November 15, 2021 Software Open Access

Haimasree

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{
  "publisher": "Zenodo", 
  "DOI": "10.5281/zenodo.5703213", 
  "title": "kipoi/models: v2021-11-15", 
  "issued": {
    "date-parts": [
      [
        2021, 
        11, 
        15
      ]
    ]
  }, 
  "abstract": "What's Changed\n<ul>\n<li>Fixed folder structure for epidermal_basset by @haimasree in <a href=\"https://github.com/kipoi/models/pull/248\">https://github.com/kipoi/models/pull/248</a></li>\n<li>Fixed ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/249\">https://github.com/kipoi/models/pull/249</a></li>\n<li>SeqVec removed by @haimasree in <a href=\"https://github.com/kipoi/models/pull/250\">https://github.com/kipoi/models/pull/250</a></li>\n<li>Parallelized CI by @haimasree in <a href=\"https://github.com/kipoi/models/pull/253\">https://github.com/kipoi/models/pull/253</a></li>\n<li>Attempting to add seqvec back to ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/254\">https://github.com/kipoi/models/pull/254</a></li>\n<li>Added xpresso dataloader by @haimasree in <a href=\"https://github.com/kipoi/models/pull/255\">https://github.com/kipoi/models/pull/255</a></li>\n<li>Update model-template.yaml of Xpresso to use recent version of kipoiseq by @haimasree in <a href=\"https://github.com/kipoi/models/pull/256\">https://github.com/kipoi/models/pull/256</a></li>\n<li>Adding cython by @haimasree in <a href=\"https://github.com/kipoi/models/pull/257\">https://github.com/kipoi/models/pull/257</a></li>\n<li>Added default arguments to Xpresso's yaml representation by @haimasree in <a href=\"https://github.com/kipoi/models/pull/258\">https://github.com/kipoi/models/pull/258</a></li>\n<li>Unpin kipoi packages and upgrade python 3.5 to 3.6 by @haimasree in <a href=\"https://github.com/kipoi/models/pull/259\">https://github.com/kipoi/models/pull/259</a></li>\n<li>Fixed ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/260\">https://github.com/kipoi/models/pull/260</a></li>\n<li>Added DeepFlyBrain by @itaskiran in <a href=\"https://github.com/kipoi/models/pull/261\">https://github.com/kipoi/models/pull/261</a></li>\n<li>Fixed ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/262\">https://github.com/kipoi/models/pull/262</a></li>\n<li>Pinning deepfly dependencies by @haimasree in <a href=\"https://github.com/kipoi/models/pull/263\">https://github.com/kipoi/models/pull/263</a></li>\n<li>Fixed ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/264\">https://github.com/kipoi/models/pull/264</a></li>\n<li>Upgrading base docker image of ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/265\">https://github.com/kipoi/models/pull/265</a></li>\n<li>Machine executor added by @haimasree in <a href=\"https://github.com/kipoi/models/pull/266\">https://github.com/kipoi/models/pull/266</a></li>\n<li>Fixed date_release job by @haimasree in <a href=\"https://github.com/kipoi/models/pull/267\">https://github.com/kipoi/models/pull/267</a></li>\n<li>Add seqvec back to ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/268\">https://github.com/kipoi/models/pull/268</a></li>\n<li>Fixed kipoisplice by @haimasree in <a href=\"https://github.com/kipoi/models/pull/270\">https://github.com/kipoi/models/pull/270</a></li>\n<li>Add APARENT model by @Hoeze in <a href=\"https://github.com/kipoi/models/pull/269\">https://github.com/kipoi/models/pull/269</a></li>\n<li>Improved aparent dependencies by @haimasree in <a href=\"https://github.com/kipoi/models/pull/271\">https://github.com/kipoi/models/pull/271</a></li>\n<li>Updating preprocessing-variant-effects to reflect the current status in kipoi-veff2 intead of kipoi-veff by @haimasree in <a href=\"https://github.com/kipoi/models/pull/272\">https://github.com/kipoi/models/pull/272</a></li>\n<li>Adding resource class to machine instance by @haimasree in <a href=\"https://github.com/kipoi/models/pull/273\">https://github.com/kipoi/models/pull/273</a></li>\n<li>Fixed ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/274\">https://github.com/kipoi/models/pull/274</a></li>\n<li>Removing postprocessing field from model.yaml by @haimasree in <a href=\"https://github.com/kipoi/models/pull/275\">https://github.com/kipoi/models/pull/275</a></li>\n<li>Fixed ci by @haimasree in <a href=\"https://github.com/kipoi/models/pull/276\">https://github.com/kipoi/models/pull/276</a></li>\n<li>Adding singularity and docker container info by @haimasree in <a href=\"https://github.com/kipoi/models/pull/277\">https://github.com/kipoi/models/pull/277</a></li>\n<li>Add tests with singularity containers by @haimasree in <a href=\"https://github.com/kipoi/models/pull/278\">https://github.com/kipoi/models/pull/278</a></li>\n</ul>\n<p><strong>Full Changelog</strong>: <a href=\"https://github.com/kipoi/models/compare/v2021-06-02...v2021-11-15\">https://github.com/kipoi/models/compare/v2021-06-02...v2021-11-15</a></p>", 
  "author": [
    {
      "family": "Haimasree"
    }
  ], 
  "version": "v2021-11-15", 
  "type": "article", 
  "id": "5703213"
}