Software Open Access

SPEctRA: A Scalable Pipeline for RNA‬‬‬-seq Ana‬‬lysis

Purushothaman, Immanuel; Shen, Li


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">rna-seq</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">next-generation sequencing</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">python</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">pipeline</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">bioinformatics</subfield>
  </datafield>
  <controlfield tag="005">20200125072418.0</controlfield>
  <controlfield tag="001">60547</controlfield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="u">Icahn School of Medicine at Mount Sinai</subfield>
    <subfield code="a">Shen, Li</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">11180</subfield>
    <subfield code="z">md5:0796934d4ef184f509a6bf55fbcf8a58</subfield>
    <subfield code="u">https://zenodo.org/record/60547/files/SPEctRA-v1.0.zip</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2016-08-19</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="p">software</subfield>
    <subfield code="p">user-bioinformatics</subfield>
    <subfield code="o">oai:zenodo.org:60547</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="4">
    <subfield code="y">2016</subfield>
    <subfield code="p">Github repository</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="u">Icahn School of Medicine at Mount Sinai</subfield>
    <subfield code="a">Purushothaman, Immanuel</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">SPEctRA: A Scalable Pipeline for RNA‬‬‬-seq Ana‬‬lysis</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-bioinformatics</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="u">https://opensource.org/licenses/GPL-3.0</subfield>
    <subfield code="a">GNU General Public License v3.0 only</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;A Scalable Pipeline for RNA‬‬‬-seq Ana‬‬lysis&lt;/p&gt;</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">url</subfield>
    <subfield code="i">isSupplementTo</subfield>
    <subfield code="a">https://github.com/shenlab-sinai/SPEctRA</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.5281/zenodo.60547</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">software</subfield>
  </datafield>
</record>
290
7
views
downloads
All versions This version
Views 290290
Downloads 77
Data volume 78.3 kB78.3 kB
Unique views 266266
Unique downloads 77

Share

Cite as