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TGuillerme/mulTree: v1.2.7

Thomas Guillerme; Kevin Healy

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  <dc:creator>Thomas Guillerme</dc:creator>
  <dc:creator>Kevin Healy</dc:creator>
2017/06/12 - v1.2.7
Minor fix to to properly deal with data frames.

2017/05/15 - v1.2.6
Removed caper dependencies.
Minor fixes to code internal documentation.
coda::gelman.diag in mulTree now only outputs a warning rather than a stop message
Allows R-structure's standrad multi-response model in as.mulTree (e.g. rand.terms  = ~taxa + specimen + us(trait):observation).

2017/01/09 - v1.2.5
Added minor sanitising function to mulTree the formula now has to match the data set column names.
Fixed a bug with the parallel option in mulTree: only one cluster is now generated at the start of the function rather than one at each iteration.
Fixed a minor bug with as.mulTree: the random terms formula's environment is not anymore exported by the function when set up by default.

2016/08/10 - v1.2.4
Fixed a bug in the convergence test where the convergence was not ran on the VCV matrix.
Models memory management is now safer and is done only out of R environment leading to minor speed improvements in mulTree function.
Some errors are now more verbose in mulTree and summary.mulTree.
Fixed bug with plot.mulTree that didn't allow to plot more than 5 parameters.

2016/07/06 - v1.2.3
External functions are now properly imported via the NAMESPACE.
New phylogenetic analysis markdown vignette!

2016/02/19 - v1.2.2
major bug fix in mulTree where models saved out of R environment where accumulating data from former models (now fixed: each model saved out of the R environment contains only data for the target model).

2016/01/25 - v1.2.1
minor bug fix in summary.mulTree that can now deal with multiple hdr for each probabilities.
minor bug fix in plot.mulTree with the number of terms used

  <dc:title>TGuillerme/mulTree: v1.2.7</dc:title>
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