Published January 29, 2024
| Version v0.0.1
Software
Open
Graph-based Nanopore Adaptive Sampling Typing (GNASTy)
Description
Scripts for a Graph-based Nanopore Adaptive Sampling tool, known as 'GNASTy' (Graph Nanopore Adaptive Sampling Typing, pronounced 'nasty'), which is a modification of Readfish. This repository contains code from the original Readfish tool from Payne et al. 2021 (available here: https://github.com/LooseLab/readfish, publication: https://www.nature.com/articles/s41587-020-00746-x). If you use this software, please cite the original Readfish paper.
Files
readfish-GraphAlignment-v0.0.1.zip
Files
(1.4 MB)
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Additional details
Related works
- Is version of
- Software: 10.1038/s41587-020-00746-x (DOI)