March 14, 2022 Journal article Open Access

Jones, Matthew G; Rosen, Yanay; Yosef, Nir

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  <identifier identifierType="DOI">10.5281/zenodo.6354747</identifier>
  <creators>
    <creator>
      <creatorName>Jones, Matthew G</creatorName>
      <givenName>Matthew G</givenName>
      <familyName>Jones</familyName>
      <affiliation>UCSF / UC Berkeley / MIT</affiliation>
    </creator>
    <creator>
      <creatorName>Rosen, Yanay</creatorName>
      <givenName>Yanay</givenName>
      <familyName>Rosen</familyName>
      <affiliation>Stanford</affiliation>
    </creator>
    <creator>
      <creatorName>Yosef, Nir</creatorName>
      <givenName>Nir</givenName>
      <familyName>Yosef</familyName>
      <affiliation>UC Berkeley</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Example PhyloVision reports for "PhyloVision: Interactive Software for Integrated Analysis of Single-Cell Transcriptomic and Phylogenetic Data"</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2022</publicationYear>
  <dates>
    <date dateType="Issued">2022-03-14</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="JournalArticle"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/6354747</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.5281/zenodo.6354746</relatedIdentifier>
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  <version>1.0.0</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This repository contains the PhyloVision reports used in the study:&lt;/p&gt;

&lt;p&gt;Jones, Rosen et al.&amp;nbsp;&lt;em&gt;PhyloVision&lt;/em&gt;: Interactive Software for Integrated Analysis of Single-Cell Transcriptomic and Phylogenetic Data.&amp;nbsp;&amp;nbsp;&lt;em&gt;bioRxiv&lt;/em&gt;&amp;nbsp;2021&lt;/p&gt;

&lt;p&gt;To use this data, we recommend that users first install VISION using the instructions &lt;a href="https://yoseflab.github.io/VISION/"&gt;here&lt;/a&gt;&amp;nbsp;and download this repository. Then, reports can be read in and launched.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;Vignettes for producing similar reports to those provided here can be found with the rest of the software vignettes on the documentation website:&amp;nbsp;https://yoseflab.github.io/VISION/&lt;/p&gt;</description>
  </descriptions>
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