Software Open Access

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

David LeBauer; Michael Dietze; Rob Kooper; Alexey Shiklomanov; Betsy Cowdery; Istem Fer; Anthony Gardella; Ben Bond-Lamberty; Shawn P. Serbin; Ann Raiho; Anne Thomas; Chris Black; James Simkins; Ankur Desai; Joshua Mantooth; Aman Kumar; Liam Burke; Afshin Pourmokhtarian; Christy Rollinson; Shubham Agarwal; Brady Hardiman; Martin De Kauwe; Eugene; Tess McCabe; Katie Ragosta; Tony Cohen; zhangwenx; Tony Viskari; Yan Zhao; Jing Xia


JSON-LD (schema.org) Export

{
  "description": "The Predictive Ecosystem Analyzer (PEcAn) (see pecanproject.org) is an integrated ecological bioinformatics toolbox (Dietze et al 2013, LeBauer et al, 2013) that consists of: 1) a scientific workflow system to manage the immense amounts of publicly-available environmental data and 2) a Bayesian data assimilation system to synthesize this information within state-of-the-art ecosystems models. This project is motivated by the fact that many of the most pressing questions about global change are not necessarily limited by the need to collect new data as much as by our ability to synthesize existing data. This project seeks to improve this ability by developing a accessibe framework for integrating multiple data sources in a sensible manner.", 
  "license": "https://opensource.org/licenses/NCSA", 
  "creator": [
    {
      "affiliation": "University of Arizona", 
      "@id": "https://orcid.org/0000-0001-7228-053X", 
      "@type": "Person", 
      "name": "David LeBauer"
    }, 
    {
      "affiliation": "Boston University", 
      "@id": "https://orcid.org/0000-0002-2324-2518", 
      "@type": "Person", 
      "name": "Michael Dietze"
    }, 
    {
      "affiliation": "National Center for Supercomputing Applications", 
      "@id": "https://orcid.org/0000-0002-5781-7287", 
      "@type": "Person", 
      "name": "Rob Kooper"
    }, 
    {
      "affiliation": "Boston University", 
      "@id": "https://orcid.org/0000-0003-4022-5979", 
      "@type": "Person", 
      "name": "Alexey Shiklomanov"
    }, 
    {
      "affiliation": "Boston University", 
      "@id": "https://orcid.org/0000-0002-6538-6296", 
      "@type": "Person", 
      "name": "Betsy Cowdery"
    }, 
    {
      "affiliation": "Boston Univeristy", 
      "@id": "https://orcid.org/0000-0001-8236-303X", 
      "@type": "Person", 
      "name": "Istem Fer"
    }, 
    {
      "affiliation": "Boston Univeristy", 
      "@id": "https://orcid.org/0000-0003-4380-3412", 
      "@type": "Person", 
      "name": "Anthony Gardella"
    }, 
    {
      "affiliation": "Pacific Northwest National Laboratory / University of Maryland", 
      "@id": "https://orcid.org/0000-0001-9525-4633", 
      "@type": "Person", 
      "name": "Ben Bond-Lamberty"
    }, 
    {
      "affiliation": "Brookhaven National Laboratory", 
      "@id": "https://orcid.org/0000-0003-4136-8971", 
      "@type": "Person", 
      "name": "Shawn P. Serbin"
    }, 
    {
      "affiliation": "University of Notre Dame", 
      "@type": "Person", 
      "name": "Ann Raiho"
    }, 
    {
      "affiliation": "Brigham Young University", 
      "@type": "Person", 
      "name": "Anne Thomas"
    }, 
    {
      "affiliation": "Pennsylvania State University", 
      "@id": "https://orcid.org/0000-0001-8382-298X", 
      "@type": "Person", 
      "name": "Chris Black"
    }, 
    {
      "affiliation": "University of Wisconsin-Madison", 
      "@type": "Person", 
      "name": "James Simkins"
    }, 
    {
      "affiliation": "University of Wisconsin-Madison", 
      "@id": "https://orcid.org/0000-0002-5226-6041", 
      "@type": "Person", 
      "name": "Ankur Desai"
    }, 
    {
      "affiliation": "Worchester Academy", 
      "@type": "Person", 
      "name": "Joshua Mantooth"
    }, 
    {
      "@type": "Person", 
      "name": "Aman Kumar"
    }, 
    {
      "affiliation": "Boston University", 
      "@type": "Person", 
      "name": "Liam Burke"
    }, 
    {
      "affiliation": "Boston University", 
      "@type": "Person", 
      "name": "Afshin Pourmokhtarian"
    }, 
    {
      "affiliation": "Morton Arboretum", 
      "@type": "Person", 
      "name": "Christy Rollinson"
    }, 
    {
      "@type": "Person", 
      "name": "Shubham Agarwal"
    }, 
    {
      "affiliation": "Purdue University", 
      "@type": "Person", 
      "name": "Brady Hardiman"
    }, 
    {
      "affiliation": "University of New South Wales", 
      "@id": "https://orcid.org/0000-0002-3399-9098", 
      "@type": "Person", 
      "name": "Martin De Kauwe"
    }, 
    {
      "@type": "Person", 
      "name": "Eugene"
    }, 
    {
      "affiliation": "Boston University", 
      "@type": "Person", 
      "name": "Tess McCabe"
    }, 
    {
      "affiliation": "Boston University", 
      "@type": "Person", 
      "name": "Katie Ragosta"
    }, 
    {
      "@type": "Person", 
      "name": "Tony Cohen"
    }, 
    {
      "@type": "Person", 
      "name": "zhangwenx"
    }, 
    {
      "affiliation": "Finnish Meteorological Institute", 
      "@type": "Person", 
      "name": "Tony Viskari"
    }, 
    {
      "@type": "Person", 
      "name": "Yan Zhao"
    }, 
    {
      "affiliation": "University of Illinois at Urbana-Champaign", 
      "@type": "Person", 
      "name": "Jing Xia"
    }
  ], 
  "url": "https://zenodo.org/record/5557914", 
  "codeRepository": "https://github.com/PecanProject/pecan/tree/v1.7.2", 
  "datePublished": "2021-10-08", 
  "version": "v1.7.2", 
  "@context": "https://schema.org/", 
  "identifier": "https://doi.org/10.5281/zenodo.5557914", 
  "@id": "https://doi.org/10.5281/zenodo.5557914", 
  "@type": "SoftwareSourceCode", 
  "name": "The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox."
}
377
35
views
downloads
All versions This version
Views 37792
Downloads 358
Data volume 1.5 GB492.6 MB
Unique views 32384
Unique downloads 248

Share

Cite as