Software Open Access
Tourbier, Sebastien; Rue Queralt, Joan; Glomb, Katharina; Aleman-Gomez, Yasser; Mullier, Emeline; Griffa, Alessandra; Schöttner, Mikkel; Wirsich, Jonathan; Tuncel, Anil; Jancovic, Jakub; Bach Cuadra, Meritxell; Hagmann, Patric
Connectome Mapper 3 implements, in accordance to the BIDS-App standard, full anatomical, diffusion, and resting/state functional MRI processing pipelines, from raw T1, DWI, BOLD, and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices, based on a new version of the Lausanne parcellation atlas (Cammoun et al, 2012), aka Lausanne2018.
This first minor version integrates the new pipeline dedicated to EEG modality and fixes a few bugs. 🤩
The conda environment files (
cmpbidsappmanager have been greatly modified (PR #212).
In all conda environment
requirements.txt files, datalad and its container extension have been updated to version
1.1.6 respectively. (PR #209)
cmpbidsappmanager. (PR #201 and PR #205)
3.2.2as the imported functions of
nibabel.trackvishas been moved since
4.0.0and caused errors. (PR #211)
Software development life cycle
Please check the main PR #149 page for more details.