Published January 18, 2023
| Version 0.2.0
Software
Open
sv-channels
- 1. University Medical Center Utrecht
- 2. Netherlands eScience Center
Contributors
Researchers:
- 1. Netherlands eScience Center
- 2. University Medical Center Utrecht
Description
sv-channels is a Deep Learning workflow for filtering structural variants (SVs) in short read alignment data using a one-dimensional Convolutional Neural Network (CNN). Currently, only deletions (DEL) called with Manta are supported.
Files
sv-channels-v0.2.0.zip
Files
(89.7 MB)
| Name | Size | Download all |
|---|---|---|
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md5:e7f16f36043349a0bce81c8d78bcefbf
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89.7 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/GooglingTheCancerGenome/sv-channels/tree/v0.2.0 (URL)
- Is supplemented by
- Poster: 10.5281/zenodo.1254880 (DOI)