geoschem/geos-chem: GEOS-Chem 14.0.0

Release date: 25 Oct 2022

This is a major version release featuring the following updates:

• Converted input.geos to geoschem_config.yml
• Fixed bugs causing differences when splitting up simulations in time
• Remove unnecessary met-fields from GCClassic restart file
• Updated offline emissions
• Rebuilt mechanisms with KPP 2.5.0
• Changed 4D State_Chm%Species array to vector of 3D arrays
• Boundary conditions are now saved on first timestep
• Updated HEMCO to version 3.5.0
• Updated GMAO libraries for GCHP
• Added option to use native GEOS-FP winds for GCHP
• Fixed bug in GCHP vertical mass flux diagnostic
• Fix compilation errors for custom mechanism
• Bug fixes for the Hg simulation
• Updates for GEOS from GMAO
• Updates for GEOS-Chem and HEMCO in CESM
• Updates for GEOS-Chem in WRF-GC
• Use newest CEDS data in CO2 simulation
• Fix typo in HEMCO_Config.rc for GCHP
• Bug fix in rundir creation for GCAP2
• GEOS-Chem user registration

See the GEOS-Chem 14.0.0 page for a complete list of updates.

• Bug fix for GCHP run directories using GEOS-FP meteorology by @LiamBindle in https://github.com/geoschem/geos-chem/pull/1224
• Change 4D State_Chm%Species array to vector of 3D concentration arrays by @lizziel in https://github.com/geoschem/geos-chem/pull/990
• Convert input.geos to YAML format; save rundir_vars.txt in the runConfig subdirectory - Closes #1111 by @yantosca in https://github.com/geoschem/geos-chem/pull/1128
• GCHP restart updates for compatibility with newer MAPL by @yantosca in https://github.com/geoschem/geos-chem/pull/1106
• Bug fixes to remove GCHP diffs if splitting up simulations in time by @lizziel in https://github.com/geoschem/geos-chem/pull/1229
• Remove TMPU1, SPHU1, PS1_WET, and PS1_DRY from GC-Classic restart file by @lizziel in https://github.com/geoschem/geos-chem/pull/1250
• Rebuild fullchem and Hg mechanisms with KPP 2.5.0 by @yantosca in https://github.com/geoschem/geos-chem/pull/1258
• Avoid div-by-zero in routine MMR_Compute_Flux -- Closes #1215 by @yantosca in https://github.com/geoschem/geos-chem/pull/1216
• Fix HEMCO diagnostic counter zero warnings in full chemistry simulation by @lizziel in https://github.com/geoschem/geos-chem/pull/1260
• Reduce root logging level for MAPL to WARNING by @sdeastham in https://github.com/geoschem/geos-chem/pull/1262
• Added native versions of GEOS-FP as menu options in GCHP run directory creation by @LiamBindle in https://github.com/geoschem/geos-chem/pull/1230
• Bug fixes for building and running GEOS-Chem 14.0 in GEOS by @lizziel in https://github.com/geoschem/geos-chem/pull/1270
• GCHP run directory changes to easily segment runs in time by @lizziel in https://github.com/geoschem/geos-chem/pull/1259
• Bug fix for GCHP transport tracers simulation in 14.0.0-rc.0 by @lizziel in https://github.com/geoschem/geos-chem/pull/1271
• GEOS-Chem updates for GEOS from GMAO by @lizziel in https://github.com/geoschem/geos-chem/pull/1272
• Update offline biogenic VOC and soil NOx emissions by @msulprizio in https://github.com/geoschem/geos-chem/pull/1281
• Change GCHP restart filename convention to exclude seconds by @lizziel in https://github.com/geoschem/geos-chem/pull/1302
• Remove seconds from gchp log filename to match time in new restart filename by @lizziel in https://github.com/geoschem/geos-chem/pull/1303
• Updated the KPP/custom mechanism files so that it builds out-of-the-box -- Closes #1332 by @yantosca in https://github.com/geoschem/geos-chem/pull/1333
• Bug fixes for the Hg simulation with KPP by @yantosca in https://github.com/geoschem/geos-chem/pull/1336
• Fix bug in setCommonRunSettings.sh that cause "RECORD_REF_DATE: cap_restart" and "RECORD_REF_TIME: cap_restart" by @LiamBindle in https://github.com/geoschem/geos-chem/pull/1343
• Update HEMCO_Config.rc for compatibility with GC 13.4.x and 14.0.0 in CESM by @jimmielin in https://github.com/geoschem/geos-chem/pull/1344
• Bug fixes for Prod/Loss diagnostics for Hg simulation -- Closes #1284, #1285 by @yantosca in https://github.com/geoschem/geos-chem/pull/1356
• Updates for CESM in GEOS-Chem by @lizziel in https://github.com/geoschem/geos-chem/pull/1164
• Updates for GEOS from GMAO by @lizziel in https://github.com/geoschem/geos-chem/pull/1328
• Add per-domain FIRST switch in ExtState_SetFields for WRF-GC by @jimmielin in https://github.com/geoschem/geos-chem/pull/1354
• Feature/user registration: optionally register first time users with dynamodb database by @laestrada in https://github.com/geoschem/geos-chem/pull/1279
• Revert GCClassic_Output/14.0.0 data to GCClassic_Output/13.0.0 by @yantosca in https://github.com/geoschem/geos-chem/pull/1385
• Add special treatment for MOH in dry deposition if not over land by @lizziel in https://github.com/geoschem/geos-chem/pull/1389
• Bug fix: revert GC-Classic pressure fixer to v13.3 by @lizziel in https://github.com/geoschem/geos-chem/pull/1387
• Add missing entries for POG1, POG2, and pFe to HEMCO_Config.rc by @msulprizio in https://github.com/geoschem/geos-chem/pull/1299
• Specify AOD wavelength 999 nm for use in FAST-JX by @lizziel in https://github.com/geoschem/geos-chem/pull/1319
• Update registration to allow for user to input computational environment by @msulprizio in https://github.com/geoschem/geos-chem/pull/1408
• Update the README file that gets placed in the rundir for 14.0.0 by @yantosca in https://github.com/geoschem/geos-chem/pull/1433
• Bug fix: disable analytical inversion by default for CH4 simulations by @yantosca in https://github.com/geoschem/geos-chem/pull/1437
• Add CHANGELOG.md by @msulprizio in https://github.com/geoschem/geos-chem/pull/1446
• Update createdRunDir.sh for 14.0.0 release by @msulprizio in https://github.com/geoschem/geos-chem/pull/1461

Full Changelog: https://github.com/geoschem/geos-chem/compare/13.4.1...14.0.0