lib/Sanger/CGP/Vagrent/TranscriptSource/FileBasedTranscriptSource.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
subroutine | 16 | 21 | 76.1 |
pod | 2 | 2 | 100.0 |
line | count | pod | subroutine |
---|---|---|---|
25 | 4 | n/a | BEGIN |
27 | 4 | n/a | BEGIN |
28 | 4 | n/a | BEGIN |
29 | 4 | n/a | BEGIN |
30 | 4 | n/a | BEGIN |
32 | 4 | n/a | BEGIN |
33 | 4 | n/a | BEGIN |
35 | 4 | n/a | BEGIN |
36 | 4 | n/a | BEGIN |
37 | 4 | n/a | BEGIN |
38 | 4 | n/a | BEGIN |
50 | 1724 | Yes | getTranscripts |
61 | 0 | Yes | getTranscriptsForNextGeneInDumpRegion |
85 | 0 | n/a | _getTranascriptsForGeneName |
99 | 0 | n/a | _getDumpTranscriptStore |
107 | 0 | n/a | _populateGeneList |
117 | 0 | n/a | _generateLocationString |
122 | 1724 | n/a | _getTranscriptsFromCache |
145 | 862 | n/a | _init |
155 | 862 | n/a | _setCacheFile |
178 | 1704 | n/a | _getTranscriptSeq |