{ "name": "bionomia-attributions", "id": "e0ebf2a1-3656-468a-b0b6-1aa93ff43fef", "licenses": [ { "name": "cc-by-4.0", "path": "http://creativecommons.org/licenses/by/4.0/legalcode" } ], "profile": "tabular-data-package", "title": "ATTRIBUTIONS MADE FOR: The nematodes collection (IN) of the Muséum national d'Histoire naturelle (MNHN - Paris)", "description": "The national collection of parasitic nematodes, established in the 19th century, \nhas developed since 1960 and its present diversity makes it one of the top three collections in the world. \nFor parasites of vertebrates, it covers all groups of Secernentea (clades III, IV, V): Rhadiasides, Cosmocercides, Ascarides, \nOxyurida, Spirurides, Trichostrongles, Metastrongles etc., while Adenophorea groups (clade I), are well represented \n(Trichinelloidea) or rare (Muspiceoidea) in the collection. \nFor the arthopod parasites, Oxyurida and Rhigonematides make up the bulk of the collection. \nThe Tylenchida and Mermithida are less well represented, as are the parasites of oligochaetes and molluscs. \nSpecimens originate from around the world but tropical regions are particularly well represented. \nThey were collected during MNHN missions or were gifts of French and foreign colleagues. \nIn total the collection includes about 1000 lots of types, 2000 slides and over 25 000 lots in vials \n(a lot, preserved in 70% alcohol, corresponds to the sample taken from a host specimen and \nthus includes one to hundreds specimens, fixed in hot alcohol, or more rarely in 5-10% formalin).", "datasetKey": "e0ebf2a1-3656-468a-b0b6-1aa93ff43fef", "doi": "https://doi.org/10.5281/zenodo.10503771", "homepage": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef", "created": "2024-04-23T08:23:49+00:00", "sources": [ { "title": "The nematodes collection (IN) of the Muséum national d'Histoire naturelle (MNHN - Paris)", "path": "https://doi.org/10.15468/6edbze" } ], "keywords": [ "specimen", "museum", "collection", "credit", "attribution", "bionomia" ], "image": "https://bionomia.net/images/logo.png", "resources": [ { "name": "users", "description": "List of unique people that have either claimed or been attributed occurrence records through examination of either dwc:recordedBy or dwc:identifiedBy. Wikidata-based people contain some demographic information.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "id", "type": "integer" }, { "name": "name", "type": "string", "skos:exactMatch": "http://schema.org/name" }, { "name": "familyName", "type": "string", "skos:exactMatch": "http://schema.org/familyName" }, { "name": "particle", "type": "string" }, { "name": "givenName", "type": "string", "skos:exactMatch": "http://schema.org/givenName" }, { "name": "alternateName", "type": "array", "skos:exactMatch": "http://schema.org/alternateName" }, { "name": "sameAs", "type": "string", "format": "uri", "skos:exactMatch": "http://schema.org/sameAs" }, { "name": "orcid", "type": "string" }, { "name": "wikidata", "type": "string" }, { "name": "birthDate", "type": "date", "skos:exactMatch": "https://schema.org/birthDate" }, { "name": "birthDatePrecision", "type": "string", "description": "Values are year, month, or day and indicate the precision of birthDate; portions of birthDate should be ignored below that of the birthDatePrecision." }, { "name": "deathDate", "type": "date", "skos:exactMatch": "https://schema.org/deathDate" }, { "name": "deathDatePrecision", "type": "string", "description": "Values are year, month, or day and indicate the precision of deathDate; portions of deathDate should be ignored below that of the deathDatePrecision." } ] }, "primaryKey": "id", "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/users.csv.zip", "compression": "zip", "bytes": 538, "hash": "2bc1f85449ddaa902bb6e4e0552d2bf8" }, { "name": "problem-determiner-dates", "description": "Associated occurrence records whose dateIdentified are earlier than a determiner's birthDate or later than their deathDate.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "occurrence_id", "type": "integer" }, { "name": "catalogNumber", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/catalogNumber" }, { "name": "user_id", "type": "integer" }, { "name": "wikidata", "type": "string" }, { "name": "birthDate", "type": "date", "skos:exactMatch": "https://schema.org/birthDate" }, { "name": "birthDatePrecision", "type": "string", "description": "Values are year, month, or day and indicate the precision of birthDate; portions of birthDate should be ignored below that of the birthDatePrecision." }, { "name": "deathDate", "type": "date", "skos:exactMatch": "https://schema.org/deathDate" }, { "name": "deathDatePrecision", "type": "string", "description": "Values are year, month, or day and indicate the precision of deathDate; portions of deathDate should be ignored below that of the deathDatePrecision." }, { "name": "dateIdentified", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/dateIdentified" } ] }, "foreignKeys": [ { "fields": "user_id", "reference": { "resource": "users", "fields": "id" } }, { "fields": "occurrence_id", "reference": { "resource": "occurrences", "fields": "gbifID" } } ], "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/problem_determiner_dates.csv.zip", "compression": "zip", "bytes": 237, "hash": "c66cf7daffb431820fb08c4dfc3fff98" }, { "name": "problem-collector-dates", "description": "Associated occurrence records whose eventDates are earlier than a collector's birthDate or later than their deathDate.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "occurrence_id", "type": "integer" }, { "name": "catalogNumber", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/catalogNumber" }, { "name": "user_id", "type": "integer" }, { "name": "wikidata", "type": "string" }, { "name": "birthDate", "type": "date", "skos:exactMatch": "https://schema.org/birthDate" }, { "name": "birthDatePrecision", "type": "string", "description": "Values are year, month, or day and indicate the precision of birthDate; portions of birthDate should be ignored below that of the birthDatePrecision." }, { "name": "deathDate", "type": "date", "skos:exactMatch": "https://schema.org/deathDate" }, { "name": "deathDatePrecision", "type": "string", "description": "Values are year, month, or day and indicate the precision of deathDate; portions of deathDate should be ignored below that of the deathDatePrecision." }, { "name": "eventDate", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/eventDate" }, { "name": "year", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/year" } ] }, "foreignKeys": [ { "fields": "user_id", "reference": { "resource": "users", "fields": "id" } }, { "fields": "occurrence_id", "reference": { "resource": "occurrences", "fields": "gbifID" } } ], "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/problem_collector_dates.csv.zip", "compression": "zip", "bytes": 233, "hash": "44e31a18ff51731fd412d190dea7bcf0" }, { "name": "occurrences", "description": "Occurrence records shared to GBIF, limited to those linked to a collector or determiner.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "gbifID", "type": "integer" }, { "name": "datasetKey", "type": "string", "format": "uuid", "skos:exactMatch": "http://rs.gbif.org/terms/1.0/datasetKey" }, { "name": "license", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/license" }, { "name": "occurrenceID", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/occurrenceID" }, { "name": "basisOfRecord", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/basisOfRecord" }, { "name": "dateIdentified", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/dateIdentified" }, { "name": "decimalLatitude", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/decimalLatitude" }, { "name": "decimalLongitude", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/decimalLongitude" }, { "name": "country", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/country" }, { "name": "countryCode", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/countryCode" }, { "name": "eventDate", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/eventDate" }, { "name": "year", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/year" }, { "name": "kingdom", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/kingdom" }, { "name": "family", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/family" }, { "name": "identifiedBy", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/identifiedBy" }, { "name": "institutionCode", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/institutionCode" }, { "name": "collectionCode", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/collectionCode" }, { "name": "catalogNumber", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/catalogNumber" }, { "name": "recordedBy", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/recordedBy" }, { "name": "scientificName", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/scientificName" }, { "name": "typeStatus", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/typeStatus" }, { "name": "recordedByID", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/recordedByID" }, { "name": "identifiedByID", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/identifiedByID" } ] }, "primaryKey": "gbifID", "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/occurrences.csv.zip", "compression": "zip", "bytes": 1863, "hash": "f41dc97332ae144f362a8ab8b4d6c252" }, { "name": "unascribed", "description": "Negative assertions made alongside the provenance, which may help inform local disambiguation activities.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "occurrence_id", "type": "integer" }, { "name": "catalogNumber", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/catalogNumber" }, { "name": "recordedBy", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/recordedeBy" }, { "name": "recordedByID", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/recordedByID" }, { "name": "identifiedBy", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/identifiedBy" }, { "name": "identifiedByID", "type": "string", "skos:exactMatch": "http://rs.tdwg.org/dwc/terms/identifiedByID" }, { "name": "differentFrom", "type": "string", "skos:exactMatch": "http://www.w3.org/2002/07/owl#differentFrom" }, { "name": "user_id", "type": "integer" }, { "name": "name", "type": "string", "skos:exactMatch": "http://schema.org/name" }, { "name": "wikidata", "type": "string" }, { "name": "orcid", "type": "string" }, { "name": "createdBy", "type": "string", "skos:exactMatch": "http://schema.org/name" }, { "name": "createdByURI", "type": "string", "format": "uri" }, { "name": "createdDateTime", "type": "datetime", "format": "any" }, { "name": "modifiedDateTime", "type": "datetime", "format": "any" } ] }, "foreignKeys": [ { "fields": "occurrence_id", "reference": { "resource": "occurrences", "fields": "gbifID" } }, { "fields": "user_id", "reference": { "resource": "users", "fields": "id" } } ], "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/not_them_assertions.csv.zip", "compression": "zip", "bytes": 21867, "hash": "ceab1435d79b328e000ef9bb951013b0" }, { "name": "article-occurrences", "description": "A join table between occurrence and article to permit examination of particular occurrence records that were included in a GBIF download and later used in a published article.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "article_id", "type": "integer" }, { "name": "occurrence_id", "type": "integer" } ] }, "foreignKeys": [ { "fields": "article_id", "reference": { "resource": "articles", "fields": "id" } }, { "fields": "occurrence_id", "reference": { "resource": "occurrences", "fields": "gbifID" } } ], "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/citations.csv.zip", "compression": "zip", "bytes": 225, "hash": "eef3eebac620bbccb53670b63441dd3e" }, { "name": "attributions", "description": "Details about the provenance for an attributed or claimed occurrence record.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "user_id", "type": "integer" }, { "name": "occurrence_id", "type": "integer" }, { "name": "identifiedBy", "type": "string", "format": "uri", "skos:exactMatch": "http://rs.tdwg.org/dwc/iri/identifiedBy" }, { "name": "recordedBy", "type": "string", "format": "uri", "skos:exactMatch": "http://rs.tdwg.org/dwc/iri/recordedBy" }, { "name": "createdBy", "type": "string", "skos:exactMatch": "http://schema.org/name" }, { "name": "createdByURI", "type": "string", "format": "uri" }, { "name": "createdDateTime", "type": "datetime", "format": "any" }, { "name": "modifiedDateTime", "type": "datetime", "format": "any" } ] }, "foreignKeys": [ { "fields": "user_id", "reference": { "resource": "users", "fields": "id" } }, { "fields": "occurrence_id", "reference": { "resource": "occurrences", "fields": "gbifID" } } ], "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/attributions.csv.zip", "compression": "zip", "bytes": 863, "hash": "6e4e5b2198fce493cd15a8762d91e34d" }, { "name": "articles", "description": "Published articles whose authors had downloaded and referenced a data package from GBIF containing occurrences that are linked to collectors or determiners.", "format": "csv", "mediatype": "text/csv", "encoding": "utf-8", "profile": "tabular-data-resource", "schema": { "fields": [ { "name": "id", "type": "integer" }, { "name": "reference", "type": "string", "skos:exactMatch": "http://schema.org/name" }, { "name": "sameAs", "type": "string", "format": "uri", "skos:exactMatch": "http://schema.org/sameAs" }, { "name": "datasets", "type": "array", "format": "uri", "skos:exactMatch": "http://schema.org/sameAs" } ] }, "primaryKey": "id", "path": "https://bionomia.net/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef/articles.csv.zip", "compression": "zip", "bytes": 752, "hash": "34b9c87c6c7dcf1b6ca771fb65253937" } ] }