hpi-dhc/ggponc_annotation-ggponc_v2.0_lrec.zip
hpi-dhc-ggponc_annotation-868b338
.gitignore
2.1 kB
.gitmodules
114 Bytes
LICENSE.txt
35.1 kB
README.md
4.2 kB
annotation_guide
anno_guide.pdf
182.6 kB
conftest.py
0 Bytes
data
.gitignore
73 Bytes
experiments
.gitignore
28 Bytes
01_ggponc_coarse_short.yaml
439 Bytes
02_ggponc_fine_short.yaml
533 Bytes
03_ggponc_coarse_long.yaml
433 Bytes
04_ggponc_fine_long.yaml
524 Bytes
error_analysis.py
8.5 kB
ggponc_base_config.yaml
1.5 kB
huggingface_utils.py
4.9 kB
run_experiment.py
6.7 kB
sweep.sh
264 Bytes
gamma_agreement.py
2.5 kB
inception-analytics
.gitignore
147 Bytes
README.md
1.6 kB
analytics.py
16.8 kB
dashboard.py
5.6 kB
data
Example_Project_POS.zip
182.8 kB
example.py
630 Bytes
img
dashboard.png
277.2 kB
install.sh
266 Bytes
requirements.txt
101 Bytes
run_streamlit.sh
293 Bytes
streamlit_utils.py
2.9 kB
utils.py
5.6 kB
notebooks
01_Statistics.ipynb
54.1 kB
02_NER_Baselines.ipynb
32.7 kB
03_NER_Analysis.ipynb
113.6 kB
04_spaCy_Spancat.ipynb
4.0 kB
stats_util.py
672 Bytes
requirements.txt
202 Bytes
spacy
.gitignore
15 Bytes
configs
spancat.cfg
3.8 kB
project.lock
723 Bytes
project.yml
2.1 kB
run_training.sh
229 Bytes
scripts
evaluate.py
2.1 kB
snomed_spans.py
5.1 kB
test
convert_annotation_test.py
53.6 kB
test_data
01_magenkarzinom_0192.tsv
38.0 kB
03_lungenkarzinom_0010.tsv
29.8 kB
03_lungenkarzinom_0621.tsv
9.8 kB
04_praevention-zervixkarzinom_0211.tsv
37.6 kB
05_zervixkarzinom_0265.tsv
23.8 kB
07_malignes-melanom_0207.tsv
31.0 kB
08_aktinische-keratose-und-plattenepithelkarzinom-der-haut_0075.tsv
28.0 kB
11_hepatozellulaeres-karzinom-und-biliaere-karzinome_0249.tsv
21.8 kB
18_hodgkin-lymphom_0051.tsv
105.1 kB
21_hodentumoren_0260.tsv
66.2 kB
22_prostatakarzinom_0334.tsv
25.5 kB
test_files
test_empty_file.tsv
781 Bytes
test_fragment.tsv
910 Bytes
test_fragment_spacy.tsv
1.3 kB
test_gap.tsv
1.6 kB
test_multi_branches.tsv
4.9 kB
test_multi_spec.tsv
1.2 kB
test_multi_spec_gap.tsv
1.1 kB
test_null.tsv
4.5 kB
test_problem.tsv
1.1 kB
test_simple.tsv
1.2 kB
test_specification_fragment.tsv
1.8 kB
test_unclosable_gap.tsv
1.6 kB
util
ConvertSpacy.ipynb
275.5 kB
convert_annotations.py
23.4 kB
temp.spacy
23.3 kB