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cangermueller/deepcpg: Adds evaluation scripts and notebooks, improves documentation, and fixes minor bugs.

Christof Angermueller


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    "description": "<ul>\n<li>Adds <a href=\"http://deepcpg.readthedocs.io/en/latest/scripts/index.html#module-scripts.dcpg_eval_perf\">dcpg_eval_perf.py</a> and R markdown files for computing and visualizing performance metrics genome-wide and in annotated contexts.</li>\n<li>Adds <a href=\"http://deepcpg.readthedocs.io/en/latest/scripts/index.html#module-scripts.dcpg_snp\">dcpg_snp.py</a> for computing mutation effects.</li>\n<li>Adds <a href=\"https://github.com/cangermueller/deepcpg/tree/master/examples\">notebooks</a> on computing mutation effects and predicting inter-cell statistics.</li>\n<li>Adds documentation of <a href=\"http://deepcpg.readthedocs.io/latest/scripts/index.html\">DeepCpG scripts</a>.</li>\n<li>Adds integration tests.</li>\n<li>Includes minor bug-fixes.</li>\n</ul>", 
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