Sanger::CGP::Vagrent::GenomicRegionDumper::SubstitutionGenomicRegionDumper - Class for saving regions of the genome that would provide annotations for Substitution variation types.
This is an implementation of the AbstractGenomicRegionDumper to handle substitution type variants, ie any kind of variant that cannot have an effect on sequence length and only effect a single wildtype base
Using the supplied TranscriptSource, Transcripts that could generate annotations are selected and the relevent genomic regions are saved to the specified GenomicRegionWriter
Inherits from Sanger::CGP::Vagrent::GenomicRegionDumper::AbstractGenomicRegionDumper.
See Sanger::CGP::Vagrent::GenomicRegionDumper::AbstractGenomicRegionDumper