Journal article Open Access

Optimization of supervised cluster analysis for extracting reference tissue input curves in (R)-[(11)C]PK11195 brain PET studies.

Yaqub, Maqsood; van Berckel, Bart NM; Schuitemakers, Alie; Hinz, Rainer; Turkheimer, Federico E; Tomasi, Giampaolo; Lammertsma, Adriaan A; Boellaard, Ronald


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    "doi": "10.1038/jcbfm.2012.59", 
    "description": "<p>Performance of two supervised cluster analysis (SVCA) algorithms for extracting reference tissue curves was evaluated to improve quantification of dynamic (R)-[(11)C]PK11195 brain positron emission tomography (PET) studies. Reference tissues were extracted from images using both a manually defined cerebellum and SVCA algorithms based on either four (SVCA4) or six (SVCA6) kinetic classes. Data from controls, mild cognitive impairment patients, and patients with Alzheimer&#39;s disease were analyzed using various kinetic models including plasma input, the simplified reference tissue model (RPM) and RPM with vascular correction (RPMV(b)). In all subject groups, SVCA-based reference tissue curves showed lower blood volume fractions (V(b)) and volume of distributions than those based on cerebellum time-activity curve. Probably resulting from the presence of specific signal from the vessel walls that contains in normal condition a significant concentration of the 18&thinsp;kDa translocation protein. Best contrast between subject groups was seen using SVCA4-based reference tissues as the result of a lower number of kinetic classes and the prior removal of extracerebral tissues. In addition, incorporation of V(b) in RPM improved both parametric images and binding potential contrast between groups. Incorporation of V(b) within RPM, together with SVCA4, appears to be the method of choice for analyzing cerebral (R)-[(11)C]PK11195 neurodegeneration studies.</p>", 
    "license": {
      "id": "CC-BY-4.0"
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    "title": "Optimization of supervised cluster analysis for extracting reference tissue input curves in (R)-[(11)C]PK11195 brain PET studies.", 
    "journal": {
      "volume": "32", 
      "year": "2012", 
      "issue": "8", 
      "pages": "1600-8", 
      "title": "Journal of Cerebral Blood Flow & Metabolism "
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    "keywords": [
      "clustering", 
      "parametric analysis", 
      "(R)-[11C]PK11195", 
      "reference tissue"
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    "publication_date": "2012-05-16", 
    "creators": [
      {
        "affiliation": "Department of Nuclear Medicine and PET Research, VU University Medical Center, Amsterdam, The Netherlands;", 
        "name": "Yaqub, Maqsood"
      }, 
      {
        "affiliation": "Department of Nuclear Medicine and PET Research, VU University Medical Center, Amsterdam, The Netherlands;", 
        "name": "van Berckel, Bart NM"
      }, 
      {
        "affiliation": "Department of Neurology and Alzheimer Center, VU University Medical Center, Amsterdam, The Netherlands", 
        "name": "Schuitemakers, Alie"
      }, 
      {
        "affiliation": "Wolfson Molecular Imaging Centre, University of Manchester, Manchester, UK", 
        "name": "Hinz, Rainer"
      }, 
      {
        "affiliation": "Division of Experimental Medicine, Imperial College London, London, UK", 
        "name": "Turkheimer, Federico E"
      }, 
      {
        "affiliation": "Department of Diagnostic Radiology, Yale University, New Haven, Connecticut, USA", 
        "name": "Tomasi, Giampaolo"
      }, 
      {
        "affiliation": "Department of Nuclear Medicine and PET Research, VU University Medical Center, Amsterdam, The Netherlands;", 
        "name": "Lammertsma, Adriaan A"
      }, 
      {
        "affiliation": "Department of Nuclear Medicine and PET Research, VU University Medical Center, Amsterdam, The Netherlands;", 
        "name": "Boellaard, Ronald"
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