There is a newer version of this record available.

Software Open Access

cangermueller/deepcpg: Adds evaluation scripts and notebooks, improves documentation, and fixes minor bugs.

Christof Angermueller


JSON-LD (schema.org) Export

{
  "description": "<ul>\n<li>Adds <a href=\"http://deepcpg.readthedocs.io/en/latest/scripts/index.html#module-scripts.dcpg_eval_perf\">dcpg_eval_perf.py</a> and R markdown files for computing and visualizing performance metrics genome-wide and in annotated contexts.</li>\n<li>Adds <a href=\"http://deepcpg.readthedocs.io/en/latest/scripts/index.html#module-scripts.dcpg_snp\">dcpg_snp.py</a> for computing mutation effects.</li>\n<li>Adds <a href=\"https://github.com/cangermueller/deepcpg/tree/master/examples\">notebooks</a> on computing mutation effects and predicting inter-cell statistics.</li>\n<li>Adds documentation of <a href=\"http://deepcpg.readthedocs.io/latest/scripts/index.html\">DeepCpG scripts</a>.</li>\n<li>Adds integration tests.</li>\n<li>Includes minor bug-fixes.</li>\n</ul>", 
  "license": "", 
  "creator": [
    {
      "affiliation": "", 
      "@type": "Person", 
      "name": "Christof Angermueller"
    }
  ], 
  "url": "https://zenodo.org/record/570138", 
  "codeRepository": "https://github.com/cangermueller/deepcpg/tree/1.0.4", 
  "datePublished": "2017-05-01", 
  "version": "1.0.4", 
  "@context": "https://schema.org/", 
  "identifier": "https://doi.org/10.5281/zenodo.570138", 
  "@id": "https://doi.org/10.5281/zenodo.570138", 
  "@type": "SoftwareSourceCode", 
  "name": "cangermueller/deepcpg: Adds evaluation scripts and notebooks, improves documentation, and fixes minor bugs."
}
401
38
views
downloads
All versions This version
Views 40126
Downloads 385
Data volume 164.8 MB3.9 MB
Unique views 36625
Unique downloads 284

Share

Cite as