Fine-scale environmentally associated spatial structure of Lumpfish ( Cyclopterus lumpus) across the Northwest Atlantic
Creators
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Langille, Barbara1
- Kess, Tony1
- Brachmann, Matthew1
- Nugent, Cameron1
- Messmer, Amber1
- Duffy, Steven1
- Holborn, Melissa1
- Van Wyngaarden, Mallory1
- Knutsen, Tim2
- Kent, Matthew3
- Boyce, Danny4
- Gregory, Robert1
- Gauthier, Johanne1
- Fairchild, Elizabeth5
- Pietrak, Michael6
- Eddy, Stephen7
- Garcia de Leaniz, Carlos8
- Consuegra, Sofia8
- Whittaker, Ben8
- Bentzen, Paul9
- Bradbury, Ian1
- 1. Fisheries and Oceans Canada
- 2. AquaGen (Norway)
- 3. Norwegian University of Life Sciences
- 4. Ocean Sciences Centre*
- 5. University of New Hampshire
- 6. United States Department of Agriculture
- 7. University of Maine Center for Cooperative Aquaculture Research*
- 8. Swansea University
- 9. Dalhousie University
Description
Lumpfish, Cyclopterus lumpus, have historically been harvested throughout Atlantic Canada and are increasingly in demand as a solution to controlling sea lice in Atlantic salmon farms – a process which involves both the domestication and the transfer of lumpfish between geographic regions. Here, we have 70K SNP array data and whole genome re-sequencing data (WGS) for a variety of sample sites across the Northwest Atlantic.
Notes
We mainly used R to manipulate data files, however, also used PGDspider to convert file formats, as well as plink v1.9.
Funding provided by: Fisheries and Oceans Canada
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100000041
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Funding provided by: Aquaculture Collaborative Research and Development Program*
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Funding provided by: Newfoundland Aquaculture Industry Association*
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Funding provided by: Grieg NL Seafarms Ltd*
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Funding provided by: Cooke Aquaculture Inc*
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Funding provided by: Mowi Canada East*
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Funding provided by: Program for Aquaculture Regulatory Research*
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