June 6, 2022 Dataset Open Access

Yinxiu Zhan

DataCite XML Export

<?xml version='1.0' encoding='utf-8'?>
<resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4.1/metadata.xsd">
  <identifier identifierType="DOI">10.5281/zenodo.6627715</identifier>
  <creators>
    <creator>
      <creatorName>Yinxiu Zhan</creatorName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0001-7702-6207</nameIdentifier>
      <affiliation>Istituto Europeo di Oncologia</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Cohesin and CTCF control the dynamics of chromosome folding</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2022</publicationYear>
  <subjects>
    <subject>chromosome dynamics</subject>
    <subject>single particle tracking</subject>
    <subject>ctcf</subject>
    <subject>cohesin</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2022-06-06</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Dataset"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/6627715</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.6627714</relatedIdentifier>
  </relatedIdentifiers>
  <version>0</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;The dataset contains all the tracking data from Mach et al 2022 paper.&lt;/p&gt;

&lt;p&gt;Each file has the following header:&lt;/p&gt;

&lt;p&gt;x,y,z: spot coordinate. For dual color imaging, the distance along x,y and z across channels&lt;/p&gt;

&lt;p&gt;track: track id&lt;/p&gt;

&lt;p&gt;frame: time frame&lt;/p&gt;

&lt;p&gt;cell: cell id&lt;/p&gt;</description>
  </descriptions>
  <fundingReferences>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/100010661</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/813327/">813327</awardNumber>
      <awardTitle>Chromatin architecture and Design</awardTitle>
    </fundingReference>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/100010661</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/813282/">813282</awardNumber>
      <awardTitle>Predictive Epigenetics: Fusing Theory and Experiment</awardTitle>
    </fundingReference>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/100010661</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/748091/">748091</awardNumber>
      <awardTitle>Understanding long-range transcriptional regulation in the context of the 3D genome organization</awardTitle>
    </fundingReference>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/100010661</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/759366/">759366</awardNumber>
      <awardTitle>Biophysical mechanisms of long-range transcriptional regulation</awardTitle>
    </fundingReference>
  </fundingReferences>
</resource>