Published November 6, 2021 | Version v1
Dataset Open

Sequence alignments for ITS, rpl16, and trnL-trnF

  • 1. Swedish Museum of Natural History

Description

The two data files consist of sequence alignments in FASTA format. The file 'Distichium_alignment_ITS.txt' is the alignment used for the analysis resulting in the network in Fig. 1A in the paper and the file 'Distichium_alignment_3 markers.txt' is the alignment used for the analysis resulting in the network in Fig. 1B. The GenBank numbers corresponding with the sequence numbers can be found in Appendix 1 in the paper.

Notes

The two data files consist of sequence alignments in FASTA format.

In the file 'Distichium_alignment_ITS.txt': positions 1-762 correspond with ITS and positions 764-810 with indel codings for ITS.

In the file 'Distichium_alignment_3 markers.txt': positions 1-759 correspond with ITS, positions 761-800 with indel codings for ITS; positions 802-1448 with rpl16, positions 1450-1457 with indel codings for rpl16; positions 1459-2007 with trnL-trnF, positions 2009-2015 with indel codings for trnL-trnF.

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Distichium_alignment_3_markers.txt

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