Software Open Access
LayNii: A software suite for layer-fMRI
Huber, Laurentius;
Benedikt, Poser;
Bandettini, Peter;
Arora, Kabir;
Wagstyl, Konrad;
Cho, Shinho;
Goense, Jozien;
Nothnagel, Nils;
Morgan, Andrew Tyler;
van den Hurk, Job;
Müller, Anna Katharina;
Reynolds, Richard;
Glen, Daniel;
Goebel, Rainer;
Gulban, Omer Faruk
LN2_GEODISTANCES to measure geodesic distances in a set of voxels from another set of voxels.
LN2_IFPOINTS is a simplified (and more general) version of the iterative farthest points algorithm used in LN2_COLUMNS.
LN2_MASK is intended to help with voxel section for layer-profile extraction.
LN2_BORDERIZE is introduced to find borders in an integer nifti (e.g. segmentation files, rim files).
LN2_MULTILATERATE algorithm is significantly improved through using pin axis geodesic distances rather than point based geodesic distances.
LN2_LAYERS now have a very minimal masked smoothing applied to the equivolume and equidistance metrics. This is done to mitigate the discrete sampling effects present close to the borders.
LN2_PATCH_FLATTEN minor improvements.
| Name | Size | |
|---|---|---|
|
layerfMRI/LAYNII-v2.1.1.zip
md5:d6e482aa2afef8c94f428a33b1dfe841 |
80.3 MB | Download |
| All versions | This version | |
|---|---|---|
| Views | 948 | 82 |
| Downloads | 115 | 14 |
| Data volume | 5.8 GB | 1.1 GB |
| Unique views | 596 | 60 |
| Unique downloads | 97 | 13 |
Indexed in
- Publication date:
- July 16, 2021
- DOI:
-
- Related identifiers:
- Supplement to
- License (for files):
- Other (Open)