Software Open Access

khanlab/hippunfold: 1.0.0

Ali Khan; jordandekraker

Changes 🚀 Features
  • workflow updates to allow T2w without T1w @akhanf (#153)
  • Unfold DG @jordandekraker (#146)
  • single modality at a time @akhanf (#137)
  • Neonate T1w workflow updates @akhanf (#124)
  • added refvol to results for easier unfolded transforms @jordandekraker (#144)
  • adds rules for composite warps from unfold and remove map to full grid @akhanf (#143)
  • Cosine_rep to generate smooth, simple nativespace surfaces @jordandekraker (#117)
  • updated hippb500 model @akhanf (#118)
  • adds coords on surfaces, \& pre-smoothing for curv @akhanf (#110)
  • Cropseg patch @akhanf (#105)
  • Switch IO laplace (isopotential) coordinates to isovolume @jordandekraker (#96)
  • add flag --no_reg_template for inputs that are already in space-CITI168 @jordandekraker (#99)
  • new gyrification as surface area ratio @akhanf (#93)
🐛 Bug Fixes
  • allowing qc to use corobl @jordandekraker (#159)
  • quick patch to prevent source config file from being modified @akhanf (#157)
  • patch for skip_templateshape @jordandekraker (#152)
  • minor fix to template shape injection @akhanf (#119)
  • qc fixes @akhanf (#120)
  • temporarily disable the vis regqc rule @akhanf (#114)
  • added missing group directive @akhanf (#112)
  • minor correction to subfield label names @jordandekraker (#108)
  • fix typo in help usage @akhanf (#103)
  • bugfix: pin version of batchgenerators @akhanf (#100)
  • No more overlapping points in griddata interpolation in create_warps.py @jordandekraker (#95)
🧰 Maintenance
  • added logging @akhanf (#160)
  • output refactoring, removed datatype=seg folders, added coords, warps @akhanf (#155)
  • add generate dags github workflow @akhanf (#149)
  • Auto-formatting and quality-checks @akhanf (#148)
  • root dir change for snakebids 0.4.0 @akhanf (#145)
  • Update release-drafter.yml @akhanf (#147)
  • Update deps @akhanf (#140)
  • removes deprecated and unused files @akhanf (#138)
  • Add download model console script to pyproject @akhanf (#136)
  • add requirements.txt from poetry export @akhanf (#135)
  • remove old deploy github actions @akhanf (#134)
  • replaces setup.py with pyproject.toml and poetry @akhanf (#131)
  • Create manual_release_drafter.yml @akhanf (#133)
  • adds bump_version and release drafter @akhanf (#132)
  • pin docutils\<0.18 @akhanf (#115)
  • update autotop v0.4.1, remove deprecated mcr cfg @akhanf (#109)
📝 Documentation
  • simple version for non-contributors @jordandekraker (#151)
  • Docs from RST to Markdown @akhanf (#150)
  • clarification and details for documentation @jordandekraker (#106)
  • Tutorials \& examples @jordandekraker (#97)
Files (170.8 MB)
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khanlab/hippunfold-v1.0.0.zip
md5:c0486f01649f2bb4d3de2e24042c72d5
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