---|---|---|
25 | 1 | n/a | BEGIN |
27 | 1 | n/a | BEGIN |
29 | 1 | n/a | BEGIN |
30 | 1 | n/a | BEGIN |
31 | 1 | n/a | BEGIN |
32 | 1 | n/a | BEGIN |
33 | 1 | n/a | BEGIN |
35 | 1 | n/a | BEGIN |
42 | 230 | n/a | _getAnnotation |
80 | 227 | n/a | _generateAnnotatonGroup |
136 | 227 | n/a | _buildRNAAnnotation |
298 | 79 | n/a | _getMutantStringForCDSAnno |
305 | 79 | n/a | _getCDSDescriptionString |
316 | 18 | n/a | _getMutatedCdsSequence |
324 | 215 | n/a | _generateDNAindelDescriptionString |
367 | 79 | n/a | _getDefaultCDSAnnotationType |
371 | 0 | n/a | _getDefaultProteinAnnotationType |