Dataset Open Access
Ryan, Devon; Wolff, Joachim
{ "description": "<p>This dataset is based on data from the publication \"Hierarchical Clustering of Breast Cancer Methylomes Revealed Differentially Methylated and Expressed Breast Cancer Genes\" (10.1371/journal.pone.0118453). It is a subset to use it as training material for a methyl-seq Galaxy course.</p>\n\n<p>\u00a0</p>\n\n<p>Thanks for the friendly permission from\u00a0I-Hsuan Lin to use it.\u00a0</p>", "license": "https://creativecommons.org/licenses/by/4.0/legalcode", "creator": [ { "affiliation": "Creater of the subdataset to use it as Galaxy training material", "@type": "Person", "name": "Ryan, Devon" }, { "affiliation": "Creater of the subdataset to use it as Galaxy training material", "@type": "Person", "name": "Wolff, Joachim" } ], "url": "https://zenodo.org/record/557099", "datePublished": "2017-04-24", "keywords": [ "Methyl-seq", "Galaxy", "Freiburg", "breast cancer" ], "@context": "https://schema.org/", "distribution": [ { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/BT089_CpG.meth.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/BT089_CpG.meth_ucsc.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/BT126_CpG.meth.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/BT126_CpG.meth_ucsc.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/BT198_CpG.meth.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/BT198_CpG.meth_ucsc.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/CpGIslands.bed", "encodingFormat": "bed", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/MCF7_CpG.meth.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/MCF7_CpG.meth_ucsc.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/NB1_CpG.meth.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/NB1_CpG.meth_ucsc.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/NB2_CpG.meth.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/NB2_CpG.meth_ucsc.bedGraph", "encodingFormat": "bedgraph", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/subset_1.fastq", "encodingFormat": "fastq", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/subset_2.fastq", "encodingFormat": "fastq", "@type": "DataDownload" }, { "contentUrl": "https://zenodo.org/api/files/ab7dc7ee-d1dd-48fe-bfc4-ca67f4683c72/aligned_subset.bam", "encodingFormat": "bam", "@type": "DataDownload" } ], "identifier": "https://doi.org/10.5281/zenodo.557099", "@id": "https://doi.org/10.5281/zenodo.557099", "@type": "Dataset", "name": "MethylSeq_2017" }
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Data volume | 982.7 GB | 982.7 GB |
Unique views | 7,656 | 7,658 |
Unique downloads | 1,089 | 1,089 |