Dataset Open Access

BridgeDb: Human and SARS-related corona virus gene/protein mapping database derived from Wikidata

Kutmon, Martina; Willighagen, Egon


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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.5734440", 
  "title": "BridgeDb: Human and SARS-related corona virus gene/protein mapping database derived from Wikidata", 
  "issued": {
    "date-parts": [
      [
        2021, 
        11, 
        27
      ]
    ]
  }, 
  "abstract": "<p>Gene/Protein mappings for human and SARS-related coronaviruses. Data is derived from Wikidata. Mappings from Wikidata to NCBI Gene, RefSeq, UniProt, and&nbsp;Guide to Pharmacology Target&nbsp;are provided in the .bridge file.</p>\n\n<ul>\n\t<li>179&nbsp;Wikidata (Wd) identifiers</li>\n\t<li>82 Uniprot-TrEMBL (S) identifiers</li>\n\t<li>70 NCBI Gene (L) identifiers</li>\n\t<li>66 RefSeq (Q) identifiers</li>\n\t<li>9 Guide to Pharmacology Target&nbsp;(Gpt) identifiers</li>\n</ul>\n\n<p>Virus name was added as attribute (&quot;virus&quot;) to Wikidata Xrefs.</p>", 
  "author": [
    {
      "family": "Kutmon, Martina"
    }, 
    {
      "family": "Willighagen, Egon"
    }
  ], 
  "note": "License: Creative Commons CC0", 
  "version": "2021-11-27", 
  "type": "dataset", 
  "id": "5734440"
}
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