Dynamics of dominance: maneuvers, contests, and assessment in the posture-scale movements of interacting zebrafish

This is the dataset of the paper "Dynamics of dominance: maneuvers, contests, and assessment in the posture-scale movements of interacting zebrafish".

Contents

Very useful data

1. tracking_results.zip. This file contains the tracking results for all 22 experiments. This is the most useful file to download.
2. fight_detection_data.zip. This file contains the data that was originally clustered to build the fight detector (see the paper). This is the same data that you need if you want to use the fight detector yourself.

Other data

1. Files of the form FishTank*.zip. These contain the raw output of idtracker.ai and SLEAP that were used to track the experiments. These files are only useful if you want to re-track from the very beginning. Even then, a slightly modified verison of this data is available in tracking_results.zip (for all experiments), and that may be what you want. These files are mainly for posterity.
2. PCA_data.zip. This is cached data that can be recomputed from the trajectory data. See the paper, and the code in the github.
3. tmat_and_infomap_generation_data.zip & infomap_data.zip & infomap_tau_sweep_data.zip. These contain the output of the calculations for the main infomap calculation, and the tau sweep calculation. See the paper and github.

Code

See https://github.com/liamshock/Dynamics_of_dominance