Dataset Open Access

Dataset: Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering

Thomas, Mridul K.; Fontana, Simone; Reyes, Marta; Pomati, Francesco


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.977773", 
  "title": "Dataset: Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering", 
  "issued": {
    "date-parts": [
      [
        2017, 
        9, 
        28
      ]
    ]
  }, 
  "abstract": "<p>This dataset contains all relevant data\u00a0for the manuscript (in submission) \"<em>Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering</em>\".</p>\n\n<p>Code written to analyse this dataset (which may be adapted for other flow cytometry datasets) is found at https://zenodo.org/record/999747</p>\n\n<p>--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------</p>\n\n<p>Naming convention for raw flow cytometry data files (located in /Script 3. Generating raw data subset/input/):</p>\n\n<p>[Allparameters] _ [Year] - [Month] - [Date]\u00a0 [Hour] [u] [Minute] _ [Depth]</p>\n\n<p>e.g:\u00a0Allparameters_2014-07-31 08u08_1.0m</p>\n\n<p>The date, time and depth indicate the location and time at which the measurement was taken.</p>", 
  "author": [
    {
      "family": "Thomas, Mridul K."
    }, 
    {
      "family": "Fontana, Simone"
    }, 
    {
      "family": "Reyes, Marta"
    }, 
    {
      "family": "Pomati, Francesco"
    }
  ], 
  "note": "We are presently using this dataset for multiple publications that are in preparation. To avoid duplicated efforts, we request that you contact the authors if you are interested in pursuing a research project with this data. \n\nContact information: \nMridul K. Thomas - mrit {at} dtu {dot} dk\nFrancesco Pomati - francesco {dot} pomati {at} eawag {dot} ch", 
  "type": "dataset", 
  "id": "977773"
}
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