Software Open Access

NNGT 2.5.1: bugfixes, improved documentation and plots (with annotations)

Tanguy Fardet


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <datafield tag="041" ind1=" " ind2=" ">
    <subfield code="a">eng</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">nngt</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">neuron</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">network</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">graph</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">topology</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">python</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">nest</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">graph-tool</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">networkx</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">igraph</subfield>
  </datafield>
  <controlfield tag="005">20211015134837.0</controlfield>
  <controlfield tag="001">5571901</controlfield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">3651367</subfield>
    <subfield code="z">md5:50db8ecd061105f614555137d979235d</subfield>
    <subfield code="u">https://zenodo.org/record/5571901/files/nngt-2.5.1.zip</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2021-10-15</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="p">software</subfield>
    <subfield code="o">oai:zenodo.org:5571901</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="0">(orcid)0000-0001-8753-7246</subfield>
    <subfield code="a">Tanguy Fardet</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">NNGT 2.5.1: bugfixes, improved documentation and plots (with annotations)</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="u">https://opensource.org/licenses/GPL-3.0</subfield>
    <subfield code="a">GNU General Public License v3.0 only</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;This is mostly a bugfix version but it also introduces harmonic centrality support with igraph and node annotations on plots.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;New features&lt;/strong&gt;&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;Support for harmonic centrality with igraph (&lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/52aec27d2c02c629ed7ccf4ab7b15addcd918d57"&gt;52aec27d&lt;/a&gt;).&lt;/li&gt;
	&lt;li&gt;Node annotations when hovering on nodes in plots (&lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/81c7da08fea0ff5d32dba4d9c3571a6cd7bb1506"&gt;81c7da08&lt;/a&gt;)&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;&lt;strong&gt;Enhancement&lt;/strong&gt;&lt;/p&gt;

&lt;p&gt;Circular self-loops on network plots (&lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/81c7da08fea0ff5d32dba4d9c3571a6cd7bb1506"&gt;81c7da08&lt;/a&gt;).&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;Bugfixes&lt;/strong&gt;&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;Fix curved edges and sizes (&lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/81c7da08fea0ff5d32dba4d9c3571a6cd7bb1506"&gt;81c7da08&lt;/a&gt;)&lt;/li&gt;
	&lt;li&gt;improved spatial support (to_undirected and Graph init, &lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/e83fd6a4faa12c9fe4fd111d57d393d43ab3fa14"&gt;e83fd6a4&lt;/a&gt;)&lt;/li&gt;
	&lt;li&gt;Fix spectral radius for unweighted graphs (&lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/f2dc429c7770e3a8e5f7a0c1c107c05bfe9458d2"&gt;f2dc429c&lt;/a&gt;)&lt;/li&gt;
	&lt;li&gt;Fix save_spikes and receptor port support with NEST (&lt;a href="https://git.sr.ht/~tfardet/NNGT/commit/f2dc429c7770e3a8e5f7a0c1c107c05bfe9458d2"&gt;f2dc429c&lt;/a&gt;)&lt;/li&gt;
&lt;/ul&gt;</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">url</subfield>
    <subfield code="i">isDerivedFrom</subfield>
    <subfield code="a">https://git.sr.ht/~tfardet/NNGT</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">url</subfield>
    <subfield code="i">isReferencedBy</subfield>
    <subfield code="a">https://nngt.readthedocs.io/en/v2.5.1</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="n">doi</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="a">10.5281/zenodo.3402493</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.5281/zenodo.5571901</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">software</subfield>
  </datafield>
</record>
435
49
views
downloads
All versions This version
Views 43516
Downloads 493
Data volume 68.4 MB11.0 MB
Unique views 36514
Unique downloads 252

Share

Cite as