Journal article Open Access
Sample paired-end RNA-seq data from four human macophage samples (chromsome 21 only)
Kaur Alasoo
This is a small subset of the RNA-seq data from a recently published macrophage study (https://doi.org/10.1038/s41588-018-0046-7) intended for quickly testing alignment and quantification methods. The fastq files only contain reads mapping to the chromosome 21 of the human genome.
The dataset consists of macrophages from two individuals (eipl and fikt) profiled in two conditions:
- A - naive
- C - 5 hours after Salmonella infection
The data is paired end with 1 and 2 denoting the first and second pair, respectively.
Files
(271.2 MB)
| Name | Size | |
|---|---|---|
|
eipl_A.1.fastq.gz
md5:d9db52f6da5ae681846e1161cf61732b |
20.5 MB | Download |
|
eipl_A.2.fastq.gz
md5:1dd392dde3dba47c34750d7760415e82 |
21.3 MB | Download |
|
eipl_C.1.fastq.gz
md5:a8138ed9489c65bd70d8ad0ee2aa0343 |
30.1 MB | Download |
|
eipl_C.2.fastq.gz
md5:2cdbcb09b1f395c0397ce5bd6f2e2c69 |
31.3 MB | Download |
|
fikt_A.1.fastq.gz
md5:659d77ea828e93f44939fd8e0f52f4cc |
25.6 MB | Download |
|
fikt_A.2.fastq.gz
md5:ee76288ad4d03d5fcb2ce0ed114ed34f |
27.4 MB | Download |
|
fikt_C.1.fastq.gz
md5:36bffc47f830a5f1e7942396fd6dc7d4 |
26.9 MB | Download |
|
fikt_C.2.fastq.gz
md5:9c14f31a97da19bd876c955e5e3fc7e9 |
28.3 MB | Download |
|
Homo_sapiens.GRCh38.91.chr21.gtf
md5:0c62f1472e48aca5fb9e0d03f88534f4 |
12.3 MB | Download |
|
Homo_sapiens.GRCh38.dna.chromosome.21.fa
md5:e5949317dd94da24eee7c3b9586460d1 |
47.5 MB | Download |
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| Unique downloads | 580 | 34 |
Indexed in
- Publication date:
- February 13, 2023
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International