Melissa Sulprizio
2022-10-26
<p>Release date: 25 Oct 2022</p>
<p>This is a major version release featuring the following updates:</p>
<ul>
<li>Converted input.geos to geoschem_config.yml</li>
<li>Fixed bugs causing differences when splitting up simulations in time</li>
<li>Remove unnecessary met-fields from GCClassic restart file</li>
<li>Updated offline emissions</li>
<li>Rebuilt mechanisms with KPP 2.5.0</li>
<li>Changed 4D State_Chm%Species array to vector of 3D arrays</li>
<li>Boundary conditions are now saved on first timestep</li>
<li>Updated HEMCO to version 3.5.0</li>
<li>Updated GMAO libraries for GCHP</li>
<li>Added option to use native GEOS-FP winds for GCHP</li>
<li>Fixed bug in GCHP vertical mass flux diagnostic</li>
<li>Fix compilation errors for custom mechanism</li>
<li>Bug fixes for the Hg simulation</li>
<li>Updates for GEOS from GMAO</li>
<li>Updates for GEOS-Chem and HEMCO in CESM</li>
<li>Updates for GEOS-Chem in WRF-GC</li>
<li>Use newest CEDS data in CO2 simulation</li>
<li>Fix typo in HEMCO_Config.rc for GCHP</li>
<li>Bug fix in rundir creation for GCAP2</li>
<li>GEOS-Chem user registration</li>
</ul>
<p>See the <a href="http://wiki.seas.harvard.edu/geos-chem/index.php/GEOS-Chem_14.0.0">GEOS-Chem 14.0.0</a> page for a complete list of updates.</p>
What's Changed
<ul>
<li>Bug fix for GCHP run directories using GEOS-FP meteorology by @LiamBindle in <a href="https://github.com/geoschem/geos-chem/pull/1224">https://github.com/geoschem/geos-chem/pull/1224</a></li>
<li>Change 4D State_Chm%Species array to vector of 3D concentration arrays by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/990">https://github.com/geoschem/geos-chem/pull/990</a></li>
<li>Convert input.geos to YAML format; save rundir_vars.txt in the runConfig subdirectory - Closes #1111 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1128">https://github.com/geoschem/geos-chem/pull/1128</a></li>
<li>GCHP restart updates for compatibility with newer MAPL by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1106">https://github.com/geoschem/geos-chem/pull/1106</a></li>
<li>Bug fixes to remove GCHP diffs if splitting up simulations in time by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1229">https://github.com/geoschem/geos-chem/pull/1229</a></li>
<li>Remove TMPU1, SPHU1, PS1_WET, and PS1_DRY from GC-Classic restart file by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1250">https://github.com/geoschem/geos-chem/pull/1250</a></li>
<li>Rebuild fullchem and Hg mechanisms with KPP 2.5.0 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1258">https://github.com/geoschem/geos-chem/pull/1258</a></li>
<li>Avoid div-by-zero in routine MMR_Compute_Flux -- Closes #1215 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1216">https://github.com/geoschem/geos-chem/pull/1216</a></li>
<li>Fix HEMCO diagnostic counter zero warnings in full chemistry simulation by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1260">https://github.com/geoschem/geos-chem/pull/1260</a></li>
<li>Reduce root logging level for MAPL to WARNING by @sdeastham in <a href="https://github.com/geoschem/geos-chem/pull/1262">https://github.com/geoschem/geos-chem/pull/1262</a></li>
<li>Added native versions of GEOS-FP as menu options in GCHP run directory creation by @LiamBindle in <a href="https://github.com/geoschem/geos-chem/pull/1230">https://github.com/geoschem/geos-chem/pull/1230</a></li>
<li>Bug fixes for building and running GEOS-Chem 14.0 in GEOS by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1270">https://github.com/geoschem/geos-chem/pull/1270</a></li>
<li>GCHP run directory changes to easily segment runs in time by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1259">https://github.com/geoschem/geos-chem/pull/1259</a></li>
<li>Bug fix for GCHP transport tracers simulation in 14.0.0-rc.0 by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1271">https://github.com/geoschem/geos-chem/pull/1271</a></li>
<li>GEOS-Chem updates for GEOS from GMAO by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1272">https://github.com/geoschem/geos-chem/pull/1272</a></li>
<li>Update offline biogenic VOC and soil NOx emissions by @msulprizio in <a href="https://github.com/geoschem/geos-chem/pull/1281">https://github.com/geoschem/geos-chem/pull/1281</a></li>
<li>Change GCHP restart filename convention to exclude seconds by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1302">https://github.com/geoschem/geos-chem/pull/1302</a></li>
<li>Remove seconds from gchp log filename to match time in new restart filename by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1303">https://github.com/geoschem/geos-chem/pull/1303</a></li>
<li>Updated the KPP/custom mechanism files so that it builds out-of-the-box -- Closes #1332 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1333">https://github.com/geoschem/geos-chem/pull/1333</a></li>
<li>Bug fixes for the Hg simulation with KPP by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1336">https://github.com/geoschem/geos-chem/pull/1336</a></li>
<li>Fix bug in setCommonRunSettings.sh that cause "RECORD_REF_DATE: cap_restart" and "RECORD_REF_TIME: cap_restart" by @LiamBindle in <a href="https://github.com/geoschem/geos-chem/pull/1343">https://github.com/geoschem/geos-chem/pull/1343</a></li>
<li>Update HEMCO_Config.rc for compatibility with GC 13.4.x and 14.0.0 in CESM by @jimmielin in <a href="https://github.com/geoschem/geos-chem/pull/1344">https://github.com/geoschem/geos-chem/pull/1344</a></li>
<li>Bug fixes for Prod/Loss diagnostics for Hg simulation -- Closes #1284, #1285 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1356">https://github.com/geoschem/geos-chem/pull/1356</a></li>
<li>Updates for CESM in GEOS-Chem by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1164">https://github.com/geoschem/geos-chem/pull/1164</a></li>
<li>Updates for GEOS from GMAO by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1328">https://github.com/geoschem/geos-chem/pull/1328</a></li>
<li>Add per-domain FIRST switch in ExtState_SetFields for WRF-GC by @jimmielin in <a href="https://github.com/geoschem/geos-chem/pull/1354">https://github.com/geoschem/geos-chem/pull/1354</a></li>
<li>Feature/user registration: optionally register first time users with dynamodb database by @laestrada in <a href="https://github.com/geoschem/geos-chem/pull/1279">https://github.com/geoschem/geos-chem/pull/1279</a></li>
<li>Revert GCClassic_Output/14.0.0 data to GCClassic_Output/13.0.0 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1385">https://github.com/geoschem/geos-chem/pull/1385</a></li>
<li>Add special treatment for MOH in dry deposition if not over land by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1389">https://github.com/geoschem/geos-chem/pull/1389</a></li>
<li>Bug fix: revert GC-Classic pressure fixer to v13.3 by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1387">https://github.com/geoschem/geos-chem/pull/1387</a></li>
<li>Add missing entries for POG1, POG2, and pFe to HEMCO_Config.rc by @msulprizio in <a href="https://github.com/geoschem/geos-chem/pull/1299">https://github.com/geoschem/geos-chem/pull/1299</a></li>
<li>Specify AOD wavelength 999 nm for use in FAST-JX by @lizziel in <a href="https://github.com/geoschem/geos-chem/pull/1319">https://github.com/geoschem/geos-chem/pull/1319</a></li>
<li>Update registration to allow for user to input computational environment by @msulprizio in <a href="https://github.com/geoschem/geos-chem/pull/1408">https://github.com/geoschem/geos-chem/pull/1408</a></li>
<li>Update the README file that gets placed in the rundir for 14.0.0 by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1433">https://github.com/geoschem/geos-chem/pull/1433</a></li>
<li>Bug fix: disable analytical inversion by default for CH4 simulations by @yantosca in <a href="https://github.com/geoschem/geos-chem/pull/1437">https://github.com/geoschem/geos-chem/pull/1437</a></li>
<li>Add CHANGELOG.md by @msulprizio in <a href="https://github.com/geoschem/geos-chem/pull/1446">https://github.com/geoschem/geos-chem/pull/1446</a></li>
<li>Update createdRunDir.sh for 14.0.0 release by @msulprizio in <a href="https://github.com/geoschem/geos-chem/pull/1461">https://github.com/geoschem/geos-chem/pull/1461</a></li>
</ul>
<p><strong>Full Changelog</strong>: <a href="https://github.com/geoschem/geos-chem/compare/13.4.1...14.0.0">https://github.com/geoschem/geos-chem/compare/13.4.1...14.0.0</a></p>
https://doi.org/10.5281/zenodo.7254288
oai:zenodo.org:7254288
Zenodo
https://github.com/geoschem/geos-chem/tree/14.0.0
https://doi.org/10.5281/zenodo.1343546
info:eu-repo/semantics/openAccess
Other (Open)
geoschem/geos-chem: GEOS-Chem 14.0.0
info:eu-repo/semantics/other