Software Open Access
ReproNim/simple_workflow: Release 1.1.0
Satrajit Ghosh; Yaroslav Halchenko; Jean-Baptiste Poline; David Kennedy
Addressed issues with paper version 1
- docker image to repeat the analysis: docker pull repronim/simple_workflow:latest
- SimplePrep.sh script updated to check for requirements, install local environment without touching user's existing environment, and run small test with 1 subject. (with the option to run longer test by activating a different environment)
- working directory and prov files stored in the output folder
- docker output is now the reference
- circleci integration now uses docker to test and hence passes (since we run a 2 subject test on circleci, and the run workflow script allows one to specify number of participants, the check_output script allows ignoring missing participants)
- thanks to @yarikoptic, the docker generator can allow to adjust basic things like debian and fsl versions.
- cleaner environment.yml file that works on OSX and linux platforms
- README updated
Files
(2.2 MB)
| Name | Size | |
|---|---|---|
|
ReproNim/simple_workflow-1.1.0.zip
md5:783c1e425a13a11dd239825fbda1a5b3 |
2.2 MB | Download |
71
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views
downloads
| All versions | This version | |
|---|---|---|
| Views | 71 | 71 |
| Downloads | 8 | 8 |
| Data volume | 17.2 MB | 17.2 MB |
| Unique views | 64 | 64 |
| Unique downloads | 6 | 6 |
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- Publication date:
- May 30, 2017
- DOI:
-
- Related identifiers:
- Supplement to
- License (for files):
- Other (Open)