Subroutine Coverage

lib/Sanger/CGP/Vagrent/Data/Annotation.pm
Criterion Covered Total %
subroutine 40 41 97.5
pod 31 31 100.0


line count pod subroutine
25 4 n/a BEGIN
26 4 n/a BEGIN
27 4 n/a BEGIN
28 4 n/a BEGIN
29 4 n/a BEGIN
31 4 n/a BEGIN
32 4 n/a BEGIN
64 1700 Yes new
73 1700 n/a _init
145 3324 Yes getCDSAnnotationContext
149 4455 Yes getmRNAAnnotationContext
153 2141 Yes getProteinAnnotationContext
157 308 Yes getSubstitutionAnnotationType
161 546 Yes getDeletionAnnotationType
165 458 Yes getComplexAnnotationType
169 374 Yes getInsertionAnnotationType
173 40 Yes getFrameShiftAnnotationType
177 1674 Yes getUnknownAnnotationType
181 478 Yes getPositionKnownSubtype
185 965 Yes getPositionOffsetSubtype
189 1674 Yes getPositionOffSequenceSubtype
193 3910 Yes getMinPos
197 4191 Yes getMaxPos
201 2062 Yes getMinOffset
205 2034 Yes getMaxOffset
209 1824 Yes getWt
213 1970 Yes getMt
217 1741 Yes getDescription
221 13512 Yes getContext
225 1700 Yes getType
229 1989 Yes getSubtype
233 1700 Yes getAccession
237 1700 Yes getSequenceVersion
241 1700 Yes getDatabase
245 1700 Yes getDatabaseVersion
249 0 Yes getSequenceLength
253 2840 Yes addClassification
257 1518 n/a __ANON__
266 9741 Yes getClassifications
272 7843 Yes hasClassification
274 16135 n/a __ANON__