March 3, 2023 Software Open Access

Bob Yantosca; Melissa Sulprizio; Lizzie Lundgren; kelvinhb; Christoph Keller; Thibaud Fritz; 22degrees; David Ridley; Haipeng Lin; Liam Bindle; michael-s-long; Sebastian David Eastham; tsherwen; Will Downs; Jenny Fisher; Colin Thackray; Christopher Holmes; GanLuo; Jiawei Zhuang; Lee Murray; SpaceMouse; laestrada; Joshua Shutter; noelleselin; Michael Long; xin-chen-github; emily-ramnarine; gianga; Dr. Jessica Haskins; Jourdan-He

DataCite XML Export

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  <identifier identifierType="DOI">10.5281/zenodo.7696632</identifier>
  <creators>
    <creator>
      <creatorName>Bob Yantosca</creatorName>
      <affiliation>Harvard John A. Paulson School of Engineering and Applied Sciences</affiliation>
    </creator>
    <creator>
      <creatorName>Melissa Sulprizio</creatorName>
      <affiliation>Harvard University</affiliation>
    </creator>
    <creator>
      <creatorName>Lizzie Lundgren</creatorName>
    </creator>
    <creator>
      <creatorName>kelvinhb</creatorName>
    </creator>
    <creator>
      <creatorName>Christoph Keller</creatorName>
    </creator>
    <creator>
      <creatorName>Thibaud Fritz</creatorName>
      <affiliation>Massachusetts Institute of Technology</affiliation>
    </creator>
    <creator>
      <creatorName>22degrees</creatorName>
    </creator>
    <creator>
      <creatorName>David Ridley</creatorName>
    </creator>
    <creator>
      <creatorName>Haipeng Lin</creatorName>
      <affiliation>Harvard University</affiliation>
    </creator>
    <creator>
      <creatorName>Liam Bindle</creatorName>
    </creator>
    <creator>
      <creatorName>michael-s-long</creatorName>
    </creator>
    <creator>
      <creatorName>Sebastian David Eastham</creatorName>
      <affiliation>Massachusetts Institute of Technology</affiliation>
    </creator>
    <creator>
      <creatorName>tsherwen</creatorName>
    </creator>
    <creator>
      <creatorName>Will Downs</creatorName>
    </creator>
    <creator>
      <creatorName>Jenny Fisher</creatorName>
      <affiliation>University of Wollongong</affiliation>
    </creator>
    <creator>
      <creatorName>Colin Thackray</creatorName>
    </creator>
    <creator>
      <creatorName>Christopher Holmes</creatorName>
      <affiliation>Florida State University</affiliation>
    </creator>
    <creator>
      <creatorName>GanLuo</creatorName>
      <affiliation>ASRC, SUNY-Albany</affiliation>
    </creator>
    <creator>
      <creatorName>Jiawei Zhuang</creatorName>
      <affiliation>Harvard University</affiliation>
    </creator>
    <creator>
      <creatorName>Lee Murray</creatorName>
      <affiliation>University of Rochester</affiliation>
    </creator>
    <creator>
      <creatorName>SpaceMouse</creatorName>
    </creator>
    <creator>
      <creatorName>laestrada</creatorName>
    </creator>
    <creator>
      <creatorName>Joshua Shutter</creatorName>
      <affiliation>University of Minnesota</affiliation>
    </creator>
    <creator>
      <creatorName>noelleselin</creatorName>
    </creator>
    <creator>
      <creatorName>Michael Long</creatorName>
    </creator>
    <creator>
      <creatorName>xin-chen-github</creatorName>
    </creator>
    <creator>
      <creatorName>emily-ramnarine</creatorName>
    </creator>
    <creator>
      <creatorName>gianga</creatorName>
    </creator>
    <creator>
      <creatorName>Dr. Jessica Haskins</creatorName>
    </creator>
    <creator>
      <creatorName>Jourdan-He</creatorName>
    </creator>
  </creators>
  <titles>
    <title>geoschem/geos-chem: GEOS-Chem 14.1.1</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2023</publicationYear>
  <dates>
    <date dateType="Issued">2023-03-03</date>
  </dates>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/7696632</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsSupplementTo">https://github.com/geoschem/geos-chem/tree/14.1.1</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.1343546</relatedIdentifier>
  </relatedIdentifiers>
  <version>14.1.1</version>
  <rightsList>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;Release date: 03 Mar 2023&lt;/p&gt;
CHANGELOG
Added
&lt;ul&gt;
&lt;li&gt;New integration test functions in &lt;code&gt;test/GCClassic/integration&lt;/code&gt; and &lt;code&gt;test/GCHP/integration&lt;/code&gt;&lt;/li&gt;
&lt;li&gt;New parallelization test functions in &lt;code&gt;test/GCClassic/parallel&lt;/code&gt;&lt;/li&gt;
&lt;li&gt;Added &lt;code&gt;README.md&lt;/code&gt; files for integration and parallelization tests in the &lt;code&gt;test&lt;/code&gt; folder structure&lt;/li&gt;
&lt;li&gt;Added GCHP integration test for the tagO3 simulation&lt;/li&gt;
&lt;li&gt;Added GCHP and GCClassic integration tests for the carbon simulation&lt;/li&gt;
&lt;li&gt;Integration and parallelization test folders have been separated into subdirectories to minimize clutter.&lt;/li&gt;
&lt;li&gt;GEOS-only updates&lt;/li&gt;
&lt;li&gt;Add &lt;code&gt;about&lt;/code&gt; to GitHub issue templates (ensures they will be displayed)&lt;/li&gt;
&lt;li&gt;Added &lt;code&gt;.github/ISSUE_TEMPLATE/config.yml&lt;/code&gt; file w/ Github issue options&lt;/li&gt;
&lt;/ul&gt;
Changed
&lt;ul&gt;
&lt;li&gt;GCClassic integration tests now use a single set of scripts&lt;/li&gt;
&lt;li&gt;GCHP integration tests now use a single set of scripts&lt;/li&gt;
&lt;li&gt;Integration test run directories are created with the default names assigned by &lt;code&gt;createRunDir.sh&lt;/code&gt;&lt;/li&gt;
&lt;li&gt;Several bash functions in &lt;code&gt;test/shared/commonFunctionsForTests.sh&lt;/code&gt; have been combined so that they will work for both GCClassic and GCHP integration tests&lt;/li&gt;
&lt;li&gt;&lt;code&gt;./cleanRunDir.sh&lt;/code&gt; functions now take an argument for non-interactive execution (facilitates integration &amp;amp; parallelization tests)&lt;/li&gt;
&lt;li&gt;Moved several module variables from &lt;code&gt;GeosCore/ucx_mod.F90&lt;/code&gt; to &lt;code&gt;Headers/state_chm_mod.F90&lt;/code&gt;.  This facilitates using GEOS-Chem in CESM.&lt;/li&gt;
&lt;li&gt;Time cycle flags EFYO are changed to CYS for all GCClassic integration/parallel tests, and for GCClassic fullchem_benchmarksimulations.&lt;/li&gt;
&lt;li&gt;Ask users for the name of their research institution at registration&lt;/li&gt;
&lt;li&gt;Ask users for the name of their PI at registration&lt;/li&gt;
&lt;li&gt;Do not compile GCHP for tagO3 integration tests; use the default build instead&lt;/li&gt;
&lt;li&gt;Moved GC-Classic sample run scripts to operational_examples/harvard_cannon&lt;/li&gt;
&lt;li&gt;The GitHub PR template is now named &lt;code&gt;./github/PULL_REQUEST_TEMPLATE.md&lt;/code&gt;&lt;/li&gt;
&lt;/ul&gt;
Fixed
&lt;ul&gt;
&lt;li&gt;Fixed bug in where writing species metadata yaml file write was always attempted&lt;/li&gt;
&lt;li&gt;Prevent a warning from being generated when compiling &lt;code&gt;gckpp_Jacobian.F90&lt;/code&gt;&lt;/li&gt;
&lt;li&gt;Fixed a bug in routine GET_IJ where X and Y were swapped in an IF comparison.&lt;/li&gt;
&lt;/ul&gt;
Removed
&lt;ul&gt;
&lt;li&gt;Removed &lt;code&gt;intTest*_slurm.sh&lt;/code&gt;, &lt;code&gt;intTest_*lsf.sh&lt;/code&gt;, and &lt;code&gt;intTest*_interactive.sh&lt;/code&gt; integration test scripts&lt;/li&gt;
&lt;li&gt;Removed State_Met%LWI and input meteorology LWI from carbon simulation run config files&lt;/li&gt;
&lt;li&gt;Removed function &lt;code&gt;CLEANUP_UCX&lt;/code&gt;; deallocations are now done in &lt;code&gt;state_chm_mod.F90&lt;/code&gt;&lt;/li&gt;
&lt;/ul&gt;
&lt;p&gt;&lt;strong&gt;Full Changelog&lt;/strong&gt;: &lt;a href="https://github.com/geoschem/geos-chem/compare/14.1.0...14.1.1"&gt;https://github.com/geoschem/geos-chem/compare/14.1.0...14.1.1&lt;/a&gt;&lt;/p&gt;</description>
  </descriptions>
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