Ali Khan
jordandekraker
2022-01-19
Changes
🚀 Features
<ul>
<li>workflow updates to allow T2w without T1w @akhanf (#153)</li>
<li>Unfold DG @jordandekraker (#146)</li>
<li>single modality at a time @akhanf (#137)</li>
<li>Neonate T1w workflow updates @akhanf (#124)</li>
<li>added refvol to results for easier unfolded transforms @jordandekraker (#144)</li>
<li>adds rules for composite warps from unfold and remove map to full grid @akhanf (#143)</li>
<li>Cosine_rep to generate smooth, simple nativespace surfaces @jordandekraker (#117)</li>
<li>updated hippb500 model @akhanf (#118)</li>
<li>adds coords on surfaces, \& pre-smoothing for curv @akhanf (#110)</li>
<li>Cropseg patch @akhanf (#105)</li>
<li>Switch IO laplace (isopotential) coordinates to isovolume @jordandekraker (#96)</li>
<li>add flag --no_reg_template for inputs that are already in space-CITI168 @jordandekraker (#99)</li>
<li>new gyrification as surface area ratio @akhanf (#93)</li>
</ul>
🐛 Bug Fixes
<ul>
<li>allowing qc to use corobl @jordandekraker (#159)</li>
<li>quick patch to prevent source config file from being modified @akhanf (#157)</li>
<li>patch for skip_templateshape @jordandekraker (#152)</li>
<li>minor fix to template shape injection @akhanf (#119)</li>
<li>qc fixes @akhanf (#120)</li>
<li>temporarily disable the vis regqc rule @akhanf (#114)</li>
<li>added missing group directive @akhanf (#112)</li>
<li>minor correction to subfield label names @jordandekraker (#108)</li>
<li>fix typo in help usage @akhanf (#103)</li>
<li>bugfix: pin version of batchgenerators @akhanf (#100)</li>
<li>No more overlapping points in griddata interpolation in create_warps.py @jordandekraker (#95)</li>
</ul>
🧰 Maintenance
<ul>
<li>added logging @akhanf (#160)</li>
<li>output refactoring, removed datatype=seg folders, added coords, warps @akhanf (#155)</li>
<li>add generate dags github workflow @akhanf (#149)</li>
<li>Auto-formatting and quality-checks @akhanf (#148)</li>
<li>root dir change for snakebids 0.4.0 @akhanf (#145)</li>
<li>Update release-drafter.yml @akhanf (#147)</li>
<li>Update deps @akhanf (#140)</li>
<li>removes deprecated and unused files @akhanf (#138)</li>
<li>Add download model console script to pyproject @akhanf (#136)</li>
<li>add requirements.txt from poetry export @akhanf (#135)</li>
<li>remove old deploy github actions @akhanf (#134)</li>
<li>replaces setup.py with pyproject.toml and poetry @akhanf (#131)</li>
<li>Create manual_release_drafter.yml @akhanf (#133)</li>
<li>adds bump_version and release drafter @akhanf (#132)</li>
<li>pin docutils\<0.18 @akhanf (#115)</li>
<li>update autotop v0.4.1, remove deprecated mcr cfg @akhanf (#109)</li>
</ul>
📝 Documentation
<ul>
<li>simple version for non-contributors @jordandekraker (#151)</li>
<li>Docs from RST to Markdown @akhanf (#150)</li>
<li>clarification and details for documentation @jordandekraker (#106)</li>
<li>Tutorials \& examples @jordandekraker (#97)</li>
</ul>
https://doi.org/10.5281/zenodo.6092142
oai:zenodo.org:6092142
Zenodo
https://github.com/khanlab/hippunfold/tree/v1.0.0
https://doi.org/10.5281/zenodo.4717972
info:eu-repo/semantics/openAccess
Other (Open)
khanlab/hippunfold: 1.0.0
info:eu-repo/semantics/other