Lesson Open Access

Tutorial: Assemble a large genome using Galaxy

Syme, Anna

Tutorial: Assemble a large genome using Galaxy

By Anna Syme, Melbourne Bioinformatics, The University of Melbourne, Australian BioCommons. November 2021

Overview

  • The aim of this tutorial is to demonstrate how to assemble a large plant or animal genome using tools and workflows in Galaxy. 

  • The analysis will run with a smaller test-sized data set, but has been tested on real-sized data sets for large genomes of approximately 1 billion base pairs, or 1 Gbp. 

Prerequisites

  • The tutorial content is designed for people with some familiarity with biology, DNA sequencing and genomics, but no specific knowledge is assumed.

  • This tutorial will use the Galaxy Australia server. https://usegalaxy.org.au/ 

Files (3.1 MB)
Name Size
Large_Genome_Tutorial.pdf
md5:7941be90b7d17d3116dc84197bb1a97c
3.1 MB Download
340
155
views
downloads
All versions This version
Views 340340
Downloads 155155
Data volume 481.0 MB481.0 MB
Unique views 316316
Unique downloads 139139

Share

Cite as