immunomind/immunarch: Immunarch 0.8.0
Creators
- 1. Immunomind
- 2. ImmunoMind
Description
BCR pipeline now requires less columns in the input data: only nucleotide sequences of FR1-4 and CDR1-3 regions are needed Bugfixes and performance improvements in BCR pipeline Removed arguments .align_j_gene from repGermline() and .verbose_output from repAlignLineage() that are not needed anymore seqDist() and seqCluster() now support auto-trimming of extra information from gene columns for proper cluster naming New .trim_genes argument for seqDist() that allows to disable auto-trimming (useful if used columns are not ones with genes) Improved clustering in seqCluster() Removed some false warning that appeared on vis() calls
Files
immunomind/immunarch-0.8.0.zip
Files
(101.2 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/immunomind/immunarch/tree/0.8.0 (URL)