Add measure of cell complexity/novelty (log10PerUMI) for data QC.
Add_Cell_Complexity_Seurat(
seurat_object,
meta_col_name = "log10GenesPerUMI",
assay = "RNA",
overwrite = FALSE
)
object name.
name to use for new meta data column. Default is "log10GenesPerUMI".
assay to use in calculation. Default is "RNA". Note This should only be changed if storing corrected and uncorrected assays in same object (e.g. outputs of both Cell Ranger and Cell Bender).
Logical. Whether to overwrite existing an meta.data column. Default is FALSE meaning that
function will abort if column with name provided to meta_col_name
is present in meta.data slot.
A Seurat Object