Software Open Access
Thomas Guillerme; Kevin Healy
<?xml version='1.0' encoding='utf-8'?> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:adms="http://www.w3.org/ns/adms#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dct="http://purl.org/dc/terms/" xmlns:dctype="http://purl.org/dc/dcmitype/" xmlns:dcat="http://www.w3.org/ns/dcat#" xmlns:duv="http://www.w3.org/ns/duv#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:frapo="http://purl.org/cerif/frapo/" xmlns:geo="http://www.w3.org/2003/01/geo/wgs84_pos#" xmlns:gsp="http://www.opengis.net/ont/geosparql#" xmlns:locn="http://www.w3.org/ns/locn#" xmlns:org="http://www.w3.org/ns/org#" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:prov="http://www.w3.org/ns/prov#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:schema="http://schema.org/" xmlns:skos="http://www.w3.org/2004/02/skos/core#" xmlns:vcard="http://www.w3.org/2006/vcard/ns#" xmlns:wdrs="http://www.w3.org/2007/05/powder-s#"> <rdf:Description rdf:about="https://doi.org/10.5281/zenodo.806785"> <rdf:type rdf:resource="http://www.w3.org/ns/dcat#Dataset"/> <dct:type rdf:resource="http://purl.org/dc/dcmitype/Software"/> <dct:identifier rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://doi.org/10.5281/zenodo.806785</dct:identifier> <foaf:page rdf:resource="https://doi.org/10.5281/zenodo.806785"/> <dct:creator> <rdf:Description> <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/> <foaf:name>Thomas Guillerme</foaf:name> <org:memberOf> <foaf:Organization> <foaf:name>Imperial College London</foaf:name> </foaf:Organization> </org:memberOf> </rdf:Description> </dct:creator> <dct:creator> <rdf:Description> <rdf:type rdf:resource="http://xmlns.com/foaf/0.1/Agent"/> <foaf:name>Kevin Healy</foaf:name> <org:memberOf/> </rdf:Description> </dct:creator> <dct:title>TGuillerme/mulTree: v1.2.7</dct:title> <dct:publisher> <foaf:Agent> <foaf:name>Zenodo</foaf:name> </foaf:Agent> </dct:publisher> <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#gYear">2017</dct:issued> <dct:issued rdf:datatype="http://www.w3.org/2001/XMLSchema#date">2017-06-12</dct:issued> <owl:sameAs rdf:resource="https://zenodo.org/record/806785"/> <adms:identifier> <adms:Identifier> <skos:notation rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://zenodo.org/record/806785</skos:notation> <adms:schemeAgency>url</adms:schemeAgency> </adms:Identifier> </adms:identifier> <dct:relation rdf:resource="https://github.com/TGuillerme/mulTree/tree/v1.2.7"/> <dct:isVersionOf rdf:resource="https://doi.org/10.5281/zenodo.593013"/> <owl:versionInfo>v1.2.7</owl:versionInfo> <dct:description><ul> <li>2017/06/12 - <strong>v1.2.7</strong><ul> <li>Minor fix to <code>clean.data</code> to properly deal with data frames.</li> </ul> </li> <li>2017/05/15 - v1.2.6<ul> <li>Removed <code>caper</code> dependencies.</li> <li>Minor fixes to code internal documentation.</li> <li><code>coda::gelman.diag</code> in <code>mulTree</code> now only outputs a warning rather than a stop message</li> <li>Allows R-structure's standrad multi-response model in <code>as.mulTree</code> (e.g. <code>rand.terms = ~taxa + specimen + us(trait):observation</code>).</li> </ul> </li> <li>2017/01/09 - v1.2.5<ul> <li>Added minor sanitising function to <code>mulTree</code> the formula now has to match the data set column names.</li> <li>Fixed a bug with the <code>parallel</code> option in <code>mulTree</code>: only one cluster is now generated at the start of the function rather than one at each iteration.</li> <li>Fixed a minor bug with <code>as.mulTree</code>: the random terms formula's environment is not anymore exported by the function when set up by default.</li> </ul> </li> <li>2016/08/10 - v1.2.4<ul> <li>Fixed a bug in the convergence test where the convergence was not ran on the VCV matrix.</li> <li>Models memory management is now safer and is done only out of R environment leading to minor speed improvements in <code>mulTree</code> function.</li> <li>Some errors are now more verbose in <code>mulTree</code> and <code>summary.mulTree</code>.</li> <li>Fixed bug with <code>plot.mulTree</code> that didn't allow to plot more than 5 parameters.</li> </ul> </li> <li>2016/07/06 - v1.2.3<ul> <li>External functions are now properly imported via the <code>NAMESPACE</code>.</li> <li>New phylogenetic analysis markdown vignette!</li> </ul> </li> <li>2016/02/19 - v1.2.2<ul> <li>major bug fix in <code>mulTree</code> where models saved out of <code>R</code> environment where accumulating data from former models (now fixed: each model saved out of the <code>R</code> environment contains only data for the target model).</li> </ul> </li> <li>2016/01/25 - v1.2.1<ul> <li>minor bug fix in <code>summary.mulTree</code> that can now deal with multiple hdr for each probabilities.</li> <li>minor bug fix in <code>plot.mulTree</code> with the number of terms used</li> </ul> </li> </ul></dct:description> <dct:accessRights rdf:resource="http://publications.europa.eu/resource/authority/access-right/PUBLIC"/> <dct:accessRights> <dct:RightsStatement rdf:about="info:eu-repo/semantics/openAccess"> <rdfs:label>Open Access</rdfs:label> </dct:RightsStatement> </dct:accessRights> <dcat:distribution> <dcat:Distribution> <dcat:accessURL rdf:resource="https://doi.org/10.5281/zenodo.806785"/> </dcat:Distribution> </dcat:distribution> <dcat:distribution> <dcat:Distribution> <dcat:accessURL>https://doi.org/10.5281/zenodo.806785</dcat:accessURL> <dcat:byteSize>6837192</dcat:byteSize> <dcat:downloadURL>https://zenodo.org/record/806785/files/TGuillerme/mulTree-v1.2.7.zip</dcat:downloadURL> <dcat:mediaType>application/zip</dcat:mediaType> </dcat:Distribution> </dcat:distribution> </rdf:Description> </rdf:RDF>
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