Dataset Open Access
Ahvenainen, Patrik; Dixon, Patrick G.; Kallonen, Aki; Suhonen, Heikki; Gibson, Lorna J.; Svedström, Kirsi
Spatially-localized X-ray scattering and X-ray microtomography measurements on Moso bamboo
This data set is originally used in:
Ahvenainen, P., Dixon, P. G., Kallonen, A., Suhonen, H., Gibson, L. J., & Svedström, K. (2017). Spatially-localized bench-top X-ray scattering reveals tissue-specific microfibril orientation in Moso bamboo. Plant Methods. 13:5 DOI: 10.1186/s13007-016-0155-1
This data set includes measurements on Moso bamboo (Phyllostachys edulis) performed with two separate set-ups at the Department of Physics, University of Helsinki as described in the above open-access publication. The X-ray microtomography (XMT) measurements, X-ray diffraction tomography (XDT) and localized X-ray scattering (LXS) are done with set-up 1. In LXS, the region-of-interest is selected from a tomographic reconstruction slice based on the XMT measurement using a small X-ray beam (diameter: 200 µm). Additional wide-angle X-ray scattering (WAXS) measurements are conducted with set-up 2 using a larger X-ray beam (diameter approx. 1 mm).
The two-dimensional scattering patterns (Pilatus 1M hybrid pixel array detector) and tomographic reconstruction slices obtained with set-up 2 are stored as TIFF-images (.tif). The two-dimensional scattering patterns (MAR345 image plate detector) obtained with set-up 2 are stored as 32-bit RAW files (unsigned integers, 2300 columns, 2300 rows).
The novel combined WAXS/XMT set up (set-up 1) is first presented in: Suuronen, J.-P., Kallonen, A., Hänninen, V., Blomberg, M., Hämäläinen, K., & Serimaa, R. (2014). Bench-top X-ray microtomography complemented with spatially localized X-ray scattering experiments. Journal of Applied Crystallography, 47(1), 471–475. doi:10.1107/S1600576713031105
Any queries related to the data set or the related Plant Methods article may be directed to the first author by email:
Patrik Ahvenainen, PhD; firstname.lastname@example.org
|XMT - 200 slices.zip
|XMT - single slices.zip