September 20, 2021 Dataset Open Access

de Almeida, Bernardo P

MARC21 XML Export

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    <subfield code="a">&lt;p&gt;This repository holds the&amp;nbsp;trained DeepSTARR model&amp;nbsp;and the data&amp;nbsp;used to train and evaluate the model.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;Files:&lt;/strong&gt;&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;&lt;strong&gt;&amp;lt;set&amp;gt;.fa&lt;/strong&gt;

	&lt;ul&gt;
		&lt;li&gt;FASTA files with DNA sequences of genomic regions from train/val/test sets.&lt;/li&gt;
	&lt;/ul&gt;
	&lt;/li&gt;
	&lt;li&gt;&lt;strong&gt;&amp;lt;set&amp;gt;*.txt&lt;/strong&gt;
	&lt;ul&gt;
		&lt;li&gt;Files with developmental and housekeeping activity of genomic regions from train/val/test sets.&lt;/li&gt;
	&lt;/ul&gt;
	&lt;/li&gt;
	&lt;li&gt;&lt;strong&gt;DeepSTARR.model.h5 &lt;/strong&gt;and&lt;strong&gt;&amp;nbsp;DeepSTARR.model.json&lt;/strong&gt;
	&lt;ul&gt;
		&lt;li&gt;DeepSTARR Keras model&lt;/li&gt;
	&lt;/ul&gt;
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