Preprint Open Access
Mashinchian, Omid; Hong, Xiaotong; Michaud, Joris; Migliavacca, Eugenia; Lefebvre, Gregory; Boss, Christophe; De Franceschi, Filippo; Le Moal, Emmeran; Collerette-Tremblay, Jasmin; Isern, Joan; Metairon, Sylviane; Raymond, Frederic; Descombes, Patrick; Bouche, Nicolas; Muñoz-Cánoves, Pura; Feige, Jerome N.; Bentzinger, C. Florian
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However, due to the intrinsic complexity of tissues it remains challenging to pinpoint niche-independent effects of circulating factors on specific cell populations. Here we describe a method for the encapsulation of human and mouse skeletal muscle progenitors in diffusible polyethersulfone hollow fiber capsules that can be used to profile systemic aging in vivo independent of heterogeneous short-range tissue interactions. We observed that circulating long-range signaling factors in the old systemic environment lead to an activation of Myc and E2F transcription factors, induce senescence and suppress myogenic differentiation. Importantly, in vitro profiling using young and old serum in 2D culture does not capture all pathways deregulated in encapsulated cells in aged mice. Thus, in vivo transcriptomic profiling using cell encapsulation allows for the characterization of effector pathways of systemic aging with unparalleled accuracy.</p>\n\n<p> </p>", "license": { "id": "CC-BY-4.0" }, "title": "In Vivo Transcriptomic Profiling using Cell Encapsulation Identifies Effector Pathways of Systemic Aging", "journal": { "title": "BioRxiv" }, "relations": { "version": [ { "count": 1, "index": 0, "parent": { "pid_type": "recid", "pid_value": "5836935" }, "is_last": true, "last_child": { "pid_type": "recid", "pid_value": "5836936" } } ] }, "grants": [ { "code": "825825", "links": { "self": "https://zenodo.org/api/grants/10.13039/501100000780::825825" }, "title": "Unlocking Precision Gene Therapy", "acronym": "UPGRADE", "program": "H2020", "funder": { "doi": "10.13039/501100000780", "acronyms": [], "name": "European Commission", "links": { "self": "https://zenodo.org/api/funders/10.13039/501100000780" } } } ], "communities": [ { "id": "upgrade-h2020-project" } ], "publication_date": "2022-01-02", "creators": [ { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland - School of Life Sciences, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Lausanne, Switzerland", "name": "Mashinchian,\u00a0Omid" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland - Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain", "name": "Hong,\u00a0Xiaotong" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland - Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain", "name": "Michaud,\u00a0Joris" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Migliavacca,\u00a0Eugenia" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Lefebvre,\u00a0Gregory" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Boss,\u00a0Christophe" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "De Franceschi,\u00a0Filippo" }, { "affiliation": "D\u00e9partement de Pharmacologie-Physiologie, Institut de Pharmacologie de Sherbrooke, Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke, Facult\u00e9 de M\u00e9decine et des Sciences de la Sant\u00e9, Universit\u00e9 de Sherbrooke, Sherbrooke, Canada", "name": "Le Moal,\u00a0Emmeran" }, { "affiliation": "D\u00e9partement de Pharmacologie-Physiologie, Institut de Pharmacologie de Sherbrooke, Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke, Facult\u00e9 de M\u00e9decine et des Sciences de la Sant\u00e9, Universit\u00e9 de Sherbrooke, Sherbrooke, Canada", "name": "Collerette-Tremblay,\u00a0Jasmin" }, { "affiliation": "Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain", "name": "Isern,\u00a0Joan" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Metairon,\u00a0Sylviane" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Raymond,\u00a0Frederic" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Descombes,\u00a0Patrick" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland", "name": "Bouche,\u00a0Nicolas" }, { "affiliation": "Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain - Department of Experimental and Health Sciences, Pompeu Fabra University (UPF), CIBER on Neurodegenerative Diseases (CIBERNED) and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), Barcelona, Spain", "name": "Mu\u00f1oz-C\u00e1noves,\u00a0Pura" }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland - School of Life Sciences, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne (EPFL), Lausanne, Switzerland", "name": "Feige,\u00a0Jerome N." }, { "affiliation": "Nestl\u00e9 Institute of Health Science, Nestl\u00e9 Research, Soci\u00e9t\u00e9 des Produits Nestl\u00e9 S.A., Lausanne, Switzerland - D\u00e9partement de Pharmacologie-Physiologie, Institut de Pharmacologie de Sherbrooke, Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke, Facult\u00e9 de M\u00e9decine et des Sciences de la Sant\u00e9, Universit\u00e9 de Sherbrooke, Sherbrooke, Canada", "name": "Bentzinger,\u00a0C. Florian" } ], "access_right": "open", "resource_type": { "subtype": "preprint", "type": "publication", "title": "Preprint" } } }
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