Dataset Open Access
Non-genetically-based intraspecific differentiation for heavy metal tolerance in the copper moss Scopelophila cataractae
Boquete MT; Schmid MW; Wagemaker NCAM; Carey SB; McDaniel SF; Richards CL; Alonso C
We used next-generation sequencing to study DNA methylation and gene expression changes in plants from four clonal populations of the metallophyte moss Scopelophila cataractae experimentally exposed to either Cd or Cu. For this we performed reduced representation bisulfite DNA sequencing and RNA sequencing.
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| Name | Size | |
|---|---|---|
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de_novo_contigs.fasta.gz
md5:380fc1d5b844f10caedfd10d6326bd2e |
16.4 MB | Download |
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de_novo_transcriptome.fasta.gz
md5:268537448020c99447b1ef059b7113b9 |
60.7 MB | Download |
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de_novo_transcriptome_annotation_blast&IPS.txt
md5:a10a7595c09bedadc6bacd75bfa61c5f |
20.8 MB | Download |
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mergedAnnot.csv
md5:013426d8589921b60e3c79c6a515add0 |
16.8 MB | Download |
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methylation.txt.gz
md5:bbfa48084c89c9755f01bed41cf383da |
227.6 MB | Download |
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snp.vcf.gz
md5:ee58abf1098aad35509be55d1404e1ef |
38.2 MB | Download |
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SupplementaryMaterials_Boquete_et_al_DiB.tar.gz
md5:464a4be47a1baf9bfc5c3d4e7900ba04 |
591.9 kB | Download |
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Indexed in
- Publication date:
- December 13, 2021
- DOI:
-
- Keyword(s):
- DNA methylation gene expression heavy metal tolerance bryophytes moss RNA sequencing
- Grants:
-
European Commission:
- BRYOMICS - Application of high-sensitive and high-throughput molecular tools to disentangle the mechanisms of heavy metals accumulation and tolerance in mosses: epigenetic and transcriptomic approaches (704141)
- License (for files):
- Creative Commons Attribution 4.0 International