Sanger::CGP::Vagrent::Data::Deletion - Data object representing a deletion
This is a data class describing a deletion plotted to a genome.
It inherits from Sanger::CGP::Vagrent::Data::AbstractGenomicPosition and Sanger::CGP::Vagrent::Data::AbstractVariation
my $del = Sanger::CGP::Vagrent::Data::Deletion->new(%params);
Builds a new Sanger::CGP::Vagrent::Data::Deletion object
Sanger::CGP::Vagrent::Data::Deletion object initialized with parameter values
Same as the constructor from Sanger::CGP::Vagrent::Data::AbstractGenomicPosition plus
delseq => the deleted sequence fragment
my $seq = $del->getDeletedSequence;
Returns the deleted sequence fragment
String - DNA sequence
print $variant->toString;
Returns a simple string representation of the variant in hgvs genomic syntax
String