Project deliverable Open Access

BioExcel Deliverable 1.2 – First project release of all pilot applications

Abraham, Mark; Ippoliti, Emiliano; Bonvin, Alexandre; de Groot, Bert; Soiland-Reyes, Stian


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  <identifier identifierType="DOI">10.5281/zenodo.574459</identifier>
  <creators>
    <creator>
      <creatorName>Abraham, Mark</creatorName>
      <givenName>Mark</givenName>
      <familyName>Abraham</familyName>
      <affiliation>KTH Royal Institute of Technology</affiliation>
    </creator>
    <creator>
      <creatorName>Ippoliti, Emiliano</creatorName>
      <givenName>Emiliano</givenName>
      <familyName>Ippoliti</familyName>
      <affiliation>Forschungszentrum Jülich</affiliation>
    </creator>
    <creator>
      <creatorName>Bonvin, Alexandre</creatorName>
      <givenName>Alexandre</givenName>
      <familyName>Bonvin</familyName>
      <affiliation>Utrecht University</affiliation>
    </creator>
    <creator>
      <creatorName>de Groot, Bert</creatorName>
      <givenName>Bert</givenName>
      <familyName>de Groot</familyName>
      <affiliation>Max Planck Institute</affiliation>
    </creator>
    <creator>
      <creatorName>Soiland-Reyes, Stian</creatorName>
      <givenName>Stian</givenName>
      <familyName>Soiland-Reyes</familyName>
      <affiliation>University of Manchester</affiliation>
    </creator>
  </creators>
  <titles>
    <title>BioExcel Deliverable 1.2 – First project release of all pilot applications</title>
  </titles>
  <publisher>Zenodo</publisher>
  <publicationYear>2017</publicationYear>
  <subjects>
    <subject>Software</subject>
    <subject>Software Engineering</subject>
    <subject>HPC</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2017-04-30</date>
  </dates>
  <resourceType resourceTypeGeneral="Text">Project deliverable</resourceType>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://zenodo.org/record/574459</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/bioexcel</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://zenodo.org/communities/ecfunded</relatedIdentifier>
  </relatedIdentifiers>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;This document describes the contents of the first project release of software&lt;br&gt;
developed for pilot applications in BioExcel. The efforts of Work Package 1 are spread over the entire project timeframe, and some collaborations, deployments or benchmarks might also use preliminary new code. However, to establish known benchmark baselines and provide reference versions of all codes used in the project (e.g. to integrate them in BioExcel workflows and use by other BioExcel teams), the Work Package also makes these formal code releases. This also comes with records describing the current status of the software that results from the planning, development, documentation, and testing processes described&lt;br&gt;
in Deliverable 1.1.&lt;/p&gt;

&lt;p&gt;The release itself takes the form of a package of Open Source licensed&lt;br&gt;
source code, and can be downloaded from the BioExcel webpage at&lt;br&gt;
http://bioexcel.eu/software/code-repositories. For most of the codes this is a&lt;br&gt;
BioExcel-specific repository to sync the releases with other project needs, while general users are usually recommended to follow the documentation, download and installation instructions available on the normal application web pages.&lt;/p&gt;</description>
  </descriptions>
  <fundingReferences>
    <fundingReference>
      <funderName>European Commission</funderName>
      <funderIdentifier funderIdentifierType="Crossref Funder ID">10.13039/501100000780</funderIdentifier>
      <awardNumber awardURI="info:eu-repo/grantAgreement/EC/H2020/675728/">675728</awardNumber>
      <awardTitle>Centre of Excellence for Biomolecular Research</awardTitle>
    </fundingReference>
  </fundingReferences>
</resource>
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