PMC5428745	sm1	(s1,unspecified_Gibbs sampling,feature selection)
PMC5428745	sm2	(s1,unspecified_PCA,dimensionality reduction)
PMC5428745	sm3	(s1,t-SNE,dimensionality reduction)
PMC5428745	sm4	(s1,Monocle,trajectory)
PMC5428745	sm5	(s1,DPT,trajectory)
PMC5428745	sm6	(s1,Wishbone,trajectory)
PMC5428745	sm7	(s1,MFA,trajectory)
PMC5465230	sm1	(s1,unspecified_SVM,quality control)
PMC5465230	sm2	(s1,FastQC,quality control)
PMC5465230	sm3	(s1,Kraken,quality control)
PMC5465230	sm4	(s1,RNA-SeQC,quality control)
PMC5465230	sm5	(s1,unspecified_PCA,quality control)
PMC5465230	sm6	(s1,HTSeq,quantification)
PMC5465230	sm7	(s1,RSEM,quantification)
PMC5465230	sm8	(s1,WemIQ,quantification)
PMC5465230	sm9	(s1,featureCounts,quantification)
PMC5465230	sm10	(s1,Cufflinks,quantification)
PMC5465230	sm11	(s1,UMI,quantification)
PMC5465230	sm12	(s1,STAR,quantification)
PMC5465230	sm13	(s1,DESeq2,normalization)
PMC5465230	sm14	(s1,edgeR,normalization)
PMC5465230	sm15	(s1,unspecified_PCA,clustering)
PMC5465230	sm16	(s1,kernel pca,clustering)
PMC5465230	sm17	(s1,rpca,clustering)
PMC5465230	sm18	(s1,BackSPIN,clustering)
PMC5465230	sm19	(s1,t-SNE,clustering)
PMC5465230	sm20	(s1,ZIFA,dimensionality reduction)
PMC5465230	sm21	(s1,RaceID,rare cells)
PMC5465230	sm22	(s1,Wanderlust,trajectory)
PMC5465230	sm23	(s1,unspecified_minimum spanning trees,trajectory)
PMC5465230	sm24	(s1,Monocle,trajectory)
PMC5465230	sm25	(s1,unspecified_ICA,dimensionality reduction)
PMC5465230	sm26	(s1,Waterfall,trajectory)
PMC5465230	sm27	(s1,WGCNA,networks)
PMC5465230	sm28	(s1,unspecified_ODE,regulatory)
PMC5465230	sm29	(s1,unspecified_PCA,variable genes)
PMC6158772	sm1	(s1,mRMR,feature selection)
PMC6158772	sm2	(s1,MRMD,feature selection)
PMC6158772	sm3	(s1,CLR,feature selection)
PMC6158772	sm4	(s1,SKI-Cox,feature selection)
PMC6158772	sm5	(s1,wLASSO-Cox,feature selection)
PMC6158772	sm6	(s1,RP-CLR,feature selection)
PMC6158772	sm7	(s1,PCU-CLR,feature selection)
PMC6158772	sm8	(s1,BVS-CLR,feature selection)
PMC6158772	sm9	(s1,WL2Boost,feature selection)
PMC6158772	sm10	(s1,PQLBoost,feature selection)
PMC6158772	sm11	(s1,pttest,differential expression)
PMC6158772	sm12	(s1,mpttest,differential expression)
PMC6158772	sm13	(s1,fcpttest,differential expression)
PMC6158772	sm14	(s1,unspecified_normalization,normalization)
PMC6158772	sm15	(s1,unspecified_classification,classification)
PMC6417818	sm1	(s1,Mapper,dimensionality reduction)
PMC6417818	sm2	(s1,Mapper,visualization)
PMC6417818	sm3	(s1,t-SNE,dimensionality reduction)
PMC6417818	sm4	(s1,t-SNE,visualization)
PMC6417818	sm5	(s1,unspecified_PCA,dimensionality reduction)
PMC6417818	sm6	(s1,unspecified_PCA,visualization)
PMC6417818	sm7	(s1,Isomap,dimensionality reduction)
PMC6417818	sm8	(s1,Isomap,visualization)
PMC6417818	sm9	(s1,LLE,dimensionality reduction)
PMC6417818	sm10	(s1,LLE,visualization)
PMC6417818	sm11	(s1,Spectral Embedding,dimensionality reduction)
PMC6417818	sm12	(s1,Spectral Embedding,visualization)
PMC6417818	sm13	(s1,Monocle,visualization)
PMC6417818	sm14	(s1,unspecified_filter,quality control
PMC6417818	sm15	(s1,unspecified_filter,variable genes)
PMC6417818	sm16	(s1,Mapper,normalization)
PMC6417818	sm17	(s1,Mapper,clustering)
PMC6417818	sm18	(s1,Mapper,networks)
PMC6417818	sm19	(s1,lmQCM,clustering)
PMC6417818	sm20	(s1,ToppGene,gene set enrichment)
PMC6468969	sm1	(s1,STAR,alignment)
PMC6468969	sm2	(s1,Seurat,quality control)
PMC6468969	sm3	(s1,Seurat,clustering)
PMC6468969	sm4	(s1,Seurat,differential expression)
PMC6468969	sm5	(s1,Seurat,marker genes)
PMC6468969	sm6	(s1,unspecified,variable genes)
PMC6468969	sm7	(s1,unspecified_PCA,dimensionality reduction)
PMC6468969	sm8	(s1,t-SNE,visualization)
PMC6468969	sm9	(s1,ssGSEA,gene set enrichment)
PMC6468969	sm10	(s1,Monocle,variable genes)
PMC6468969	sm11	(s1,Monocle,marker genes)
PMC6468969	sm12	(s1,Monocle,clustering)
PMC6468969	sm13	(s1,Monocle,trajectory)
PMC6468969	sm14	(s1,Monocle,visualization)
PMC6687332	sm1	(s1,Cellranger,alignment)
PMC6687332	sm2	(s1,Cellranger,quality control)
PMC6687332	sm3	(s1,Cellranger,quantification)
PMC6687332	sm4	(s1,unspecified_CCA,integration)
PMC6687332	sm5	(s1,t-SNE,dimensionality reduction)
PMC6687332	sm6	(s1,Seurat,clustering)
PMC6687332	sm7	(s1,Seurat,marker genes)
PMC6687332	sm8	(s1,t-SNE,visualization)
PMC6687332	sm9	(s1,SingleR,classification)
PMC6687332	sm10	(s1,Seurat,differential expression)
PMC6687332	sm11	(s1,Monocle,trajectory)
PMC6687332	sm12	(s1,ClusterProfiler,gene set enrichment)
PMC6687332	sm13	(s1,Gorilla,gene set enrichment)
PMC6945013	sm1	(s1,STAR,alignment)
PMC6945013	sm2	(s1,Subread,quantification)
PMC6945013	sm3	(s1,DESeq2,differential expression)
PMC6945013	sm4	(s1,MatrixEQTL,regulatory)
PMC6956120	sm1	(s1,Seurat,quality control)
PMC6956120	sm2	(s1,Seurat,variable genes)
PMC6956120	sm3	(s1,unspecified_PCA,clustering)
PMC6956120	sm4	(s1,t-SNE,dimensionality reduction)
PMC6956120	sm5	(s1,unspecified_negative_binomial,differential expression)
PMC6956120	sm6	(s1,DAVID,gene set enrichment)
PMC6956120	sm7	(s1,GeneHancer,regulatory)
PMC7033300	sm1	(s1,SingleSplice,alternative splicing)
PMC7033300	sm2	(s1,ISOform-Patterns,alternative splicing)
PMC7033300	sm3	(s1,unspecified_logistic_regression,alternative splicing)
PMC7033300	sm4	(s1,MISO,alternative splicing)
PMC7033300	sm5	(s1,WemIQ,alternative splicing)
PMC7033300	sm6	(s1,BRIE,alternative splicing)
PMC7033300	sm7	(s1,UCSC genome browser,visualization)
PMC7033300	sm8	(s1,IGV,visualization)
PMC7033300	sm9	(s1,ggsashimi,visualization)
PMC7033300	sm10	(s1,Millefy,visualization)
PMC7033300	sm11	(s1,VALERIE,visualization)
PMC7033300	sm12	(s1,Mandalorion,alternative splicing)
PMC7057921	sm1	(s1,TrimGalore,quality control)
PMC7057921	sm2	(s1,STAR,alignment)
PMC7057921	sm3	(s1,STAR-Fusion,alignment)
PMC7057921	sm4	(s1,Kallisto,alignment)
PMC7057921	sm5	(s1,AltAnalyze,quantification)
PMC7057921	sm6	(s1,unspecified_hierarchical_clustering,clustering)
PMC7057921	sm7	(s1,unspecified_PCA,feature selection)
PMC7057921	sm8	(s1,SC3,clustering)
PMC7057921	sm9	(s1,unspecified_differential_expression,differential expression)
PMC7057921	sm10	(s1,GeneMANIA,networks)
PMC7057921	sm11	(s1,STRING,networks)
PMC7079336	sm1	(s1,Cellranger,alignment)
PMC7079336	sm2	(s1,Cellranger,CNV calling)
PMC7079336	sm3	(s2,Cellranger,alignment)
PMC7079336	sm4	(s2,Cellranger,quantification)
PMC7079336	sm5	(s2,LIAYSON,CNV calling)
PMC7079336	sm6	(s1,BIONJ,tree inference)
PMC7079336	sm7	(s2,BIONJ,tree inference)
PMC7079336	sm8	(s2,unspecified_hierarchical_clustering,clustering)
PMC7079336	sm9	(s1,unspecified_hierarchical_clustering,tree inference)
PMC7079336	sm10	(s2,unspecified_hierarchical_clustering,tree inference)
PMC7079336	sm11	(s2,GSVA,gene set enrichment)
PMC7079336	sm12	(s2,Seurat,differential expression)
PMC7079336	sm13	(s2,Seurat,marker genes)
PMC7079336	sm14	(s2,UMAP,visualization)
PMC7079336	sm15	(s2,t-SNE,visualization)
PMC7079336	sm16	(s2,unspecified,clustering)
PMC7184133	sm1	(s1,unspecified_CCA,batch correction)
PMC7184133	sm2	(s1,Seurat,variable genes)
PMC7184133	sm3	(s1,t-SNE,visualization)
PMC7184133	sm4	(s3,CLARANS,clustering)
PMC7184133	sm5	(s3,DWLS,deconvolution)
PMC7184133	sm6	(s2,pheatmap,clustering)
PMC7184133	sm7	(s2,unspecified_GO enrichment,gene set enrichment)
PMC7184133	sm8	(s2,BackSPIN,clustering)
PMC7184133	sm9	(s2,HOMER,regulatory)
PMC7184133	sm10	(s1,Bowtie,alignment)
PMC7184133	sm11	(s1,RSEM,quantification)
PMC7184133	sm12	(s1,WGCNA,networks)
PMC7184133	sm13	(s1,unspecified_CCA,batch correction)
PMC7184133	sm14	(s1,Seurat,variable genes)
PMC7184133	sm15	(s1,Seurat,dimensionality reduction)
PMC7184133	sm16	(s1,t-SNE,visualization)
PMC7200215	sm1	(s1,Cellranger,quantification)
PMC7200215	sm2	(s1,scDAPA,peak calling)
PMC7200215	sm3	(s1,BEDtools-merge,peak calling)
PMC7200215	sm4	(s1,scDAPA,differential expression)
PMC7200215	sm5	(s1,Subread,quantification)
PMC7200215	sm6	(s1,unspecified_alignment,alignment)
PMC7200215	sm7	(s1,Sierra,peak calling)
PMC7200215	sm8	(s1,Genomicalignments,quantification)
PMC7334875	sm1	(s1,Cellranger,quantification)
PMC7334875	sm2	(s1,STAR,alignment)
PMC7334875	sm3	(s1,Seurat,quality control)
PMC7334875	sm4	(s1,Seurat,dimensionality reduction)
PMC7334875	sm5	(s1,UMAP,visualization)
PMC7391988	sm1	(s1,sceasy,visualization)
PMC7391988	sm2	(s1,t-SNE,visualization)
PMC7391988	sm3	(s1,UMAP,visualization)
PMC7391988	sm4	(s1,iSEE,visualization)
PMC7391988	sm5	(s1,scSVA,visualization)
PMC7391988	sm6	(s1,scOPE,visualization)
PMC7391988	sm7	(s1,UCSC genome browser,visualization)
PMC7391988	sm8	(s1,single cell explorer,visualization)
PMC7391988	sm9	(s1,scRan,visualization)
PMC7391988	sm10	(s1,ASAP,visualization)
PMC7391988	sm11	(s1,Bbrowser,visualization)
PMC7391988	sm12	(s1,cellxgene,visualization)
PMC7391988	sm13	(s1,Granatum,visualization)
PMC7391988	sm14	(s1,loom-viewer,visualization)
PMC7391988	sm15	(s1,Loupe cell browswer,visualization)
PMC7391988	sm16	(s1,scVI,visualization)
PMC7391988	sm17	(s1,SPRING,visualization)
PMC7391988	sm18	(s1,Seurat,unspecified)
PMC7391988	sm19	(s1,scanpy,unspecified)
PMC7557106	sm1	(s1,UMAP,visualization)
PMC7557106	sm2	(s1,bcl2fastq,transformation)
PMC7557106	sm3	(s1,Cellranger,quantification)
PMC7557106	sm4	(s1,Seurat,quality control)
PMC7557106	sm5	(s1,Seurat,normalization)
PMC7557106	sm6	(s1,Seurat,variable genes)
PMC7557106	sm7	(s1,Seurat,dimensionality reduction)
PMC7557106	sm8	(s1,Seurat,clustering)
PMC7557106	sm9	(s1,Seurat,visualization)
PMC7557106	sm10	(s1,Seurat,marker genes)
PMC7610308	sm1	(s1,Cellranger,alignment)
PMC7610308	sm2	(s1,t-SNE,visualization)
PMC7610308	sm3	(s1,GSEA,gene set enrichment)
PMC7610308	sm4	(s1,SCENIC,regulatory)
PMC7610308	sm5	(s1,GSVA,gene set enrichment)
PMC7644053	sm1	(s2,STAR,alignment)
PMC7644053	sm2	(s2,Subread,quantification)
PMC7644053	sm3	(s2,DESeq2,differential expression)
PMC7644053	sm4	(s1,Cellranger,alignment
PMC7644053	sm5	(s1,Cellranger,quantification)
PMC7644053	sm6	(s1,Seurat,integration)
PMC7644053	sm7	(s1,Seurat,clustering)
PMC7644053	sm8	(s1,Seurat,marker genes)
PMC7644053	sm9	(s1,Seurat,visualization)
PMC7644053	sm10	(s1,slingshot,trajectory)
PMC7644053	sm11	(s1,GenePattern,gene set enrichment)
PMC7644053	sm12	(s2,prcomp,dimensionality reduction)
PMC7671304	sm1	(s1,TrimGalore,alignment
PMC7671304	sm2	(s1,Bowtie,alignment)
PMC7671304	sm3	(s1,RSEM,quantification)
PMC7671304	sm4	(s2,ISNorm,normalization)
PMC7671304	sm5	(s2,DESeq2,normalization)
PMC7671304	sm6	(s2,DESeq2,differential expression)
PMC7671304	sm7	(s2,scRan,normalization)
PMC7671304	sm8	(s2,SCnorm,normalization)
PMC7671304	sm9	(s2,Splatter,simulation)
PMC7671304	sm10	(s1,ISNorm,normalization)
PMC7671304	sm11	(s1,scMerge,batch correction)
PMC7671304	sm12	(s3,chromVAR,regulatory)
PMC7671304	sm13	(s2,unspecified_PCA,dimensionality reduction)
PMC7671315	sm1	(s1,Splatter,simulation)
PMC7671315	sm2	(s2,scanpy,variable genes)
PMC7671315	sm3	(s2,scziDesk,clustering)
PMC7671315	sm4	(s2,scDesk,clustering)
PMC7671315	sm5	(s2,CIDR,clustering)
PMC7671315	sm6	(s2,SIMLR,clustering)
PMC7671315	sm7	(s2,SOUP,clustering)
PMC7671315	sm8	(ś2,scDeepCluster,clustering)
PMC7671315	sm9	(s2,RaceID,rare cells)
PMC7671315	sm10	(s2,t-SNE,visualization)
PMC7671315	sm11	(s2,UMAP,visualization)
PMC7671315	sm12	(s2,Seurat,differential expression)
PMC7737787	sm1	(s1,STAR,alignment)
PMC7737787	sm2	(s1,SAMtools,alignment)
PMC7737787	sm3	(s1,Seurat,quantification)
PMC7737787	sm4	(s1,Seurat,clustering)
PMC7737787	sm5	(s1,Seurat,marker genes)
PMC7737787	sm6	(s1,Seurat,visualization)
PMC7737787	sm7	(s1,DESeq2,normalization)
PMC7737787	sm8	(s1,DESeq2,differential expression)
PMC7737787	sm9	(s1,GSVA,gene set enrichment)
PMC7775989	sm1	(s1,cutadapt,alignment)
PMC7775989	sm2	(s1,STAR,alignment)
PMC7775989	sm3	(s1,RSEM,quantification)
PMC7775989	sm4	(s1,Seurat,clustering)
PMC7775989	sm5	(s1,Seurat,batch correction)
PMC7775989	sm6	(s1,unspecified_PCA,dimensionality reduction
PMC7775989	sm7	(s1,runUMAP,visualization)
PMC7775989	sm8	(s1,PISA,alignment)
PMC7775989	sm9	(s1,sambamba,alignment)
PMC7775989	sm10	(s1,PISA,quantification)
PMC7775989	sm11	(s1,Harmony,integration)
PMC7775989	sm12	(s1,Seurat,marker genes)
PMC7775989	sm13	(s1,Monocle,trajectory)
PMC7775989	sm14	(s1,tracer,TCR)
PMC7775989	sm15	(s1,GSVA,gene set enrichment)
PMC7775989	sm16	(s1,CellPhoneDB,networks)
PMC7775989	sm17	(s1,ggplot2,visualization)
PMC7902236	sm1	(s1,PanglaoDB,alignment)
PMC7902236	sm2	(s1,scMappR,classification)
PMC7902236	sm3	(s1,Seurat,normalization)
PMC7902236	sm4	(s1,Seurat,clustering)
PMC7902236	sm5	(s1,Seurat,integration)
PMC7902236	sm6	(s1,GSVA,gene set enrichment)
PMC7902236	sm7	(s1,CellMarker,gene set enrichment)
PMC7902236	sm8	(s1,PanglaoDB,gene set enrichment)
PMC8168129	sm1	(s1,Seurat,clustering)
PMC8168129	sm2	(s1,Seurat,marker genes)
PMC8168129	sm3	(s1,DAVID,gene set enrichment)
PMC8168129	sm4	(s1,WGCNA,networks)

PMC8181206	sm1	(s1,Cellranger,alignment)
PMC8181206	sm2	(s1,Cellranger,quantification)
PMC8181206	sm3	(s1,Seurat,quality control)
PMC8181206	sm4	(s1,Seurat,normalization)
PMC8181206	sm5	(s1,Seurat,dimensionality reduction)
PMC8181206	sm6	(s1,Seurat,marker genes)
PMC8181206	sm7	(s1,t-SNE,visualization)
PMC8181206	sm8	(s1,Monocle,trajectory)
PMC8181206	sm9	(s1,CellTalker,networks)
PMC8181206	sm10	(s1,CellPhoneDB,networks)
PMC8181206	sm11	(s1,chromVAR,regulatory)
PMC8181206	sm12	(s1,FIMO,regulatory)
PMC8181206	sm13	(s1,singleR2,classification)
PMC8181206	sm14	(s1,singleR2,differential expression)
PMC8181206	sm15	(s2,Cellranger,alignment)
PMC8181206	sm16	(s2,Cellranger,quantification)
PMC8181206	sm17	(s2,signac,peak calling)
PMC8181206	sm18	(s2,t-SNE,dimensionality reduction)
PMC8181206	sm19	(s2,signac,marker genes)
PMC8187165	sm1	(s1,SC3,clustering)
PMC8187165	sm2	(s1,Seurat,clustering)
PMC8187165	sm3	(s1,t-SNE,clustering)
PMC8187165	sm4	(s1,SparseDC,clustering)
PMC8187165	sm5	(s1,scDA,clustering)
PMC8187165	sm6	(s1,unspecified_PCA,clustering)
PMC8187228	sm1	(s1,Cellranger,alignment)
PMC8187228	sm2	(s1,Cellranger,quantification)
PMC8187228	sm3	(s1,Seurat,normalization)
PMC8187228	sm4	(s1,Seurat,variable genes)
PMC8187228	sm5	(s1,unspecified_PCA,dimensionality reduction)
PMC8187228	sm6	(s1,Seurat,clustering)
PMC8187228	sm7	(s1,Seurat,visualization)
PMC8187228	sm8	(s1,Seurat,normalization)
PMC8187228	sm9	(s1,Monocle,trajectory)
PMC8187228	sm10	(s1,velocyto,trajectory)
PMC8210883	sm1	(s1,TrimGalore,alignment)
PMC8210883	sm2	(s1,Bowtie,alignment)
PMC8210883	sm3	(s1,RSEM,quantification)
PMC8236117	sm1	(s1,STAR,alignment)
PMC8236117	sm2	(s1,unspecified_DBEC,quality control)
PMC8236117	sm3	(s1,unspecified,quantification)
PMC8236117	sm4	(s1,Seurat,quality control)
PMC8236117 	sm5	(s1,Harmony,integration)
PMC8236117	sm6	(s1,unspecified_pca,dimensionality reduction)
PMC8236117	sm7	(s1,t-SNE,clustering)
PMC8236117	sm8	(s1,Seurat,differential expression)
PMC8236117	sm9	(s1,Seurat,marker genes)
PMC8236117	sm10	(s1,ClusterProfiler,gene enrichment)
PMC8236117	sm11	(s1,SingleSeqGset,gene enrichment)
PMC8236117	sm12	(s1,inferCNV,CNV calling)
PMC8236117	sm13	(s1,t-SNE,clustering)
PMC8236117	sm14	(s1,Monocle,trajectory)
PMC8236117	sm15	(s1,Seurat,variable genes)
PMC8236117	sm16	(s1,Seurat,dimensionality reduction)
PMC8236117	sm17	(s2,ROTS,differential expression)
PMC8236117	sm18	(s2,TIMER2.0,gene enrichment)
PMC8356963	sm1	(s1,Seurat,normalization)
PMC8356963	sm2	(s1,Seurat,visualization)
PMC8356963	sm3	(s1,Seurat,variable genes)
PMC8356963	sm4	(s1,COTAN,variable genes)
PMC8356963	sm5	(s1,Enrichr,gene set enrichment)
PMC8356963	sm6	(s1,WGCNA,networks)
PMC8383063	sm1	(s1,Seurat,normalization)
PMC8383063	sm2	(s1,Seurat,variable genes)
PMC8383063	sm3	(s1,Seurat,clustering)
PMC8383063	sm4	(s1,Seurat,visualization)
PMC8558147	sm1	(s1,Cellranger,alignment)
PMC8558147	sm2	(s1,Cellranger,quantification)
PMC8558147	sm3	(s1,Seurat,quality control)
PMC8558147	sm4	(s1,Seurat,normalization)
PMC8558147	sm5	(s1,Seurat,variable genes)
PMC8558147	sm6	(s1,Seurat,dimensionality reduction)
PMC8558147	sm7	(s1,Seurat,clustering)
PMC8558147	sm8	(s1,Seurat,visualization)
PMC8558147	sm9	(s1,pheatmap,visualization)
PMC8558147	sm10	(s1,CellPhoneDB,networks)
PMC8558147	sm11	(s1,Cytoscape,visualization)
PMC8558147	sm12	(s1,Monocle,trajectory)
PMC8558147	sm13	(s1,Metascape,gene set enrichment)
PMC8558147	sm14	(s1,ggplot2,visualization)
PMC9072607	sm1	(s1,Cellranger,alignment)
PMC9072607	sm2	(s1,Cellranger,quantification)
PMC9072607	sm3	(s1,Seurat,normalization)
PMC9072607	sm4	(s1,Seurat,integration)
PMC9072607	sm5	(s1,Seurat,dimensionality reduction)
PMC9072607	sm6	(s1,Seurat,clustering)
PMC9072607	sm7	(s1,Seurat,differential expression)
PMC9072607	sm8	(s1,Seurat,marker genes)
PMC9072607	sm9	(s1,unspecified,classification)
PMC9072607	sm10	(s1,Seurat,clustering)
PMC9072607	sm11	(s1,Metascape,gene set enrichment)
PMC6027867	sm1	(s1,unspecified_hierarchical_clustering,clustering)
PMC6027867	sm2	(s1,unspecified_supervised_classification,clustering)
PMC6027867	sm3	(s1,unspecified,feature selection)
PMC6027867	sm4	(s1,unspecified_gene_regulatory_network,networks)
PMC6027867	sm5	(s1,unspecified_dynamic_bayesian_network,networks)
PMC6027867	sm6	(s2,unspecified_hierarchical_clustering,clustering)
PMC6027867	sm7	(s2,unspecified_supervised_classification,clustering)
PMC6027867	sm8	(s2,unspecified_attractor_analysis,networks)
PMC6027867	sm9	(s1,unspecified_gene_regulatory_network,clustering)
PMC6027867	sm10	(s1,gephi,visualization)
PMC6027867	sm11	(s1,unspecified_pathway_analysis,gene set enrichment)
PMC6417803	sm1	(s2,RSEM,quantification)
PMC6417803	sm2	(s2,SSCA,gene set enrichment)
PMC6417803	sm3	(s2,SSCVA,gene set enrichment)
PMC6417803	sm4	(s2,PLAGE,gene set enrichment)
PMC6417803	sm5	(s2,GSVA,gene set enrichment)
PMC6417803	sm6	(s2,ssGSEA,gene set enrichment)
PMC6417803	sm7	(s2,FP,gene set enrichment)
PMC6417803	sm8	(s1,SSCA,gene set enrichment)
PMC6417803	sm9	(s1,SSCVA,gene set enrichment)
PMC6417803	sm10	(s1,GSVA,gene set enrichment)
PMC6417803	sm11	(s1,PLAGE,gene set enrichment)
PMC6417803	sm12	(s1,ssGSEA,gene set enrichment)
PMC6417803	sm13	(s1,FP,gene set enrichment)
PMC6417803	sm14	(s1,unspecified_logistic_regression,classification)
PMC6417803	sm15	(s1,unspecified_gaussian_mixture_model,clustering)
PMC6844587	sm1	(s1,TMAP,alignment)
PMC6844587	sm2	(s1,TMAP,normalization)
PMC6844587	sm3	(s1,unspecified_PCA,dimensionality reduction)
PMC6844587	sm4	(s1,unspecified,differential expression)
PMC6844587	sm5	(s1,DAVID,gene set enrichment)
PMC7163294	sm1	(s1,unspecified_filter,quality control)
PMC7163294	sm2	(s1,UMI,quantification)
PMC7163294	sm3	(s1,edgeR,differential expression)
PMC7163294	sm4	(s1,scRan,normalization)
PMC7163294	sm5	(s1,ComBat,batch correction)
PMC7163294	sm6	(s1,MNNCorrect,batch correction)
PMC7163294	sm7	(s1,scMerge,batch correction)
PMC7163294	sm8	(s1,zinbwave,batch correction)
PMC7163294	sm9	(s1,unspecified_pseudobulk,batch correction)
PMC7163294	sm10	(s1,unspecified_fixed_effects_model,batch correction)
PMC7163294	sm11	(s1,unspecified_mixed_effects_model,batch correction)
PMC7163294	sm12	(s1,SVA,batch correction)
PMC7163294	sm13	(s1,cate,batch correction)
PMC7163294	sm14	(s1,dSVA,batch correction)
PMC7163294	sm15	(s1,CorrConf,batch correction)
PMC7163294	sm16	(s2,edgeR,normalization)
PMC7163294	sm17	(s2,edgeR,differential expression)
PMC7163294	sm18	(s1,Splatter,simulation)
PMC7202009	sm1	(s1,Drop-seq tools,quality control)
PMC7202009	sm2	(s1,STAR,alignment)
PMC7202009	sm3	(s1,Kallisto,alignment)
PMC7202009	sm4	(s1,Bowtie,alignment)
PMC7202009	sm5	(s1,TrimGalore,quality control)
PMC7202009	sm6	(s1,Cellranger,quality control)
PMC7202009	sm7	(s1,STARsolo,alignment)
PMC7202009	sm8	(s1,Seurat,quality control)
PMC7202009	sm9	(s1,Seurat,normalization)
PMC7202009	sm10	(s1,Seurat,clustering)
PMC7202009	sm11	(s1,Seurat,marker genes)
PMC7202009	sm12	(s1,Kallisto,alignment)
PMC7202009	sm13	(s1,bustools,quantification)
PMC7202009	sm14	(s1,STARsolo,alignment)
PMC7202009	sm15	(s1,Seurat,quality control)
PMC7202009	sm16	(s1,Seurat,normalization)
PMC7202009	sm17	(s1,Seurat,clustering)
PMC7202009	sm18	(s1,Seurat,marker genes)
PMC7202009	sm19	(s1,Kallisto,alignment)
PMC7202009	sm20	(s1,bustools,quantification)
PMC7202009	sm21	(s1,Subread,quantification)
