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Data for publication: Autoadaptive motion modelling for MR-based respiratory motion estimation

Baumgartner, Christian F.; Kolbitsch, Christoph; McClelland, Jamie R.; Rueckert, Daniel; King, Andrew P.


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    <subfield code="a">Baumgartner, Christian F.</subfield>
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    <subfield code="a">Data for publication: Autoadaptive motion modelling for MR-based respiratory motion estimation</subfield>
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    <subfield code="a">&lt;p&gt;This repository contains four&amp;nbsp;T1-weighted&amp;nbsp;2D MR slice datasets&amp;nbsp;from multiple slice positions covering the entire thorax during free breathing and breath holds.&amp;nbsp;&amp;nbsp;The data was used to evaluate our novel autoadaptive respiratory motion model which we proposed in [1]. In particular, the datasets contain the following:&lt;/p&gt;

&lt;ol&gt;
	&lt;li&gt;Acquisition of all sagittal slice positions covering the thorax&amp;nbsp;and one coronal slice position acquired during a breath hold.&lt;/li&gt;
	&lt;li&gt;Results of registration between adjacent sagittal slice positions [control point displacements (cpp) and displacement fields (dfs)]&lt;/li&gt;
	&lt;li&gt;40 dynamic acquisitions of each slice position also present in the breath-hold acquired during free breathing.&amp;nbsp;&lt;/li&gt;
	&lt;li&gt;Results of registration of the dynamic acquisitions to the respective&amp;nbsp;breath-holds slices (cpp&amp;#39;s and dfs&amp;#39;s).&amp;nbsp;&lt;/li&gt;
&lt;/ol&gt;

&lt;p&gt;The data is divided into 4 zip files, each containing the data of one volunteer. The folder structure for each is as follows:&lt;/p&gt;

&lt;blockquote&gt;
&lt;p&gt;|-- bhs (breath hold data)&lt;br /&gt;
| &amp;nbsp; |-- images (images)&lt;br /&gt;
| &amp;nbsp; | &amp;nbsp; |-- cor&lt;br /&gt;
| &amp;nbsp; | &amp;nbsp; `-- sag&lt;br /&gt;
| &amp;nbsp; `-- mfs_slpos2slpos (registration results)&lt;br /&gt;
| &amp;nbsp; &amp;nbsp; &amp;nbsp; `-- sag&lt;br /&gt;
`-- dyn (dynamic free-breathing data)&lt;br /&gt;
&amp;nbsp; &amp;nbsp; |-- images (images)&lt;br /&gt;
&amp;nbsp; &amp;nbsp; | &amp;nbsp; |-- cor&lt;br /&gt;
&amp;nbsp; &amp;nbsp; | &amp;nbsp; `-- sag&lt;br /&gt;
&amp;nbsp; &amp;nbsp; `-- mfs_tpos2tpos (registration results)&lt;br /&gt;
&amp;nbsp; &amp;nbsp; &amp;nbsp; &amp;nbsp; |-- cor&lt;br /&gt;
&amp;nbsp; &amp;nbsp; &amp;nbsp; &amp;nbsp; `-- sag&lt;/p&gt;
&lt;/blockquote&gt;

&lt;p&gt;Please, see our publication [1] for details on the acquisition sequence and registration&amp;nbsp;used.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;--&lt;/p&gt;

&lt;p&gt;[1]: CF Baumgartner, C Kolbitsch, JR McClelland, D Rueckert, AP King, &lt;em&gt;Autoadaptive motion modelling for MR-based respiratory motion estimation&lt;/em&gt;, Medical Image Analysis (2016),&amp;nbsp;http://dx.doi.org/10.1016/j.media.2016.06.005&lt;/p&gt;</subfield>
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