Subroutine Coverage

lib/Sanger/CGP/Vagrent/Data/Transcript.pm
Criterion Covered Total %
subroutine 31 40 77.5
pod 27 30 90.0


line count pod subroutine
25 4 n/a BEGIN
26 4 n/a BEGIN
27 4 n/a BEGIN
28 4 n/a BEGIN
29 4 n/a BEGIN
30 4 n/a BEGIN
32 4 n/a BEGIN
46 0 Yes new
55 0 n/a _init
109 818 No getAllGeneTypes
113 5808 Yes getGeneType
117 1636 Yes getCCDS
121 1636 Yes getGeneName
125 5858 Yes getAccession
129 2518 Yes getAccessionVersion
133 882 Yes getProteinAccession
137 882 Yes getProteinAccessionVersion
141 3400 Yes getDatabase
145 3400 Yes getDatabaseVersion
149 1745 Yes getExons
150 33955 n/a __ANON__
154 519 No getExonsGenomicOrder
155 10490 n/a __ANON__
159 19488 Yes getStrand
163 1052 Yes getcDNASeq
167 1344 Yes getCdsSeq
172 441 Yes getCdsPhase
176 3670 Yes getCdsMinPos
180 3486 Yes getCdsMaxPos
184 745 Yes getCdsLength
192 0 No getmRNALength
205 0 Yes getGenomicMinPos
209 0 Yes getGenomicMaxPos
213 4172 Yes isProteinCoding
221 707 Yes getProteinCodingType
225 0 Yes getMicroRnaType
229 111 Yes getLincRnaType
233 0 Yes getSnoRnaType
237 0 Yes getSnRnaType
241 0 Yes getRRnaType