Published May 17, 2024 | Version v2.1.2
Software Open

AnushaPB/wingen: wingen 2.1.2

Creators

  • 1. UC Berkeley

Description

Patch to fix L argument defaults and improve documentation.

The wingen default for all functions is now L = "nvariants", which sets L to the number of variants in the VCF when calculating pi. This was already the default in the original window_gd() function, but circle_gd() and resist_gd() had L = NULL as the default, which returns the sum over SNPs of nucleotide diversity. We have also improved documentation for L.

Files

AnushaPB/wingen-v2.1.2.zip

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Additional details

Related works

Is supplement to
Software: https://github.com/AnushaPB/wingen/tree/v2.1.2 (URL)