Software Open Access

shogun-toolbox/shogun: Shogun 6.0.0 - Baba Nobuharu

Soeren Sonnenburg; Heiko Strathmann; Sergey Lisitsyn; Viktor Gal; Fernando J. Iglesias García; Wu Lin; Soumyajit De; Chiyuan Zhang; frx; tklein23; Evgeniy Andreev; JonasBehr; sploving; Parijat Mazumdar; Christian Widmer; Pan Deng / Zora; Saurabh Mahindre; Abhijeet Kislay; Kevin Hughes; Roman Votyakov; khalednasr; Sanuj Sharma; Alesis Novik; Abinash Panda; Evangelos Anagnostopoulos; Liang Pang; Alex Binder; serialhex; Esben Sørig; Björn Esser


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&lt;li&gt;Add native MS Windows support [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Shogun requires the compiler to support C++11 features&lt;/li&gt;
&lt;li&gt;Shogun cloud online: Jupyter notebook with Shogun from the browser, &lt;a href="https://cloud.shogun.ml"&gt;https://cloud.shogun.ml&lt;/a&gt;&lt;/li&gt;
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Features
&lt;ul&gt;
&lt;li&gt;LDA now supports 32, 64 and 128 bit floating point numbers [Chris Goldsworthy]&lt;/li&gt;
&lt;li&gt;Add SHOGUN_NUM_THREADS enviroment variable to control the number of threads
used by the models in runtime [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Added Scala Interface to the build [Abhinav Rai]&lt;/li&gt;
&lt;li&gt;Major re-writing and API changes in kernel statistical hypothesis
testing framework, significant speed up in permutation test for
quadratic time MMD, new kernel selection algorithms for quadratic time MMD [Soumyajit De]
### Bugfixes:&lt;ul&gt;
&lt;li&gt;Fix build error of R interface for R&amp;gt;=3.3.0, #3460 [Heiko Strathmann]&lt;/li&gt;
&lt;li&gt;Make the code compatible with Eigen 3.3.0 [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Fix number of CPUs detected on Linux [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Fix multi-threading in KMeansBase [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Make ExponentialARDKernel thread-safe [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Make PRNG thread-safe [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Fix python interface when using libshogun compiled with OpenMP [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Fix CART to work with cross-validation [Fernando Iglesias]
### Cleanup, efficiency updates, and API Changes:&lt;/li&gt;
&lt;li&gt;Port multi-threading to use OpenMP backend in Kernel [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Fix false sharing in EuclideanDistance [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Fix out of source build of the whole project [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Add LIBSHOGUN cmake flag to turn off libshogun compilation [Viktor Gal]&lt;/li&gt;
&lt;li&gt;Export Shogun target with cmake to enable to build modular interfaces to a
pre-compiled libshogun on the system without requiring to compile
libshogun itself [Viktor Gal]
### Notes&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;li&gt;Contains major rewrite and clean-up of developer documentation in doc/readme [Heiko Strathmann, Lea Götz]&lt;/li&gt;
&lt;li&gt;Known issue: Octave multithreaded crashes, currently bindings are initialized single-threaded, &lt;a href="https://github.com/shogun-toolbox/shogun/issues/3772"&gt;https://github.com/shogun-toolbox/shogun/issues/3772&lt;/a&gt; [Heiko Strathman
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