Software Open Access
TGuillerme/mulTree: v1.2.7
Thomas Guillerme; Kevin Healy
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<dct:description><ul> <li>2017/06/12 - <strong>v1.2.7</strong><ul> <li>Minor fix to <code>clean.data</code> to properly deal with data frames.</li> </ul> </li> <li>2017/05/15 - v1.2.6<ul> <li>Removed <code>caper</code> dependencies.</li> <li>Minor fixes to code internal documentation.</li> <li><code>coda::gelman.diag</code> in <code>mulTree</code> now only outputs a warning rather than a stop message</li> <li>Allows R-structure's standrad multi-response model in <code>as.mulTree</code> (e.g. <code>rand.terms = ~taxa + specimen + us(trait):observation</code>).</li> </ul> </li> <li>2017/01/09 - v1.2.5<ul> <li>Added minor sanitising function to <code>mulTree</code> the formula now has to match the data set column names.</li> <li>Fixed a bug with the <code>parallel</code> option in <code>mulTree</code>: only one cluster is now generated at the start of the function rather than one at each iteration.</li> <li>Fixed a minor bug with <code>as.mulTree</code>: the random terms formula's environment is not anymore exported by the function when set up by default.</li> </ul> </li> <li>2016/08/10 - v1.2.4<ul> <li>Fixed a bug in the convergence test where the convergence was not ran on the VCV matrix.</li> <li>Models memory management is now safer and is done only out of R environment leading to minor speed improvements in <code>mulTree</code> function.</li> <li>Some errors are now more verbose in <code>mulTree</code> and <code>summary.mulTree</code>.</li> <li>Fixed bug with <code>plot.mulTree</code> that didn't allow to plot more than 5 parameters.</li> </ul> </li> <li>2016/07/06 - v1.2.3<ul> <li>External functions are now properly imported via the <code>NAMESPACE</code>.</li> <li>New phylogenetic analysis markdown vignette!</li> </ul> </li> <li>2016/02/19 - v1.2.2<ul> <li>major bug fix in <code>mulTree</code> where models saved out of <code>R</code> environment where accumulating data from former models (now fixed: each model saved out of the <code>R</code> environment contains only data for the target model).</li> </ul> </li> <li>2016/01/25 - v1.2.1<ul> <li>minor bug fix in <code>summary.mulTree</code> that can now deal with multiple hdr for each probabilities.</li> <li>minor bug fix in <code>plot.mulTree</code> with the number of terms used</li> </ul> </li> </ul></dct:description>
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| All versions | This version | |
|---|---|---|
| Views | 292 | 6 |
| Downloads | 16 | 1 |
| Data volume | 107.0 MB | 6.8 MB |
| Unique views | 272 | 6 |
| Unique downloads | 14 | 1 |
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- June 12, 2017
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