Subroutine Coverage

lib/Sanger/CGP/Vagrent/Annotators/SimpleSubstitutionAnnotator.pm
Criterion Covered Total %
subroutine 21 21 100.0
pod n/a


line count pod subroutine
25 1 n/a BEGIN
27 1 n/a BEGIN
29 1 n/a BEGIN
30 1 n/a BEGIN
31 1 n/a BEGIN
32 1 n/a BEGIN
33 1 n/a BEGIN
35 1 n/a BEGIN
37 1 n/a BEGIN
44 156 n/a _getAnnotation
82 154 n/a _generateAnnotatonGroup
130 154 n/a _buildRNAAnnotation
303 56 n/a _getWildTypeStringForCDSAnno
310 56 n/a _getMutantStringForCDSAnno
317 56 n/a _getCDSDescriptionString
330 10 n/a _getMutatedCdsSequence
336 10 n/a _getCdsMinPosForProteinCalculation
341 10 n/a _getCdsMaxPosForProteinCalculation
346 4 n/a _isStartGained
384 56 n/a _getDefaultCDSAnnotationType
388 2 n/a _getDefaultProteinAnnotationType